RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 CAMSAP2Q08AD1 1489 aa25.85■■□□□ 1.73
CTSA-204ENST00000372484 ROCK1Q13464 1354 aa25.85■■□□□ 1.73
CTSA-204ENST00000372484 KDM6BO15054 1643 aa25.85■■□□□ 1.73
CTSA-204ENST00000372484 TRIM52Q96A61 297 aa25.8■■□□□ 1.72
CTSA-204ENST00000372484 CDC42BPAQ5VT25 1732 aa25.8■■□□□ 1.72
CTSA-204ENST00000372484 ZNF777Q9ULD5 760 aaPredicted RBP25.79■■□□□ 1.72
CTSA-204ENST00000372484 ABCC10Q5T3U5 1492 aa25.78■■□□□ 1.72
CTSA-204ENST00000372484 ERCC6L2Q5T890 1561 aa25.77■■□□□ 1.72
CTSA-204ENST00000372484 TONSLQ96HA7 1378 aa25.75■■□□□ 1.71
CTSA-204ENST00000372484 MIER1Q8N108 512 aa25.75■■□□□ 1.71
CTSA-204ENST00000372484 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
CTSA-204ENST00000372484 PPP1R15AO75807 674 aaPredicted RBP25.73■■□□□ 1.71
CTSA-204ENST00000372484 ACIN1Q9UKV3 1341 aaKnown RBP25.73■■□□□ 1.71
CTSA-204ENST00000372484 CROCC2H7BZ55 1655 aa25.72■■□□□ 1.71
CTSA-204ENST00000372484 ADGBQ8N7X0 1667 aa25.72■■□□□ 1.71
CTSA-204ENST00000372484 DENND4BO75064 1496 aaPredicted RBP25.71■■□□□ 1.71
CTSA-204ENST00000372484 MPHOSPH9Q99550 1183 aa25.69■■□□□ 1.7
CTSA-204ENST00000372484 ABCC2Q92887 1545 aa25.68■■□□□ 1.7
CTSA-204ENST00000372484 NCOA1Q15788 1441 aa25.67■■□□□ 1.7
CTSA-204ENST00000372484 ADGRL2O95490 1459 aa25.66■■□□□ 1.7
CTSA-204ENST00000372484 ANKRD30AQ9BXX3 1397 aa25.62■■□□□ 1.69
CTSA-204ENST00000372484 PREX2Q70Z35 1606 aa25.6■■□□□ 1.69
CTSA-204ENST00000372484 CDC42BPBQ9Y5S2 1711 aa25.6■■□□□ 1.69
CTSA-204ENST00000372484 SHANK2Q9UPX8 1470 aa25.58■■□□□ 1.69
CTSA-204ENST00000372484 CENPBP07199 599 aaPredicted RBP25.57■■□□□ 1.68
CTSA-204ENST00000372484 FOXD1Q16676 465 aa25.57■■□□□ 1.68
CTSA-204ENST00000372484 C9orf84Q5VXU9 1444 aa25.56■■□□□ 1.68
CTSA-204ENST00000372484 SLC4A1APQ9BWU0 796 aaKnown RBP25.55■■□□□ 1.68
CTSA-204ENST00000372484 ARHGEF5Q12774 1597 aa25.54■■□□□ 1.68
CTSA-204ENST00000372484 TTC37Q6PGP7 1564 aa25.54■■□□□ 1.68
CTSA-204ENST00000372484 TSPY4P0CV99 314 aa25.54■■□□□ 1.68
CTSA-204ENST00000372484 TSPY10P0CW01 314 aa25.54■■□□□ 1.68
CTSA-204ENST00000372484 KDM5BQ9UGL1 1544 aa25.54■■□□□ 1.68
CTSA-204ENST00000372484 SAMD9LQ8IVG5 1584 aa25.53■■□□□ 1.68
CTSA-204ENST00000372484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.53■■□□□ 1.68
CTSA-204ENST00000372484 HNRNPMP52272 730 aaKnown RBP eCLIP25.53■■□□□ 1.68
CTSA-204ENST00000372484 UHRF1BP1LA0JNW5 1464 aa25.53■■□□□ 1.68
CTSA-204ENST00000372484 ZCCHC11Q5TAX3 1644 aaKnown RBP25.52■■□□□ 1.68
CTSA-204ENST00000372484 ANKRD50Q9ULJ7 1429 aa25.52■■□□□ 1.68
CTSA-204ENST00000372484 ANKRD30BQ9BXX2 1392 aa25.51■■□□□ 1.67
CTSA-204ENST00000372484 MBD5Q9P267 1494 aa25.51■■□□□ 1.67
CTSA-204ENST00000372484 PZPP20742 1482 aa25.5■■□□□ 1.67
CTSA-204ENST00000372484 ARHGAP5Q13017 1502 aa25.49■■□□□ 1.67
CTSA-204ENST00000372484 YTHDC1Q96MU7 727 aaKnown RBP25.49■■□□□ 1.67
CTSA-204ENST00000372484 MYO5CQ9NQX4 1742 aa25.48■■□□□ 1.67
CTSA-204ENST00000372484 CCDC141Q6ZP82 1450 aa25.47■■□□□ 1.67
CTSA-204ENST00000372484 KCNH8Q96L42 1107 aa25.47■■□□□ 1.67
CTSA-204ENST00000372484 RSPH4AQ5TD94 716 aa25.45■■□□□ 1.66
CTSA-204ENST00000372484 HIRIP3Q9BW71 556 aaPredicted RBP25.45■■□□□ 1.66
CTSA-204ENST00000372484 RPRD2Q5VT52 1461 aaKnown RBP25.45■■□□□ 1.66
CTSA-204ENST00000372484 KIF15Q9NS87 1388 aa25.43■■□□□ 1.66
CTSA-204ENST00000372484 SYCP2Q9BX26 1530 aa25.42■■□□□ 1.66
CTSA-204ENST00000372484 L3MBTL2Q969R5 705 aa25.41■■□□□ 1.66
CTSA-204ENST00000372484 SCAF1Q9H7N4 1312 aaKnown RBP25.39■■□□□ 1.65
CTSA-204ENST00000372484 DDX10Q13206 875 aaKnown RBP25.39■■□□□ 1.65
CTSA-204ENST00000372484 KIAA1107Q9UPP5 1409 aa25.38■■□□□ 1.65
CTSA-204ENST00000372484 PLEKHH2Q8IVE3 1493 aa25.37■■□□□ 1.65
CTSA-204ENST00000372484 NUP155O75694 1391 aa25.36■■□□□ 1.65
CTSA-204ENST00000372484 PKD2Q13563 968 aa25.36■■□□□ 1.65
CTSA-204ENST00000372484 PLCH2O75038 1416 aa25.35■■□□□ 1.65
CTSA-204ENST00000372484 TEX14Q8IWB6 1497 aa25.34■■□□□ 1.65
CTSA-204ENST00000372484 MAST1Q9Y2H9 1570 aa25.33■■□□□ 1.65
CTSA-204ENST00000372484 KDM5DQ9BY66 1539 aa25.32■■□□□ 1.64
CTSA-204ENST00000372484 EFCAB2Q5VUJ9 269 aa25.3■■□□□ 1.64
CTSA-204ENST00000372484 OSCARQ8IYS5 282 aa25.28■■□□□ 1.64
CTSA-204ENST00000372484 ARHGEF12Q9NZN5 1544 aa25.27■■□□□ 1.64
CTSA-204ENST00000372484 WDR7Q9Y4E6 1490 aa25.25■■□□□ 1.63
CTSA-204ENST00000372484 PLXNC1O60486 1568 aa25.25■■□□□ 1.63
CTSA-204ENST00000372484 HSPA5P11021 654 aaKnown RBP25.24■■□□□ 1.63
CTSA-204ENST00000372484 ABCC1P33527 1531 aa25.23■■□□□ 1.63
CTSA-204ENST00000372484 EIF4G2P78344 907 aaKnown RBP eCLIP25.23■■□□□ 1.63
CTSA-204ENST00000372484 NBPF8Q3BBV2 869 aa25.22■■□□□ 1.63
CTSA-204ENST00000372484 ARAP3Q8WWN8 1544 aa25.21■■□□□ 1.63
CTSA-204ENST00000372484 FAM135AQ9P2D6 1515 aa25.2■■□□□ 1.63
CTSA-204ENST00000372484 UNC13BO14795 1591 aa25.17■■□□□ 1.62
CTSA-204ENST00000372484 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
CTSA-204ENST00000372484 TRAPPC8Q9Y2L5 1435 aa25.16■■□□□ 1.62
CTSA-204ENST00000372484 GTF3C3Q9Y5Q9 886 aa25.15■■□□□ 1.62
CTSA-204ENST00000372484 ABCA9Q8IUA7 1624 aa25.14■■□□□ 1.61
CTSA-204ENST00000372484 ASXL2Q76L83 1435 aa25.13■■□□□ 1.61
CTSA-204ENST00000372484 ANP32CO43423 234 aa25.12■■□□□ 1.61
CTSA-204ENST00000372484 ERBINQ96RT1 1412 aa25.11■■□□□ 1.61
CTSA-204ENST00000372484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.11■■□□□ 1.615e-7■□□□□ 10.4
CTSA-204ENST00000372484 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
CTSA-204ENST00000372484 FANCAO15360 1455 aa25.1■■□□□ 1.61
CTSA-204ENST00000372484 IQGAP3Q86VI3 1631 aa25.09■■□□□ 1.61
CTSA-204ENST00000372484 SPAG9O60271 1321 aaKnown RBP25.08■■□□□ 1.61
CTSA-204ENST00000372484 NPM1P06748 294 aaKnown RBP eCLIP25.07■■□□□ 1.6
CTSA-204ENST00000372484 ZNF326Q5BKZ1 582 aaKnown RBP25.07■■□□□ 1.6
CTSA-204ENST00000372484 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
CTSA-204ENST00000372484 RTEL1-TNFRSF6BF6WH68 1400 aa25.05■■□□□ 1.6
CTSA-204ENST00000372484 SPATA31E1Q6ZUB1 1445 aa25.04■■□□□ 1.6
CTSA-204ENST00000372484 MAGI2Q86UL8 1455 aa25.04■■□□□ 1.6
CTSA-204ENST00000372484 ZFYVE16Q7Z3T8 1539 aa25.04■■□□□ 1.6
CTSA-204ENST00000372484 UHRF1BP1Q6BDS2 1440 aa25.02■■□□□ 1.6
CTSA-204ENST00000372484 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
CTSA-204ENST00000372484 CCER2I3L3R5 266 aa25.01■■□□□ 1.59
CTSA-204ENST00000372484 ADGRL1O94910 1474 aa25■■□□□ 1.59
CTSA-204ENST00000372484 C11orf95C9JLR9 678 aaPredicted RBP24.99■■□□□ 1.59
CTSA-204ENST00000372484 CCDC7Q96M83 1385 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms