RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 DEF6Q9H4E7 631 aa8.8□□□□□ -1
CSMD2-206ENST00000373388 TPM3P06753 285 aa8.8□□□□□ -1
CSMD2-206ENST00000373388 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
CSMD2-206ENST00000373388 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
CSMD2-206ENST00000373388 CDR1P51861 262 aa8.8□□□□□ -1
CSMD2-206ENST00000373388 DIAPH3Q9NSV4 1193 aa8.79□□□□□ -1
CSMD2-206ENST00000373388 TIMELESSQ9UNS1 1208 aa8.79□□□□□ -1
CSMD2-206ENST00000373388 HSP90B2PQ58FF3 399 aa8.79□□□□□ -1
CSMD2-206ENST00000373388 INCENPQ9NQS7 918 aa8.79□□□□□ -1
CSMD2-206ENST00000373388 ISY1Q9ULR0 285 aaKnown RBP8.78□□□□□ -1
CSMD2-206ENST00000373388 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
CSMD2-206ENST00000373388 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
CSMD2-206ENST00000373388 PES1O00541 588 aaKnown RBP8.78□□□□□ -1
CSMD2-206ENST00000373388 CDCA8Q53HL2 280 aa8.77□□□□□ -1.01
CSMD2-206ENST00000373388 B4GALNT3Q6L9W6 998 aa8.77□□□□□ -1.01
CSMD2-206ENST00000373388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.77□□□□□ -1.01
CSMD2-206ENST00000373388 FGD1P98174 961 aa8.77□□□□□ -1.01
CSMD2-206ENST00000373388 AK7Q96M32 723 aa8.77□□□□□ -1.01
CSMD2-206ENST00000373388 H0YHG0 523 aa8.77□□□□□ -1.01
CSMD2-206ENST00000373388 TAF7LQ5H9L4 462 aa8.76□□□□□ -1.01
CSMD2-206ENST00000373388 ATP6V1DQ9Y5K8 247 aa8.76□□□□□ -1.01
CSMD2-206ENST00000373388 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
CSMD2-206ENST00000373388 SCRIBQ14160 1630 aa8.75□□□□□ -1.01
CSMD2-206ENST00000373388 SLKQ9H2G2 1235 aaPredicted RBP8.75□□□□□ -1.01
CSMD2-206ENST00000373388 LEKR1Q6ZMV7 388 aa8.74□□□□□ -1.01
CSMD2-206ENST00000373388 CFAP53Q96M91 514 aa8.74□□□□□ -1.01
CSMD2-206ENST00000373388 PLEKHG5O94827 1062 aa8.74□□□□□ -1.01
CSMD2-206ENST00000373388 DYDC1Q8WWB3 177 aa8.74□□□□□ -1.01
CSMD2-206ENST00000373388 MYO15BQ96JP2 1530 aa8.73□□□□□ -1.01
CSMD2-206ENST00000373388 CAGE1Q8TC20 777 aa8.73□□□□□ -1.01
CSMD2-206ENST00000373388 STAG3Q9UJ98 1225 aa8.73□□□□□ -1.01
CSMD2-206ENST00000373388 CAVIN1Q6NZI2 390 aaKnown RBP8.73□□□□□ -1.01
CSMD2-206ENST00000373388 HAP1P54257 671 aaPredicted RBP8.72□□□□□ -1.01
CSMD2-206ENST00000373388 CC2D1BQ5T0F9 858 aaKnown RBP8.72□□□□□ -1.01
CSMD2-206ENST00000373388 GOLGA6L7A0A1B0GV03 622 aa8.72□□□□□ -1.01
CSMD2-206ENST00000373388 ERCC4Q92889 916 aaPredicted RBP8.72□□□□□ -1.01
CSMD2-206ENST00000373388 CCDC39Q9UFE4 941 aa8.72□□□□□ -1.01
CSMD2-206ENST00000373388 KCNJ4P48050 445 aa8.71□□□□□ -1.01
CSMD2-206ENST00000373388 DHX8Q14562 1220 aaKnown RBP8.71□□□□□ -1.01
CSMD2-206ENST00000373388 MRE11P49959 708 aa8.71□□□□□ -1.01
CSMD2-206ENST00000373388 SSR1P43307 286 aaKnown RBP8.71□□□□□ -1.02
CSMD2-206ENST00000373388 MAPK8IP3Q9UPT6 1336 aa8.7□□□□□ -1.02
CSMD2-206ENST00000373388 ANO8Q9HCE9 1232 aaPredicted RBP8.7□□□□□ -1.02
CSMD2-206ENST00000373388 KIF3AQ9Y496 699 aa8.7□□□□□ -1.02
CSMD2-206ENST00000373388 TPM1P09493 284 aa8.7□□□□□ -1.02
CSMD2-206ENST00000373388 ST18O60284 1047 aa8.7□□□□□ -1.02
CSMD2-206ENST00000373388 ZRSR2Q15696 482 aaKnown RBP8.7□□□□□ -1.02
CSMD2-206ENST00000373388 RUFY1Q96T51 708 aa8.7□□□□□ -1.02
CSMD2-206ENST00000373388 HOMEZQ8IX15 550 aa8.7□□□□□ -1.02
CSMD2-206ENST00000373388 PDCL2Q8N4E4 241 aa8.69□□□□□ -1.02
CSMD2-206ENST00000373388 MEX3CQ5U5Q3 659 aaKnown RBP8.69□□□□□ -1.02
CSMD2-206ENST00000373388 CCP110O43303 1012 aa8.69□□□□□ -1.02
CSMD2-206ENST00000373388 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
CSMD2-206ENST00000373388 NEXNQ0ZGT2 675 aa8.69□□□□□ -1.02
CSMD2-206ENST00000373388 GNL2Q13823 731 aaKnown RBP8.69□□□□□ -1.02
CSMD2-206ENST00000373388 FAM107BQ9H098 131 aa8.69□□□□□ -1.02
CSMD2-206ENST00000373388 AXDND1Q5T1B0 1012 aaPredicted RBP8.68□□□□□ -1.02
CSMD2-206ENST00000373388 CHMP4CQ96CF2 233 aa8.68□□□□□ -1.02
CSMD2-206ENST00000373388 KNSTRNQ9Y448 316 aa8.68□□□□□ -1.02
CSMD2-206ENST00000373388 PHLDB1Q86UU1 1377 aa8.68□□□□□ -1.02
CSMD2-206ENST00000373388 CALCOCO1Q9P1Z2 691 aa8.68□□□□□ -1.02
CSMD2-206ENST00000373388 KIAA0754O94854 1291 aa8.67□□□□□ -1.02
CSMD2-206ENST00000373388 TSR1Q2NL82 804 aaKnown RBP8.67□□□□□ -1.02
CSMD2-206ENST00000373388 A0A0G2JS52 829 aa8.67□□□□□ -1.02
CSMD2-206ENST00000373388 GOLGA6L19H0YKK7 550 aa8.67□□□□□ -1.02
CSMD2-206ENST00000373388 IPO7O95373 1038 aaKnown RBP8.67□□□□□ -1.02
CSMD2-206ENST00000373388 RWDD1Q9H446 243 aaPredicted RBP8.67□□□□□ -1.02
CSMD2-206ENST00000373388 IRX3P78415 501 aaPredicted RBP8.66□□□□□ -1.02
CSMD2-206ENST00000373388 RRP7BPQ9NSQ0 103 aa8.66□□□□□ -1.02
CSMD2-206ENST00000373388 GIMAP7Q8NHV1 300 aa8.66□□□□□ -1.02
CSMD2-206ENST00000373388 ZBTB7CA1YPR0 619 aa8.66□□□□□ -1.02
CSMD2-206ENST00000373388 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
CSMD2-206ENST00000373388 HSP90AB3PQ58FF7 597 aa8.65□□□□□ -1.02
CSMD2-206ENST00000373388 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
CSMD2-206ENST00000373388 TAOK2Q9UL54 1235 aa8.65□□□□□ -1.02
CSMD2-206ENST00000373388 DDX11Q96FC9 970 aa8.65□□□□□ -1.03
CSMD2-206ENST00000373388 MNS1Q8NEH6 495 aa8.65□□□□□ -1.03
CSMD2-206ENST00000373388 NASPP49321 788 aaPredicted RBP8.64□□□□□ -1.03
CSMD2-206ENST00000373388 CTR9Q6PD62 1173 aa8.64□□□□□ -1.03
CSMD2-206ENST00000373388 PDCL3Q9H2J4 239 aa8.64□□□□□ -1.03
CSMD2-206ENST00000373388 IPO8O15397 1037 aaKnown RBP8.64□□□□□ -1.03
CSMD2-206ENST00000373388 DNAJC2Q99543 621 aaKnown RBP8.64□□□□□ -1.03
CSMD2-206ENST00000373388 DDX49Q9Y6V7 483 aaKnown RBP8.64□□□□□ -1.03
CSMD2-206ENST00000373388 PMFBP1Q8TBY8 1022 aa8.64□□□□□ -1.03
CSMD2-206ENST00000373388 CCDC173Q0VFZ6 552 aa8.64□□□□□ -1.03
CSMD2-206ENST00000373388 MYO6Q9UM54 1294 aa8.64□□□□□ -1.03
CSMD2-206ENST00000373388 CCAR2Q8N163 923 aaKnown RBP8.63□□□□□ -1.03
CSMD2-206ENST00000373388 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
CSMD2-206ENST00000373388 TULP1O00294 542 aaPredicted RBP8.63□□□□□ -1.03
CSMD2-206ENST00000373388 PDE3BQ13370 1112 aa8.63□□□□□ -1.03
CSMD2-206ENST00000373388 BECN2A8MW95 431 aa8.62□□□□□ -1.03
CSMD2-206ENST00000373388 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
CSMD2-206ENST00000373388 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
CSMD2-206ENST00000373388 EIF3JO75822 258 aaKnown RBP8.62□□□□□ -1.03
CSMD2-206ENST00000373388 GOLGA6L10A6NI86 522 aa8.62□□□□□ -1.03
CSMD2-206ENST00000373388 SETSIPP0DME0 302 aa8.62□□□□□ -1.03
CSMD2-206ENST00000373388 C14orf37Q86TY3 774 aa8.62□□□□□ -1.03
CSMD2-206ENST00000373388 RCAN3Q9UKA8 241 aa8.61□□□□□ -1.03
CSMD2-206ENST00000373388 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
CSMD2-206ENST00000373388 CLIP1P30622 1438 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms