RNA–Protein interactions for RNA: ENST00000374000.8

PHF20-202, Transcript of PHD finger protein 20, humanhuman

TSL 1 (best)

Gene PHF20, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-202ENST00000374000 SCAPERQ9BY12 1400 aa19.29■□□□□ 0.68
PHF20-202ENST00000374000 PLCH2O75038 1416 aa19.27■□□□□ 0.67
PHF20-202ENST00000374000 ARHGEF12Q9NZN5 1544 aa19.26■□□□□ 0.67
PHF20-202ENST00000374000 CEBPAP49715 358 aaPredicted RBP19.25■□□□□ 0.67
PHF20-202ENST00000374000 ATP10AO60312 1499 aa19.24■□□□□ 0.67
PHF20-202ENST00000374000 EEA1Q15075 1411 aa19.23■□□□□ 0.67
PHF20-202ENST00000374000 C9orf84Q5VXU9 1444 aa19.22■□□□□ 0.67
PHF20-202ENST00000374000 ILDR2Q71H61 639 aa19.2■□□□□ 0.66
PHF20-202ENST00000374000 PREX1Q8TCU6 1659 aa19.2■□□□□ 0.66
PHF20-202ENST00000374000 EFCAB2Q5VUJ9 269 aa19.17■□□□□ 0.66
PHF20-202ENST00000374000 STRCQ7RTU9 1775 aa19.17■□□□□ 0.66
PHF20-202ENST00000374000 DISP3Q9P2K9 1392 aa19.16■□□□□ 0.66
PHF20-202ENST00000374000 AFAP1Q8N556 730 aa19.14■□□□□ 0.65
PHF20-202ENST00000374000 ATP1B4Q9UN42 357 aaPredicted RBP19.14■□□□□ 0.65
PHF20-202ENST00000374000 MYO5CQ9NQX4 1742 aa19.14■□□□□ 0.65
PHF20-202ENST00000374000 KIF14Q15058 1648 aa19.14■□□□□ 0.65
PHF20-202ENST00000374000 ZNF518AQ6AHZ1 1483 aa19.12■□□□□ 0.65
PHF20-202ENST00000374000 UHRF1BP1Q6BDS2 1440 aa19.12■□□□□ 0.65
PHF20-202ENST00000374000 KDM5CP41229 1560 aa19.11■□□□□ 0.65
PHF20-202ENST00000374000 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
PHF20-202ENST00000374000 DIP2CQ9Y2E4 1556 aa19.1■□□□□ 0.65
PHF20-202ENST00000374000 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
PHF20-202ENST00000374000 ARHGAP5Q13017 1502 aa19.09■□□□□ 0.65
PHF20-202ENST00000374000 FMN1Q68DA7 1419 aa19.08■□□□□ 0.64
PHF20-202ENST00000374000 ARHGAP35Q9NRY4 1499 aa19.08■□□□□ 0.64
PHF20-202ENST00000374000 SOCS7O14512 581 aa19.07■□□□□ 0.64
PHF20-202ENST00000374000 TROQ12816 1431 aaPredicted RBP19.07■□□□□ 0.64
PHF20-202ENST00000374000 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
PHF20-202ENST00000374000 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
PHF20-202ENST00000374000 ABCA6Q8N139 1617 aa19.05■□□□□ 0.64
PHF20-202ENST00000374000 PTPRTO14522 1441 aa19.05■□□□□ 0.64
PHF20-202ENST00000374000 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
PHF20-202ENST00000374000 C3P01024 1663 aa19.04■□□□□ 0.64
PHF20-202ENST00000374000 SETD1BQ9UPS6 1966 aaKnown RBP19.03■□□□□ 0.64
PHF20-202ENST00000374000 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.64
PHF20-202ENST00000374000 MLH3Q9UHC1 1453 aa19.02■□□□□ 0.64
PHF20-202ENST00000374000 TRAPPC8Q9Y2L5 1435 aa19.02■□□□□ 0.64
PHF20-202ENST00000374000 LTBP4Q8N2S1 1624 aa19.02■□□□□ 0.64
PHF20-202ENST00000374000 LRRIQ1Q96JM4 1722 aa19.01■□□□□ 0.63
PHF20-202ENST00000374000 CLIP1P30622 1438 aa19■□□□□ 0.63
PHF20-202ENST00000374000 SPATA31D1Q6ZQQ2 1576 aa19■□□□□ 0.63
PHF20-202ENST00000374000 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
PHF20-202ENST00000374000 AGLP35573 1532 aa19■□□□□ 0.63
PHF20-202ENST00000374000 ABCC1P33527 1531 aa18.98■□□□□ 0.63
PHF20-202ENST00000374000 NCOA1Q15788 1441 aa18.97■□□□□ 0.63
PHF20-202ENST00000374000 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
PHF20-202ENST00000374000 PREX2Q70Z35 1606 aa18.94■□□□□ 0.62
PHF20-202ENST00000374000 ITSN2Q9NZM3 1697 aa18.94■□□□□ 0.62
PHF20-202ENST00000374000 KIDINS220Q9ULH0 1771 aa18.94■□□□□ 0.62
PHF20-202ENST00000374000 IQSEC2Q5JU85 1478 aa18.92■□□□□ 0.62
PHF20-202ENST00000374000 CNTLNQ9NXG0 1405 aa18.92■□□□□ 0.62
PHF20-202ENST00000374000 CAMSAP1Q5T5Y3 1602 aa18.9■□□□□ 0.62
PHF20-202ENST00000374000 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
PHF20-202ENST00000374000 SAMD9LQ8IVG5 1584 aa18.87■□□□□ 0.61
PHF20-202ENST00000374000 NPATQ14207 1427 aa18.87■□□□□ 0.61
PHF20-202ENST00000374000 ZMYM3Q14202 1370 aa18.86■□□□□ 0.61
PHF20-202ENST00000374000 ZNF335Q9H4Z2 1342 aaPredicted RBP18.86■□□□□ 0.61
PHF20-202ENST00000374000 CASKIN1Q8WXD9 1431 aa18.86■□□□□ 0.61
PHF20-202ENST00000374000 CDC42BPAQ5VT25 1732 aa18.86■□□□□ 0.61
PHF20-202ENST00000374000 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
PHF20-202ENST00000374000 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
PHF20-202ENST00000374000 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
PHF20-202ENST00000374000 SYCP2Q9BX26 1530 aa18.83■□□□□ 0.6
PHF20-202ENST00000374000 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
PHF20-202ENST00000374000 HNRNPMP52272 730 aaKnown RBP eCLIP18.81■□□□□ 0.67e-7■■■■□ 24.4
PHF20-202ENST00000374000 SPAG9O60271 1321 aaKnown RBP18.81■□□□□ 0.6
PHF20-202ENST00000374000 SUPT6HQ7KZ85 1726 aaKnown RBP18.81■□□□□ 0.6
PHF20-202ENST00000374000 GPATCH8Q9UKJ3 1502 aaKnown RBP18.8■□□□□ 0.6
PHF20-202ENST00000374000 MYO3AQ8NEV4 1616 aa18.79■□□□□ 0.6
PHF20-202ENST00000374000 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
PHF20-202ENST00000374000 CLTCQ00610 1675 aaKnown RBP18.79■□□□□ 0.6
PHF20-202ENST00000374000 PLA2R1Q13018 1463 aa18.78■□□□□ 0.6
PHF20-202ENST00000374000 TCOF1Q13428 1488 aaKnown RBP18.78■□□□□ 0.6
PHF20-202ENST00000374000 ATP7AQ04656 1500 aa18.77■□□□□ 0.6
PHF20-202ENST00000374000 ZNF142P52746 1687 aaPredicted RBP18.77■□□□□ 0.6
PHF20-202ENST00000374000 PLXNC1O60486 1568 aa18.77■□□□□ 0.6
PHF20-202ENST00000374000 PKD2Q13563 968 aa18.77■□□□□ 0.59
PHF20-202ENST00000374000 CEP170BQ9Y4F5 1589 aaPredicted RBP18.77■□□□□ 0.59
PHF20-202ENST00000374000 A2MP01023 1474 aa18.76■□□□□ 0.59
PHF20-202ENST00000374000 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
PHF20-202ENST00000374000 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
PHF20-202ENST00000374000 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
PHF20-202ENST00000374000 GGT6Q6P531 493 aa18.74■□□□□ 0.59
PHF20-202ENST00000374000 KIAA1107Q9UPP5 1409 aa18.73■□□□□ 0.59
PHF20-202ENST00000374000 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
PHF20-202ENST00000374000 CFDP1Q9UEE9 299 aaPredicted RBP18.7■□□□□ 0.58
PHF20-202ENST00000374000 PLEKHH2Q8IVE3 1493 aa18.69■□□□□ 0.58
PHF20-202ENST00000374000 A2ML1A8K2U0 1454 aa18.67■□□□□ 0.58
PHF20-202ENST00000374000 CCNB3Q8WWL7 1395 aa18.67■□□□□ 0.58
PHF20-202ENST00000374000 ZNF644Q9H582 1327 aaPredicted RBP18.67■□□□□ 0.58
PHF20-202ENST00000374000 HSPA1LP34931 641 aa18.67■□□□□ 0.58
PHF20-202ENST00000374000 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
PHF20-202ENST00000374000 PIP4K2BP78356 416 aa18.64■□□□□ 0.57
PHF20-202ENST00000374000 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
PHF20-202ENST00000374000 MED1Q15648 1581 aaPredicted RBP18.64■□□□□ 0.57
PHF20-202ENST00000374000 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
PHF20-202ENST00000374000 NEURL4Q96JN8 1562 aa18.63■□□□□ 0.57
PHF20-202ENST00000374000 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
PHF20-202ENST00000374000 MBD5Q9P267 1494 aa18.62■□□□□ 0.57
PHF20-202ENST00000374000 TNRQ92752 1358 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms