RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 DAPK1P53355 1430 aa29.04■■■□□ 2.24
SRSF4-201ENST00000373795 ERCC6L2Q5T890 1561 aa29.03■■■□□ 2.24
SRSF4-201ENST00000373795 ABCC5O15440 1437 aa29.03■■■□□ 2.24
SRSF4-201ENST00000373795 ADCY10Q96PN6 1610 aa29.02■■■□□ 2.24
SRSF4-201ENST00000373795 KDM6BO15054 1643 aa29.01■■■□□ 2.24
SRSF4-201ENST00000373795 GCC2Q8IWJ2 1684 aa28.99■■■□□ 2.23
SRSF4-201ENST00000373795 DNMT1P26358 1616 aaKnown RBP28.98■■■□□ 2.23
SRSF4-201ENST00000373795 TRIM52Q96A61 297 aa28.97■■■□□ 2.23
SRSF4-201ENST00000373795 AKNAQ7Z591 1439 aa28.96■■■□□ 2.23
SRSF4-201ENST00000373795 CAMSAP2Q08AD1 1489 aa28.96■■■□□ 2.23
SRSF4-201ENST00000373795 ITSN2Q9NZM3 1697 aa28.95■■■□□ 2.23
SRSF4-201ENST00000373795 ABCC10Q5T3U5 1492 aa28.91■■■□□ 2.22
SRSF4-201ENST00000373795 ROCK1Q13464 1354 aa28.9■■■□□ 2.22
SRSF4-201ENST00000373795 TIMELESSQ9UNS1 1208 aa28.89■■■□□ 2.22
SRSF4-201ENST00000373795 CDC42BPAQ5VT25 1732 aa28.89■■■□□ 2.22
SRSF4-201ENST00000373795 CLASP1Q7Z460 1538 aa28.88■■■□□ 2.21
SRSF4-201ENST00000373795 DENND4BO75064 1496 aaPredicted RBP28.85■■■□□ 2.21
SRSF4-201ENST00000373795 PPP1R15AO75807 674 aaPredicted RBP28.85■■■□□ 2.21
SRSF4-201ENST00000373795 MPHOSPH9Q99550 1183 aa28.84■■■□□ 2.21
SRSF4-201ENST00000373795 TONSLQ96HA7 1378 aa28.8■■■□□ 2.2
SRSF4-201ENST00000373795 FOXD1Q16676 465 aa28.8■■■□□ 2.2
SRSF4-201ENST00000373795 NCOA1Q15788 1441 aa28.79■■■□□ 2.2
SRSF4-201ENST00000373795 ABCC2Q92887 1545 aa28.78■■■□□ 2.2
SRSF4-201ENST00000373795 HNRNPMP52272 730 aaKnown RBP eCLIP28.75■■■□□ 2.193e-9■■■■□ 23.4
SRSF4-201ENST00000373795 CROCC2H7BZ55 1655 aa28.73■■■□□ 2.19
SRSF4-201ENST00000373795 KCNH8Q96L42 1107 aa28.73■■■□□ 2.19
SRSF4-201ENST00000373795 ADGBQ8N7X0 1667 aa28.71■■■□□ 2.19
SRSF4-201ENST00000373795 CDC42BPBQ9Y5S2 1711 aa28.69■■■□□ 2.18
SRSF4-201ENST00000373795 ANKRD30AQ9BXX3 1397 aa28.68■■■□□ 2.18
SRSF4-201ENST00000373795 ADGRL2O95490 1459 aa28.68■■■□□ 2.18
SRSF4-201ENST00000373795 HIRIP3Q9BW71 556 aaPredicted RBP28.67■■■□□ 2.18
SRSF4-201ENST00000373795 SLC4A1APQ9BWU0 796 aaKnown RBP28.67■■■□□ 2.18
SRSF4-201ENST00000373795 TSPY4P0CV99 314 aa28.66■■■□□ 2.18
SRSF4-201ENST00000373795 TSPY10P0CW01 314 aa28.66■■■□□ 2.18
SRSF4-201ENST00000373795 TTC37Q6PGP7 1564 aa28.65■■■□□ 2.18
SRSF4-201ENST00000373795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.65■■■□□ 2.189e-8■■□□□ 12.5
SRSF4-201ENST00000373795 C9orf84Q5VXU9 1444 aa28.64■■■□□ 2.17
SRSF4-201ENST00000373795 PREX2Q70Z35 1606 aa28.63■■■□□ 2.17
SRSF4-201ENST00000373795 SAMD9LQ8IVG5 1584 aa28.63■■■□□ 2.17
SRSF4-201ENST00000373795 MBD5Q9P267 1494 aa28.62■■■□□ 2.17
SRSF4-201ENST00000373795 ZCCHC11Q5TAX3 1644 aaKnown RBP28.62■■■□□ 2.17
SRSF4-201ENST00000373795 KDM5BQ9UGL1 1544 aa28.61■■■□□ 2.17
SRSF4-201ENST00000373795 UHRF1BP1LA0JNW5 1464 aa28.59■■■□□ 2.17
SRSF4-201ENST00000373795 ANKRD50Q9ULJ7 1429 aa28.59■■■□□ 2.17
SRSF4-201ENST00000373795 ANKRD30BQ9BXX2 1392 aa28.59■■■□□ 2.17
SRSF4-201ENST00000373795 SHANK2Q9UPX8 1470 aa28.58■■■□□ 2.17
SRSF4-201ENST00000373795 PZPP20742 1482 aa28.58■■■□□ 2.17
SRSF4-201ENST00000373795 ARHGAP5Q13017 1502 aa28.57■■■□□ 2.16
SRSF4-201ENST00000373795 ARHGEF5Q12774 1597 aa28.55■■■□□ 2.16
SRSF4-201ENST00000373795 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
SRSF4-201ENST00000373795 CCDC141Q6ZP82 1450 aa28.51■■■□□ 2.15
SRSF4-201ENST00000373795 MYO5CQ9NQX4 1742 aa28.51■■■□□ 2.15
SRSF4-201ENST00000373795 SYCP2Q9BX26 1530 aa28.51■■■□□ 2.15
SRSF4-201ENST00000373795 KIF15Q9NS87 1388 aa28.5■■■□□ 2.15
SRSF4-201ENST00000373795 RSPH4AQ5TD94 716 aa28.49■■■□□ 2.15
SRSF4-201ENST00000373795 DDX10Q13206 875 aaKnown RBP28.48■■■□□ 2.15
SRSF4-201ENST00000373795 OSCARQ8IYS5 282 aa28.48■■■□□ 2.15
SRSF4-201ENST00000373795 PKD2Q13563 968 aa28.48■■■□□ 2.15
SRSF4-201ENST00000373795 RPRD2Q5VT52 1461 aaKnown RBP28.46■■■□□ 2.15
SRSF4-201ENST00000373795 NUP155O75694 1391 aa28.46■■■□□ 2.15
SRSF4-201ENST00000373795 PLCH2O75038 1416 aa28.44■■■□□ 2.14
SRSF4-201ENST00000373795 KIAA1107Q9UPP5 1409 aa28.41■■■□□ 2.14
SRSF4-201ENST00000373795 ARHGEF12Q9NZN5 1544 aa28.41■■■□□ 2.14
SRSF4-201ENST00000373795 EFCAB2Q5VUJ9 269 aa28.4■■■□□ 2.14
SRSF4-201ENST00000373795 NBPF8Q3BBV2 869 aa28.35■■■□□ 2.13
SRSF4-201ENST00000373795 TEX14Q8IWB6 1497 aa28.35■■■□□ 2.13
SRSF4-201ENST00000373795 PLEKHH2Q8IVE3 1493 aa28.34■■■□□ 2.13
SRSF4-201ENST00000373795 WDR7Q9Y4E6 1490 aa28.32■■■□□ 2.12
SRSF4-201ENST00000373795 MAST1Q9Y2H9 1570 aa28.31■■■□□ 2.12
SRSF4-201ENST00000373795 HSPA5P11021 654 aaKnown RBP28.3■■■□□ 2.12
SRSF4-201ENST00000373795 KDM5DQ9BY66 1539 aa28.29■■■□□ 2.12
SRSF4-201ENST00000373795 TRAPPC8Q9Y2L5 1435 aa28.28■■■□□ 2.12
SRSF4-201ENST00000373795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.27■■■□□ 2.123e-7■■□□□ 13.3
SRSF4-201ENST00000373795 SUPT16HQ9Y5B9 1047 aaKnown RBP28.26■■■□□ 2.11
SRSF4-201ENST00000373795 AFAP1Q8N556 730 aa28.25■■■□□ 2.11
SRSF4-201ENST00000373795 ABCC1P33527 1531 aa28.25■■■□□ 2.11
SRSF4-201ENST00000373795 EIF4G2P78344 907 aaKnown RBP eCLIP28.24■■■□□ 2.11
SRSF4-201ENST00000373795 ASXL2Q76L83 1435 aa28.24■■■□□ 2.11
SRSF4-201ENST00000373795 FAM135AQ9P2D6 1515 aa28.22■■■□□ 2.11
SRSF4-201ENST00000373795 PLXNC1O60486 1568 aa28.21■■■□□ 2.11
SRSF4-201ENST00000373795 NPM1P06748 294 aaKnown RBP eCLIP28.18■■■□□ 2.1
SRSF4-201ENST00000373795 ZNF326Q5BKZ1 582 aaKnown RBP28.18■■■□□ 2.1
SRSF4-201ENST00000373795 ARAP3Q8WWN8 1544 aa28.16■■■□□ 2.1
SRSF4-201ENST00000373795 SPAG9O60271 1321 aaKnown RBP28.16■■■□□ 2.1
SRSF4-201ENST00000373795 ABCA9Q8IUA7 1624 aa28.16■■■□□ 2.1
SRSF4-201ENST00000373795 DUOX2Q9NRD8 1548 aa28.16■■■□□ 2.1
SRSF4-201ENST00000373795 FANCAO15360 1455 aa28.15■■■□□ 2.1
SRSF4-201ENST00000373795 WASHC2AQ641Q2 1341 aa28.15■■■□□ 2.1
SRSF4-201ENST00000373795 UNC13BO14795 1591 aa28.13■■■□□ 2.09
SRSF4-201ENST00000373795 C11orf95C9JLR9 678 aaPredicted RBP28.11■■■□□ 2.09
SRSF4-201ENST00000373795 ERBINQ96RT1 1412 aa28.09■■■□□ 2.09
SRSF4-201ENST00000373795 KDM2AQ9Y2K7 1162 aa28.09■■■□□ 2.09
SRSF4-201ENST00000373795 ANP32CO43423 234 aa28.07■■■□□ 2.08
SRSF4-201ENST00000373795 SCAPERQ9BY12 1400 aa28.06■■■□□ 2.08
SRSF4-201ENST00000373795 ADGRL1O94910 1474 aa28.05■■■□□ 2.08
SRSF4-201ENST00000373795 RTEL1-TNFRSF6BF6WH68 1400 aa28.05■■■□□ 2.08
SRSF4-201ENST00000373795 SPATA31E1Q6ZUB1 1445 aa28.05■■■□□ 2.08
SRSF4-201ENST00000373795 DCAF11Q8TEB1 546 aa28.04■■■□□ 2.08
SRSF4-201ENST00000373795 MYT1LQ9UL68 1186 aa28.04■■■□□ 2.08
SRSF4-201ENST00000373795 ZFYVE16Q7Z3T8 1539 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms