RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
A1CF-204ENST00000373997 TTC37Q6PGP7 1564 aa19.43■□□□□ 0.7
A1CF-204ENST00000373997 CDC42BPBQ9Y5S2 1711 aa19.42■□□□□ 0.7
A1CF-204ENST00000373997 ZNF644Q9H582 1327 aaPredicted RBP19.42■□□□□ 0.7
A1CF-204ENST00000373997 PREX2Q70Z35 1606 aa19.42■□□□□ 0.7
A1CF-204ENST00000373997 CFDP1Q9UEE9 299 aaPredicted RBP19.42■□□□□ 0.7
A1CF-204ENST00000373997 MYO5CQ9NQX4 1742 aa19.4■□□□□ 0.7
A1CF-204ENST00000373997 CROCC2H7BZ55 1655 aa19.4■□□□□ 0.7
A1CF-204ENST00000373997 DAPK1P53355 1430 aa19.39■□□□□ 0.69
A1CF-204ENST00000373997 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.69
A1CF-204ENST00000373997 ZNF777Q9ULD5 760 aaPredicted RBP19.39■□□□□ 0.69
A1CF-204ENST00000373997 HFM1A2PYH4 1435 aa19.39■□□□□ 0.69
A1CF-204ENST00000373997 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.38■□□□□ 0.69
A1CF-204ENST00000373997 ADGBQ8N7X0 1667 aa19.37■□□□□ 0.69
A1CF-204ENST00000373997 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
A1CF-204ENST00000373997 CLSPNQ9HAW4 1339 aa19.36■□□□□ 0.69
A1CF-204ENST00000373997 NAIPQ13075 1403 aa19.36■□□□□ 0.69
A1CF-204ENST00000373997 ABCC5O15440 1437 aa19.35■□□□□ 0.69
A1CF-204ENST00000373997 KCNH8Q96L42 1107 aa19.33■□□□□ 0.69
A1CF-204ENST00000373997 RRP7BPQ9NSQ0 103 aa19.33■□□□□ 0.69
A1CF-204ENST00000373997 SAMD9LQ8IVG5 1584 aa19.32■□□□□ 0.68
A1CF-204ENST00000373997 KDM6BO15054 1643 aa19.32■□□□□ 0.68
A1CF-204ENST00000373997 AKNAQ7Z591 1439 aa19.31■□□□□ 0.68
A1CF-204ENST00000373997 ARHGAP5Q13017 1502 aa19.31■□□□□ 0.68
A1CF-204ENST00000373997 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
A1CF-204ENST00000373997 WDR7Q9Y4E6 1490 aa19.28■□□□□ 0.68
A1CF-204ENST00000373997 RIMBP3CA6NJZ7 1639 aa19.25■□□□□ 0.67
A1CF-204ENST00000373997 RIMBP3BA6NNM3 1639 aa19.25■□□□□ 0.67
A1CF-204ENST00000373997 RIMBP3Q9UFD9 1639 aa19.25■□□□□ 0.67
A1CF-204ENST00000373997 ROCK1Q13464 1354 aa19.25■□□□□ 0.67
A1CF-204ENST00000373997 ARHGEF5Q12774 1597 aa19.25■□□□□ 0.67
A1CF-204ENST00000373997 SYCP2Q9BX26 1530 aa19.24■□□□□ 0.67
A1CF-204ENST00000373997 ASXL2Q76L83 1435 aa19.23■□□□□ 0.67
A1CF-204ENST00000373997 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
A1CF-204ENST00000373997 ADGRL2O95490 1459 aa19.21■□□□□ 0.67
A1CF-204ENST00000373997 SHANK2Q9UPX8 1470 aa19.21■□□□□ 0.67
A1CF-204ENST00000373997 ABCA9Q8IUA7 1624 aa19.21■□□□□ 0.67
A1CF-204ENST00000373997 MIER1Q8N108 512 aa19.21■□□□□ 0.67
A1CF-204ENST00000373997 HNRNPMP52272 730 aaKnown RBP eCLIP19.2■□□□□ 0.66
A1CF-204ENST00000373997 C9orf84Q5VXU9 1444 aa19.19■□□□□ 0.66
A1CF-204ENST00000373997 CCDC141Q6ZP82 1450 aa19.19■□□□□ 0.66
A1CF-204ENST00000373997 MBD5Q9P267 1494 aa19.19■□□□□ 0.66
A1CF-204ENST00000373997 PLCH2O75038 1416 aa19.19■□□□□ 0.66
A1CF-204ENST00000373997 NPM1P06748 294 aaKnown RBP eCLIP19.18■□□□□ 0.66
A1CF-204ENST00000373997 NCOA1Q15788 1441 aa19.17■□□□□ 0.66
A1CF-204ENST00000373997 ANKRD30AQ9BXX3 1397 aa19.16■□□□□ 0.66
A1CF-204ENST00000373997 PLEKHH2Q8IVE3 1493 aa19.15■□□□□ 0.66
A1CF-204ENST00000373997 ABCC1P33527 1531 aa19.15■□□□□ 0.66
A1CF-204ENST00000373997 TRIM52Q96A61 297 aa19.15■□□□□ 0.66
A1CF-204ENST00000373997 ARAP3Q8WWN8 1544 aa19.14■□□□□ 0.65
A1CF-204ENST00000373997 TSPY4P0CV99 314 aa19.13■□□□□ 0.65
A1CF-204ENST00000373997 TSPY10P0CW01 314 aa19.13■□□□□ 0.65
A1CF-204ENST00000373997 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
A1CF-204ENST00000373997 MAST1Q9Y2H9 1570 aa19.11■□□□□ 0.65
A1CF-204ENST00000373997 EFCAB2Q5VUJ9 269 aa19.11■□□□□ 0.65
A1CF-204ENST00000373997 YTHDC1Q96MU7 727 aaKnown RBP19.11■□□□□ 0.65
A1CF-204ENST00000373997 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
A1CF-204ENST00000373997 KIAA1107Q9UPP5 1409 aa19.1■□□□□ 0.65
A1CF-204ENST00000373997 SIN3AQ96ST3 1273 aa19.09■□□□□ 0.65
A1CF-204ENST00000373997 FANCAO15360 1455 aa19.08■□□□□ 0.64
A1CF-204ENST00000373997 ANKRD50Q9ULJ7 1429 aa19.07■□□□□ 0.64
A1CF-204ENST00000373997 KIF15Q9NS87 1388 aa19.07■□□□□ 0.64
A1CF-204ENST00000373997 DENND4BO75064 1496 aaPredicted RBP19.07■□□□□ 0.64
A1CF-204ENST00000373997 RSPH4AQ5TD94 716 aa19.07■□□□□ 0.64
A1CF-204ENST00000373997 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
A1CF-204ENST00000373997 TRAPPC8Q9Y2L5 1435 aa19.04■□□□□ 0.64
A1CF-204ENST00000373997 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.64
A1CF-204ENST00000373997 MPHOSPH9Q99550 1183 aa19.02■□□□□ 0.64
A1CF-204ENST00000373997 ADGRL1O94910 1474 aa19.01■□□□□ 0.63
A1CF-204ENST00000373997 PZPP20742 1482 aa19.01■□□□□ 0.63
A1CF-204ENST00000373997 CD109Q6YHK3 1445 aa18.99■□□□□ 0.63
A1CF-204ENST00000373997 ZFYVE16Q7Z3T8 1539 aa18.98■□□□□ 0.63
A1CF-204ENST00000373997 FOXD1Q16676 465 aa18.98■□□□□ 0.63
A1CF-204ENST00000373997 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
A1CF-204ENST00000373997 INO80Q9ULG1 1556 aaPredicted RBP18.96■□□□□ 0.63
A1CF-204ENST00000373997 MAP3K4Q9Y6R4 1608 aa18.96■□□□□ 0.63
A1CF-204ENST00000373997 DUOX2Q9NRD8 1548 aa18.96■□□□□ 0.63
A1CF-204ENST00000373997 SCAPERQ9BY12 1400 aa18.96■□□□□ 0.63
A1CF-204ENST00000373997 AFAP1Q8N556 730 aa18.95■□□□□ 0.62
A1CF-204ENST00000373997 KDM5DQ9BY66 1539 aa18.95■□□□□ 0.62
A1CF-204ENST00000373997 UNC13BO14795 1591 aa18.94■□□□□ 0.62
A1CF-204ENST00000373997 SPAG9O60271 1321 aaKnown RBP18.94■□□□□ 0.62
A1CF-204ENST00000373997 ATP7AQ04656 1500 aa18.94■□□□□ 0.62
A1CF-204ENST00000373997 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
A1CF-204ENST00000373997 NUP155O75694 1391 aa18.93■□□□□ 0.62
A1CF-204ENST00000373997 TSPOAP1O95153 1857 aa18.92■□□□□ 0.62
A1CF-204ENST00000373997 DIP2BQ9P265 1576 aa18.91■□□□□ 0.62
A1CF-204ENST00000373997 GLI2P10070 1586 aa18.9■□□□□ 0.62
A1CF-204ENST00000373997 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
A1CF-204ENST00000373997 KIDINS220Q9ULH0 1771 aa18.89■□□□□ 0.62
A1CF-204ENST00000373997 ERBINQ96RT1 1412 aa18.89■□□□□ 0.61
A1CF-204ENST00000373997 ANKRD30BQ9BXX2 1392 aa18.89■□□□□ 0.61
A1CF-204ENST00000373997 MYT1Q01538 1121 aa18.89■□□□□ 0.61
A1CF-204ENST00000373997 TIMELESSQ9UNS1 1208 aa18.88■□□□□ 0.61
A1CF-204ENST00000373997 FAM135AQ9P2D6 1515 aa18.88■□□□□ 0.61
A1CF-204ENST00000373997 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
A1CF-204ENST00000373997 ZNF518AQ6AHZ1 1483 aa18.87■□□□□ 0.61
A1CF-204ENST00000373997 IQGAP3Q86VI3 1631 aa18.87■□□□□ 0.61
A1CF-204ENST00000373997 PKD2Q13563 968 aa18.86■□□□□ 0.61
A1CF-204ENST00000373997 POGZQ7Z3K3 1410 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms