RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 KIAA1211Q6ZU35 1233 aa19.75■□□□□ 0.75
CHST3-201ENST00000373115 DCAF11Q8TEB1 546 aa19.75■□□□□ 0.75
CHST3-201ENST00000373115 SRPK2P78362 688 aaKnown RBP19.73■□□□□ 0.75
CHST3-201ENST00000373115 MORC1Q86VD1 984 aa19.73■□□□□ 0.75
CHST3-201ENST00000373115 HSP90B1P14625 803 aaKnown RBP19.71■□□□□ 0.75
CHST3-201ENST00000373115 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
CHST3-201ENST00000373115 ITPRIPQ8IWB1 547 aa19.7■□□□□ 0.74
CHST3-201ENST00000373115 RTF1Q92541 710 aaKnown RBP19.7■□□□□ 0.74
CHST3-201ENST00000373115 MFAP1P55081 439 aaKnown RBP19.69■□□□□ 0.74
CHST3-201ENST00000373115 PRM3Q9NNZ6 103 aa19.67■□□□□ 0.74
CHST3-201ENST00000373115 A0A0U1RQG5 324 aaPredicted RBP19.67■□□□□ 0.74
CHST3-201ENST00000373115 CREBRFQ8IUR6 639 aa19.67■□□□□ 0.74
CHST3-201ENST00000373115 GOLGA6L3A6NEY3 463 aa19.66■□□□□ 0.74
CHST3-201ENST00000373115 PTMSP20962 102 aa19.66■□□□□ 0.74
CHST3-201ENST00000373115 NOL8Q76FK4 1167 aaKnown RBP19.66■□□□□ 0.74
CHST3-201ENST00000373115 ZNF330Q9Y3S2 320 aaPredicted RBP19.65■□□□□ 0.74
CHST3-201ENST00000373115 CFAP44Q96MT7 982 aa19.65■□□□□ 0.74
CHST3-201ENST00000373115 ANO8Q9HCE9 1232 aaPredicted RBP19.64■□□□□ 0.73
CHST3-201ENST00000373115 SYAP1Q96A49 352 aaPredicted RBP19.63■□□□□ 0.73
CHST3-201ENST00000373115 TPM4P67936 248 aa19.62■□□□□ 0.73
CHST3-201ENST00000373115 RCAN3Q9UKA8 241 aa19.62■□□□□ 0.73
CHST3-201ENST00000373115 GOLGA6L1Q8N7Z2 621 aa19.62■□□□□ 0.73
CHST3-201ENST00000373115 STK26Q9P289 416 aa19.62■□□□□ 0.73
CHST3-201ENST00000373115 FOXD4L5Q5VV16 416 aaPredicted RBP19.61■□□□□ 0.73
CHST3-201ENST00000373115 FOXD4L4Q8WXT5 416 aaPredicted RBP19.61■□□□□ 0.73
CHST3-201ENST00000373115 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
CHST3-201ENST00000373115 TRIM6-TRIM34B2RNG4 842 aa19.6■□□□□ 0.73
CHST3-201ENST00000373115 IPO8O15397 1037 aaKnown RBP19.6■□□□□ 0.73
CHST3-201ENST00000373115 RWDD1Q9H446 243 aaPredicted RBP19.59■□□□□ 0.73
CHST3-201ENST00000373115 MLECQ14165 292 aa19.58■□□□□ 0.73
CHST3-201ENST00000373115 HTATSF1O43719 755 aaKnown RBP19.58■□□□□ 0.73
CHST3-201ENST00000373115 CHMP3Q9Y3E7 222 aa19.57■□□□□ 0.72
CHST3-201ENST00000373115 KTN1Q86UP2 1357 aaKnown RBP19.56■□□□□ 0.72
CHST3-201ENST00000373115 CCER2I3L3R5 266 aa19.56■□□□□ 0.72
CHST3-201ENST00000373115 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
CHST3-201ENST00000373115 FOXD1Q16676 465 aa19.55■□□□□ 0.72
CHST3-201ENST00000373115 PAK3O75914 559 aaPredicted RBP19.55■□□□□ 0.72
CHST3-201ENST00000373115 TCERG1O14776 1098 aaKnown RBP19.54■□□□□ 0.72
CHST3-201ENST00000373115 U2AF1L5P0DN76 240 aaPredicted RBP19.54■□□□□ 0.72
CHST3-201ENST00000373115 U2AF1Q01081 240 aaKnown RBP eCLIP19.54■□□□□ 0.72
CHST3-201ENST00000373115 IPO9Q96P70 1041 aaKnown RBP19.53■□□□□ 0.72
CHST3-201ENST00000373115 RASSF8Q8NHQ8 419 aa19.52■□□□□ 0.72
CHST3-201ENST00000373115 GORABQ5T7V8 394 aa19.52■□□□□ 0.72
CHST3-201ENST00000373115 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
CHST3-201ENST00000373115 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
CHST3-201ENST00000373115 KANK1Q14678 1352 aa19.49■□□□□ 0.71
CHST3-201ENST00000373115 CCNB3Q8WWL7 1395 aa19.49■□□□□ 0.71
CHST3-201ENST00000373115 CCDC146Q8IYE0 955 aa19.49■□□□□ 0.71
CHST3-201ENST00000373115 SMC4Q9NTJ3 1288 aa19.48■□□□□ 0.71
CHST3-201ENST00000373115 HDGFL2Q7Z4V5 671 aaPredicted RBP19.48■□□□□ 0.71
CHST3-201ENST00000373115 CLUAP1Q96AJ1 413 aa19.48■□□□□ 0.71
CHST3-201ENST00000373115 HSP90AA2PQ14568 343 aaPredicted RBP19.48■□□□□ 0.71
CHST3-201ENST00000373115 SLC4A10Q6U841 1118 aa19.48■□□□□ 0.71
CHST3-201ENST00000373115 GPATCH3Q96I76 525 aa19.47■□□□□ 0.71
CHST3-201ENST00000373115 CSPP1Q1MSJ5 1256 aa19.46■□□□□ 0.71
CHST3-201ENST00000373115 TAF7LQ5H9L4 462 aa19.46■□□□□ 0.71
CHST3-201ENST00000373115 FOXD4L6Q3SYB3 417 aaPredicted RBP19.46■□□□□ 0.71
CHST3-201ENST00000373115 FOXD4L3Q6VB84 417 aaPredicted RBP19.46■□□□□ 0.71
CHST3-201ENST00000373115 CSB-PGBD3P0DP91 1061 aa19.45■□□□□ 0.7
CHST3-201ENST00000373115 EEA1Q15075 1411 aa19.45■□□□□ 0.7
CHST3-201ENST00000373115 PES1O00541 588 aaKnown RBP19.45■□□□□ 0.7
CHST3-201ENST00000373115 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
CHST3-201ENST00000373115 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
CHST3-201ENST00000373115 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
CHST3-201ENST00000373115 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
CHST3-201ENST00000373115 PATL2C9JE40 543 aaKnown RBP19.43■□□□□ 0.7
CHST3-201ENST00000373115 CCAR2Q8N163 923 aaKnown RBP19.43■□□□□ 0.7
CHST3-201ENST00000373115 TPM3P06753 285 aa19.43■□□□□ 0.7
CHST3-201ENST00000373115 SLC4A3P48751 1232 aa19.42■□□□□ 0.7
CHST3-201ENST00000373115 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
CHST3-201ENST00000373115 PHF14O94880 888 aa19.41■□□□□ 0.7
CHST3-201ENST00000373115 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
CHST3-201ENST00000373115 VPS53Q5VIR6 699 aa19.41■□□□□ 0.7
CHST3-201ENST00000373115 CCDC9Q9Y3X0 531 aaKnown RBP19.41■□□□□ 0.7
CHST3-201ENST00000373115 STK31Q9BXU1 1019 aa19.41■□□□□ 0.7
CHST3-201ENST00000373115 TOMM22Q9NS69 142 aa19.41■□□□□ 0.7
CHST3-201ENST00000373115 CCDC34Q96HJ3 373 aa19.4■□□□□ 0.7
CHST3-201ENST00000373115 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
CHST3-201ENST00000373115 SF3A1Q15459 793 aaKnown RBP19.39■□□□□ 0.7
CHST3-201ENST00000373115 SETQ01105 290 aaPredicted RBP19.39■□□□□ 0.7
CHST3-201ENST00000373115 CEP89Q96ST8 783 aa19.39■□□□□ 0.7
CHST3-201ENST00000373115 KIF16BQ96L93 1317 aa19.39■□□□□ 0.69
CHST3-201ENST00000373115 PKD2Q13563 968 aa19.39■□□□□ 0.69
CHST3-201ENST00000373115 HDGFP51858 240 aaKnown RBP19.38■□□□□ 0.69
CHST3-201ENST00000373115 GGT6Q6P531 493 aa19.38■□□□□ 0.69
CHST3-201ENST00000373115 FBXO3Q9UK99 471 aa19.38■□□□□ 0.69
CHST3-201ENST00000373115 TPD52L1Q16890 204 aaPredicted RBP19.37■□□□□ 0.69
CHST3-201ENST00000373115 VSIG10Q8N0Z9 540 aa19.37■□□□□ 0.69
CHST3-201ENST00000373115 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
CHST3-201ENST00000373115 ST18O60284 1047 aa19.37■□□□□ 0.69
CHST3-201ENST00000373115 SETD5Q9C0A6 1442 aa19.37■□□□□ 0.69
CHST3-201ENST00000373115 RALBP1Q15311 655 aa19.36■□□□□ 0.69
CHST3-201ENST00000373115 WWC1Q8IX03 1113 aa19.36■□□□□ 0.69
CHST3-201ENST00000373115 MARCH6O60337 910 aa19.35■□□□□ 0.69
CHST3-201ENST00000373115 HMMRO75330 724 aa19.35■□□□□ 0.69
CHST3-201ENST00000373115 H3BQV1 296 aa19.35■□□□□ 0.69
CHST3-201ENST00000373115 IFFO2Q5TF58 517 aa19.35■□□□□ 0.69
CHST3-201ENST00000373115 ZNF592Q92610 1267 aa19.35■□□□□ 0.69
CHST3-201ENST00000373115 TMX4Q9H1E5 349 aaPredicted RBP19.35■□□□□ 0.69
CHST3-201ENST00000373115 ZNF771Q7L3S4 317 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms