RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
LINC00474-201ENST00000374014 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
LINC00474-201ENST00000374014 NLRP6P59044 892 aa12.07□□□□□ -0.48
LINC00474-201ENST00000374014 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
LINC00474-201ENST00000374014 VARS2Q5ST30 1063 aaKnown RBP12.04□□□□□ -0.48
LINC00474-201ENST00000374014 GPR153Q6NV75 609 aa12.04□□□□□ -0.48
LINC00474-201ENST00000374014 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
LINC00474-201ENST00000374014 MFRPQ9BY79 579 aa12□□□□□ -0.49
LINC00474-201ENST00000374014 STK25O00506 426 aa11.99□□□□□ -0.49
LINC00474-201ENST00000374014 ECM2O94769 699 aaPredicted RBP11.99□□□□□ -0.49
LINC00474-201ENST00000374014 ZNF687Q8N1G0 1237 aa11.97□□□□□ -0.49
LINC00474-201ENST00000374014 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
LINC00474-201ENST00000374014 PKD2Q13563 968 aa11.91□□□□□ -0.5
LINC00474-201ENST00000374014 KIF3CO14782 793 aa11.9□□□□□ -0.5
LINC00474-201ENST00000374014 RGL2O15211 777 aa11.9□□□□□ -0.5
LINC00474-201ENST00000374014 KHSRPQ92945 711 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC00474-201ENST00000374014 C2orf72A6NCS6 295 aa11.89□□□□□ -0.51
LINC00474-201ENST00000374014 RNF166Q96A37 237 aaPredicted RBP11.89□□□□□ -0.51
LINC00474-201ENST00000374014 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
LINC00474-201ENST00000374014 MYT1LQ9UL68 1186 aa11.86□□□□□ -0.51
LINC00474-201ENST00000374014 SLC34A2O95436 690 aa11.8□□□□□ -0.52
LINC00474-201ENST00000374014 NUDT7P0C024 238 aa11.8□□□□□ -0.52
LINC00474-201ENST00000374014 PTGER2P43116 358 aa11.8□□□□□ -0.52
LINC00474-201ENST00000374014 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
LINC00474-201ENST00000374014 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
LINC00474-201ENST00000374014 PPP1R37O75864 691 aa11.78□□□□□ -0.52
LINC00474-201ENST00000374014 PCDHGA4Q9Y5G9 962 aa11.77□□□□□ -0.53
LINC00474-201ENST00000374014 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00474-201ENST00000374014 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
LINC00474-201ENST00000374014 PBX2P40425 430 aa11.73□□□□□ -0.53
LINC00474-201ENST00000374014 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
LINC00474-201ENST00000374014 AXIN2Q9Y2T1 843 aa11.68□□□□□ -0.54
LINC00474-201ENST00000374014 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
LINC00474-201ENST00000374014 PTCD2Q8WV60 388 aaKnown RBP11.64□□□□□ -0.55
LINC00474-201ENST00000374014 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
LINC00474-201ENST00000374014 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
LINC00474-201ENST00000374014 FOXK1P85037 733 aa11.63□□□□□ -0.55
LINC00474-201ENST00000374014 PLPP6Q8IY26 295 aa11.61□□□□□ -0.55
LINC00474-201ENST00000374014 GPHNQ9NQX3 736 aaPredicted RBP11.61□□□□□ -0.55
LINC00474-201ENST00000374014 ARHGAP33O14559 1287 aa11.6□□□□□ -0.55
LINC00474-201ENST00000374014 CHGAP10645 457 aaKnown RBP11.57□□□□□ -0.56
LINC00474-201ENST00000374014 DSG2Q14126 1118 aa11.57□□□□□ -0.56
LINC00474-201ENST00000374014 ADGRD1Q6QNK2 874 aa11.57□□□□□ -0.56
LINC00474-201ENST00000374014 TBC1D12O60347 775 aa11.54□□□□□ -0.56
LINC00474-201ENST00000374014 TK2O00142 265 aa11.51□□□□□ -0.57
LINC00474-201ENST00000374014 PSEN2P49810 448 aa11.51□□□□□ -0.57
LINC00474-201ENST00000374014 NKX1-1Q15270 411 aaPredicted RBP11.51□□□□□ -0.57
LINC00474-201ENST00000374014 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
LINC00474-201ENST00000374014 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
LINC00474-201ENST00000374014 DNAJC5Q9H3Z4 198 aa11.51□□□□□ -0.57
LINC00474-201ENST00000374014 HCSTQ9UBK5 93 aa11.5□□□□□ -0.57
LINC00474-201ENST00000374014 HRO43593 1189 aa11.48□□□□□ -0.57
LINC00474-201ENST00000374014 RYDENQ9NUL5 291 aaKnown RBP11.47□□□□□ -0.57
LINC00474-201ENST00000374014 OXER1Q8TDS5 423 aa11.46□□□□□ -0.57
LINC00474-201ENST00000374014 PLA2G2EQ9NZK7 142 aa11.45□□□□□ -0.58
LINC00474-201ENST00000374014 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
LINC00474-201ENST00000374014 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00474-201ENST00000374014 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
LINC00474-201ENST00000374014 KCNH8Q96L42 1107 aa11.41□□□□□ -0.58
LINC00474-201ENST00000374014 PPP1R15BQ5SWA1 713 aa11.4□□□□□ -0.58
LINC00474-201ENST00000374014 STAC3Q96MF2 364 aa11.4□□□□□ -0.58
LINC00474-201ENST00000374014 ZNF454Q8N9F8 522 aa11.38□□□□□ -0.59
LINC00474-201ENST00000374014 KCTD12Q96CX2 325 aaKnown RBP11.38□□□□□ -0.59
LINC00474-201ENST00000374014 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
LINC00474-201ENST00000374014 PDE4AP27815 886 aa11.36□□□□□ -0.59
LINC00474-201ENST00000374014 VPS9D1Q9Y2B5 631 aa11.36□□□□□ -0.59
LINC00474-201ENST00000374014 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
LINC00474-201ENST00000374014 FOSBP53539 338 aa11.33□□□□□ -0.6
LINC00474-201ENST00000374014 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
LINC00474-201ENST00000374014 SLC4A5Q9BY07 1137 aa11.32□□□□□ -0.6
LINC00474-201ENST00000374014 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
LINC00474-201ENST00000374014 PTPREP23469 700 aa11.3□□□□□ -0.6
LINC00474-201ENST00000374014 LARP6Q9BRS8 491 aaKnown RBP11.29□□□□□ -0.6
LINC00474-201ENST00000374014 EVI5O60447 810 aa11.28□□□□□ -0.6
LINC00474-201ENST00000374014 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
LINC00474-201ENST00000374014 DDX27Q96GQ7 796 aaKnown RBP11.27□□□□□ -0.61
LINC00474-201ENST00000374014 BHMG1C9JSJ3 638 aaPredicted RBP11.26□□□□□ -0.61
LINC00474-201ENST00000374014 PTPN5P54829 565 aa11.26□□□□□ -0.61
LINC00474-201ENST00000374014 ZBED2Q9BTP6 218 aa11.26□□□□□ -0.61
LINC00474-201ENST00000374014 MFSD10Q14728 455 aa11.24□□□□□ -0.61
LINC00474-201ENST00000374014 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
LINC00474-201ENST00000374014 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
LINC00474-201ENST00000374014 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
LINC00474-201ENST00000374014 THSD4Q6ZMP0 1018 aa11.21□□□□□ -0.61
LINC00474-201ENST00000374014 GOLGA8CPA6NN73 597 aa11.2□□□□□ -0.62
LINC00474-201ENST00000374014 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
LINC00474-201ENST00000374014 EMILIN3Q9NT22 766 aa11.2□□□□□ -0.62
LINC00474-201ENST00000374014 WNT2BQ93097 391 aa11.18□□□□□ -0.62
LINC00474-201ENST00000374014 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
LINC00474-201ENST00000374014 NBPF3Q9H094 633 aa11.16□□□□□ -0.62
LINC00474-201ENST00000374014 PCDHGA10Q9Y5H3 936 aa11.16□□□□□ -0.62
LINC00474-201ENST00000374014 NISCHQ9Y2I1 1504 aa11.15□□□□□ -0.62
LINC00474-201ENST00000374014 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
LINC00474-201ENST00000374014 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
LINC00474-201ENST00000374014 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
LINC00474-201ENST00000374014 RABGEF1Q9UJ41 708 aa11.11□□□□□ -0.63
LINC00474-201ENST00000374014 PHF14O94880 888 aa11.1□□□□□ -0.63
LINC00474-201ENST00000374014 PROX2Q3B8N5 592 aa11.1□□□□□ -0.63
LINC00474-201ENST00000374014 TYW1BQ6NUM6 668 aa11.1□□□□□ -0.63
LINC00474-201ENST00000374014 FBXW7Q969H0 707 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms