RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
TSPAN6-201ENST00000373020 ADGBQ8N7X0 1667 aa17.76■□□□□ 0.43
TSPAN6-201ENST00000373020 MPHOSPH9Q99550 1183 aa17.75■□□□□ 0.43
TSPAN6-201ENST00000373020 CROCC2H7BZ55 1655 aa17.75■□□□□ 0.43
TSPAN6-201ENST00000373020 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
TSPAN6-201ENST00000373020 CAMSAP2Q08AD1 1489 aa17.74■□□□□ 0.43
TSPAN6-201ENST00000373020 PLB1Q6P1J6 1458 aa17.74■□□□□ 0.43
TSPAN6-201ENST00000373020 KIF14Q15058 1648 aa17.73■□□□□ 0.43
TSPAN6-201ENST00000373020 PRG4Q92954 1404 aaPredicted RBP17.73■□□□□ 0.43
TSPAN6-201ENST00000373020 TRIM52Q96A61 297 aa17.73■□□□□ 0.43
TSPAN6-201ENST00000373020 RPRD2Q5VT52 1461 aaKnown RBP17.73■□□□□ 0.43
TSPAN6-201ENST00000373020 ANP32CO43423 234 aa17.72■□□□□ 0.43
TSPAN6-201ENST00000373020 TEX14Q8IWB6 1497 aa17.72■□□□□ 0.43
TSPAN6-201ENST00000373020 ANKRD30BQ9BXX2 1392 aa17.72■□□□□ 0.43
TSPAN6-201ENST00000373020 ADGRL2O95490 1459 aa17.72■□□□□ 0.43
TSPAN6-201ENST00000373020 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
TSPAN6-201ENST00000373020 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
TSPAN6-201ENST00000373020 ABCA8O94911 1581 aa17.7■□□□□ 0.42
TSPAN6-201ENST00000373020 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
TSPAN6-201ENST00000373020 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
TSPAN6-201ENST00000373020 PZPP20742 1482 aa17.67■□□□□ 0.42
TSPAN6-201ENST00000373020 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
TSPAN6-201ENST00000373020 HSPA5P11021 654 aaKnown RBP17.66■□□□□ 0.42
TSPAN6-201ENST00000373020 CDC42BPAQ5VT25 1732 aa17.65■□□□□ 0.42
TSPAN6-201ENST00000373020 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.42
TSPAN6-201ENST00000373020 WASHC2AQ641Q2 1341 aa17.64■□□□□ 0.41
TSPAN6-201ENST00000373020 ABCC10Q5T3U5 1492 aa17.63■□□□□ 0.41
TSPAN6-201ENST00000373020 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
TSPAN6-201ENST00000373020 SHANK2Q9UPX8 1470 aa17.62■□□□□ 0.41
TSPAN6-201ENST00000373020 POLR1AO95602 1720 aaPredicted RBP17.62■□□□□ 0.41
TSPAN6-201ENST00000373020 EIF4G2P78344 907 aaKnown RBP eCLIP17.62■□□□□ 0.41
TSPAN6-201ENST00000373020 CFDP1Q9UEE9 299 aaPredicted RBP17.62■□□□□ 0.41
TSPAN6-201ENST00000373020 FOXD1Q16676 465 aa17.61■□□□□ 0.41
TSPAN6-201ENST00000373020 MBD5Q9P267 1494 aa17.6■□□□□ 0.41
TSPAN6-201ENST00000373020 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
TSPAN6-201ENST00000373020 ATP10BO94823 1461 aa17.58■□□□□ 0.41
TSPAN6-201ENST00000373020 SPATA31E1Q6ZUB1 1445 aa17.58■□□□□ 0.4
TSPAN6-201ENST00000373020 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
TSPAN6-201ENST00000373020 KIAA1107Q9UPP5 1409 aa17.57■□□□□ 0.4
TSPAN6-201ENST00000373020 ANKRD30AQ9BXX3 1397 aa17.56■□□□□ 0.4
TSPAN6-201ENST00000373020 CCDC7Q96M83 1385 aa17.56■□□□□ 0.4
TSPAN6-201ENST00000373020 KDM5DQ9BY66 1539 aa17.55■□□□□ 0.4
TSPAN6-201ENST00000373020 NBPF8Q3BBV2 869 aa17.55■□□□□ 0.4
TSPAN6-201ENST00000373020 FBLN2P98095 1184 aa17.55■□□□□ 0.4
TSPAN6-201ENST00000373020 ARHGEF5Q12774 1597 aa17.54■□□□□ 0.4
TSPAN6-201ENST00000373020 ANKRD50Q9ULJ7 1429 aa17.52■□□□□ 0.4
TSPAN6-201ENST00000373020 C9orf84Q5VXU9 1444 aa17.51■□□□□ 0.39
TSPAN6-201ENST00000373020 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
TSPAN6-201ENST00000373020 C11orf95C9JLR9 678 aaPredicted RBP17.49■□□□□ 0.39
TSPAN6-201ENST00000373020 PREX2Q70Z35 1606 aa17.49■□□□□ 0.39
TSPAN6-201ENST00000373020 ZNF777Q9ULD5 760 aaPredicted RBP17.48■□□□□ 0.39
TSPAN6-201ENST00000373020 PTPRGP23470 1445 aa17.47■□□□□ 0.39
TSPAN6-201ENST00000373020 SHROOM2Q13796 1616 aa17.47■□□□□ 0.39
TSPAN6-201ENST00000373020 FKBP8Q14318 412 aa17.47■□□□□ 0.39
TSPAN6-201ENST00000373020 ARHGEF12Q9NZN5 1544 aa17.46■□□□□ 0.39
TSPAN6-201ENST00000373020 CHD1O14646 1710 aa17.45■□□□□ 0.38
TSPAN6-201ENST00000373020 CDC42BPBQ9Y5S2 1711 aa17.45■□□□□ 0.38
TSPAN6-201ENST00000373020 UHRF1BP1Q6BDS2 1440 aa17.45■□□□□ 0.38
TSPAN6-201ENST00000373020 SAMD9LQ8IVG5 1584 aa17.45■□□□□ 0.38
TSPAN6-201ENST00000373020 KDM5CP41229 1560 aa17.44■□□□□ 0.38
TSPAN6-201ENST00000373020 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
TSPAN6-201ENST00000373020 PKD2Q13563 968 aa17.43■□□□□ 0.38
TSPAN6-201ENST00000373020 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
TSPAN6-201ENST00000373020 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
TSPAN6-201ENST00000373020 CCDC141Q6ZP82 1450 aa17.42■□□□□ 0.38
TSPAN6-201ENST00000373020 RALGAPBQ86X10 1494 aa17.42■□□□□ 0.38
TSPAN6-201ENST00000373020 BCORL1Q5H9F3 1711 aa17.42■□□□□ 0.38
TSPAN6-201ENST00000373020 NEFLP07196 543 aa17.42■□□□□ 0.38
TSPAN6-201ENST00000373020 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
TSPAN6-201ENST00000373020 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
TSPAN6-201ENST00000373020 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.37
TSPAN6-201ENST00000373020 NUP155O75694 1391 aa17.39■□□□□ 0.37
TSPAN6-201ENST00000373020 USP47Q96K76 1375 aa17.39■□□□□ 0.37
TSPAN6-201ENST00000373020 BCANQ96GW7 911 aa17.37■□□□□ 0.37
TSPAN6-201ENST00000373020 TTC37Q6PGP7 1564 aa17.37■□□□□ 0.37
TSPAN6-201ENST00000373020 UNC13BO14795 1591 aa17.36■□□□□ 0.37
TSPAN6-201ENST00000373020 TSPY4P0CV99 314 aa17.36■□□□□ 0.37
TSPAN6-201ENST00000373020 TSPY10P0CW01 314 aa17.36■□□□□ 0.37
TSPAN6-201ENST00000373020 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
TSPAN6-201ENST00000373020 DHX29Q7Z478 1369 aaKnown RBP17.35■□□□□ 0.37
TSPAN6-201ENST00000373020 ARID4BQ4LE39 1312 aaPredicted RBP17.35■□□□□ 0.37
TSPAN6-201ENST00000373020 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
TSPAN6-201ENST00000373020 FAM135AQ9P2D6 1515 aa17.34■□□□□ 0.37
TSPAN6-201ENST00000373020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
TSPAN6-201ENST00000373020 PLXNC1O60486 1568 aa17.34■□□□□ 0.37
TSPAN6-201ENST00000373020 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
TSPAN6-201ENST00000373020 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
TSPAN6-201ENST00000373020 RSPH4AQ5TD94 716 aa17.32■□□□□ 0.36
TSPAN6-201ENST00000373020 MYO5CQ9NQX4 1742 aa17.32■□□□□ 0.36
TSPAN6-201ENST00000373020 MYT1Q01538 1121 aa17.31■□□□□ 0.36
TSPAN6-201ENST00000373020 ARHGAP5Q13017 1502 aa17.3■□□□□ 0.36
TSPAN6-201ENST00000373020 ERCC6L2Q5T890 1561 aa17.29■□□□□ 0.36
TSPAN6-201ENST00000373020 MRS2Q9HD23 443 aa17.29■□□□□ 0.36
TSPAN6-201ENST00000373020 ZBED9Q6R2W3 1325 aa17.29■□□□□ 0.36
TSPAN6-201ENST00000373020 ROCK2O75116 1388 aaKnown RBP17.29■□□□□ 0.36
TSPAN6-201ENST00000373020 PLEKHH2Q8IVE3 1493 aa17.28■□□□□ 0.36
TSPAN6-201ENST00000373020 IQGAP3Q86VI3 1631 aa17.28■□□□□ 0.36
TSPAN6-201ENST00000373020 E9PCH4 1651 aa17.27■□□□□ 0.36
TSPAN6-201ENST00000373020 TRPM1Q7Z4N2 1603 aa17.26■□□□□ 0.35
TSPAN6-201ENST00000373020 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms