RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 RGS3P49796 1198 aa18.23■□□□□ 0.51
UBR2-201ENST00000372899 MSNP26038 577 aaKnown RBP18.23■□□□□ 0.51
UBR2-201ENST00000372899 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
UBR2-201ENST00000372899 MARCH6O60337 910 aa18.22■□□□□ 0.51
UBR2-201ENST00000372899 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
UBR2-201ENST00000372899 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
UBR2-201ENST00000372899 HTATSF1O43719 755 aaKnown RBP18.21■□□□□ 0.51
UBR2-201ENST00000372899 FRAT2O75474 233 aaPredicted RBP18.21■□□□□ 0.51
UBR2-201ENST00000372899 GPATCH3Q96I76 525 aa18.21■□□□□ 0.51
UBR2-201ENST00000372899 TCEAL9Q9UHQ7 104 aa18.21■□□□□ 0.51
UBR2-201ENST00000372899 GTF2E1P29083 439 aaPredicted RBP18.2■□□□□ 0.5
UBR2-201ENST00000372899 ANO8Q9HCE9 1232 aaPredicted RBP18.2■□□□□ 0.5
UBR2-201ENST00000372899 CWC22Q9HCG8 908 aaKnown RBP18.19■□□□□ 0.5
UBR2-201ENST00000372899 CTDP1Q9Y5B0 961 aaPredicted RBP18.18■□□□□ 0.5
UBR2-201ENST00000372899 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
UBR2-201ENST00000372899 MSH5O43196 834 aa18.18■□□□□ 0.5
UBR2-201ENST00000372899 CREBRFQ8IUR6 639 aa18.16■□□□□ 0.5
UBR2-201ENST00000372899 MEX3CQ5U5Q3 659 aaKnown RBP18.16■□□□□ 0.5
UBR2-201ENST00000372899 FBXO3Q9UK99 471 aa18.16■□□□□ 0.5
UBR2-201ENST00000372899 GOLGA6L1Q8N7Z2 621 aa18.16■□□□□ 0.5
UBR2-201ENST00000372899 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
UBR2-201ENST00000372899 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
UBR2-201ENST00000372899 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
UBR2-201ENST00000372899 USP35Q9P2H5 1018 aa18.14■□□□□ 0.49
UBR2-201ENST00000372899 CHMP4AQ9BY43 222 aa18.14■□□□□ 0.49
UBR2-201ENST00000372899 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
UBR2-201ENST00000372899 APBB1O00213 710 aa18.13■□□□□ 0.49
UBR2-201ENST00000372899 STK26Q9P289 416 aa18.12■□□□□ 0.49
UBR2-201ENST00000372899 TMF1P82094 1093 aa18.12■□□□□ 0.49
UBR2-201ENST00000372899 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
UBR2-201ENST00000372899 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
UBR2-201ENST00000372899 CALD1Q05682 793 aaKnown RBP18.11■□□□□ 0.49
UBR2-201ENST00000372899 SPAG9O60271 1321 aaKnown RBP18.11■□□□□ 0.49
UBR2-201ENST00000372899 WWC1Q8IX03 1113 aa18.1■□□□□ 0.49
UBR2-201ENST00000372899 IPO8O15397 1037 aaKnown RBP18.07■□□□□ 0.48
UBR2-201ENST00000372899 CLIP1P30622 1438 aa18.06■□□□□ 0.48
UBR2-201ENST00000372899 SPRYD3Q8NCJ5 442 aa18.06■□□□□ 0.48
UBR2-201ENST00000372899 HDAC5Q9UQL6 1122 aa18.06■□□□□ 0.48
UBR2-201ENST00000372899 TOMM22Q9NS69 142 aa18.05■□□□□ 0.48
UBR2-201ENST00000372899 EVA1CP58658 441 aa18.05■□□□□ 0.48
UBR2-201ENST00000372899 NOL10Q9BSC4 688 aaKnown RBP18.04■□□□□ 0.48
UBR2-201ENST00000372899 EID1Q9Y6B2 187 aa18.04■□□□□ 0.48
UBR2-201ENST00000372899 PTMSP20962 102 aa18.04■□□□□ 0.48
UBR2-201ENST00000372899 EIF4G1Q04637 1599 aaKnown RBP18.03■□□□□ 0.48
UBR2-201ENST00000372899 KLHL34Q8N239 644 aa18.03■□□□□ 0.48
UBR2-201ENST00000372899 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
UBR2-201ENST00000372899 SYAP1Q96A49 352 aaPredicted RBP18.02■□□□□ 0.48
UBR2-201ENST00000372899 TPM3P06753 285 aa18.02■□□□□ 0.48
UBR2-201ENST00000372899 STK31Q9BXU1 1019 aa18.02■□□□□ 0.48
UBR2-201ENST00000372899 PES1O00541 588 aaKnown RBP18.02■□□□□ 0.47
UBR2-201ENST00000372899 RAD21O60216 631 aa18.02■□□□□ 0.47
UBR2-201ENST00000372899 TPD52L1Q16890 204 aaPredicted RBP18.01■□□□□ 0.47
UBR2-201ENST00000372899 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
UBR2-201ENST00000372899 CSPP1Q1MSJ5 1256 aa18.01■□□□□ 0.47
UBR2-201ENST00000372899 GGT6Q6P531 493 aa18■□□□□ 0.47
UBR2-201ENST00000372899 TPM2P07951 284 aa18■□□□□ 0.47
UBR2-201ENST00000372899 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
UBR2-201ENST00000372899 TSR1Q2NL82 804 aaKnown RBP17.99■□□□□ 0.47
UBR2-201ENST00000372899 DCAF11Q8TEB1 546 aa17.97■□□□□ 0.47
UBR2-201ENST00000372899 AKAP17AQ02040 695 aaKnown RBP17.96■□□□□ 0.47
UBR2-201ENST00000372899 FBXW7Q969H0 707 aa17.96■□□□□ 0.46
UBR2-201ENST00000372899 TNNT3P45378 269 aaPredicted RBP17.95■□□□□ 0.46
UBR2-201ENST00000372899 GBP4Q96PP9 640 aa17.95■□□□□ 0.46
UBR2-201ENST00000372899 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
UBR2-201ENST00000372899 NGDNQ8NEJ9 315 aaKnown RBP17.94■□□□□ 0.46
UBR2-201ENST00000372899 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■■■ 57
UBR2-201ENST00000372899 ITPRIPQ8IWB1 547 aa17.93■□□□□ 0.46
UBR2-201ENST00000372899 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
UBR2-201ENST00000372899 RTN4Q9NQC3 1192 aaKnown RBP17.92■□□□□ 0.46
UBR2-201ENST00000372899 KIF3AQ9Y496 699 aa17.91■□□□□ 0.46
UBR2-201ENST00000372899 AMPHP49418 695 aa17.91■□□□□ 0.46
UBR2-201ENST00000372899 SF3A1Q15459 793 aaKnown RBP17.91■□□□□ 0.46
UBR2-201ENST00000372899 CCDC43Q96MW1 224 aaKnown RBP17.91■□□□□ 0.46
UBR2-201ENST00000372899 SETQ01105 290 aaPredicted RBP17.9■□□□□ 0.46
UBR2-201ENST00000372899 B4GALNT3Q6L9W6 998 aa17.9■□□□□ 0.46
UBR2-201ENST00000372899 HMMRO75330 724 aa17.89■□□□□ 0.45
UBR2-201ENST00000372899 MIER1Q8N108 512 aa17.88■□□□□ 0.45
UBR2-201ENST00000372899 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
UBR2-201ENST00000372899 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
UBR2-201ENST00000372899 VPS37DQ86XT2 251 aa17.87■□□□□ 0.45
UBR2-201ENST00000372899 PPP4R2Q9NY27 417 aa17.87■□□□□ 0.45
UBR2-201ENST00000372899 LTV1Q96GA3 475 aaPredicted RBP17.86■□□□□ 0.45
UBR2-201ENST00000372899 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
UBR2-201ENST00000372899 U2AF1L5P0DN76 240 aaPredicted RBP17.86■□□□□ 0.45
UBR2-201ENST00000372899 U2AF1Q01081 240 aaKnown RBP eCLIP17.86■□□□□ 0.457e-7■■■■□ 23.3
UBR2-201ENST00000372899 CCDC70Q6NSX1 233 aa17.86■□□□□ 0.45
UBR2-201ENST00000372899 SYNE3Q6ZMZ3 975 aa17.86■□□□□ 0.45
UBR2-201ENST00000372899 TPM1P09493 284 aa17.85■□□□□ 0.45
UBR2-201ENST00000372899 H3BQV1 296 aa17.85■□□□□ 0.45
UBR2-201ENST00000372899 IFFO2Q5TF58 517 aa17.85■□□□□ 0.45
UBR2-201ENST00000372899 C1orf141Q5JVX7 400 aa17.84■□□□□ 0.45
UBR2-201ENST00000372899 R3HCC1Q9Y3T6 440 aaKnown RBP17.84■□□□□ 0.45
UBR2-201ENST00000372899 PHF14O94880 888 aa17.83■□□□□ 0.44
UBR2-201ENST00000372899 LRRFIP1Q32MZ4 808 aaKnown RBP17.83■□□□□ 0.44
UBR2-201ENST00000372899 WWC2Q6AWC2 1192 aa17.83■□□□□ 0.44
UBR2-201ENST00000372899 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.83■□□□□ 0.44
UBR2-201ENST00000372899 GOLGA3Q08378 1498 aa17.83■□□□□ 0.44
UBR2-201ENST00000372899 EIF3AQ14152 1382 aaKnown RBP17.82■□□□□ 0.44
UBR2-201ENST00000372899 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
UBR2-201ENST00000372899 DHX16O60231 1041 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms