RNA–Protein interactions for RNA: ENST00000372207.3

BEST4-201, Transcript of bestrophin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST4, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4-201ENST00000372207 UHRF1BP1LA0JNW5 1464 aa29.07■■■□□ 2.24
BEST4-201ENST00000372207 DNMT1P26358 1616 aaKnown RBP29.04■■■□□ 2.24
BEST4-201ENST00000372207 ROCK1Q13464 1354 aa29.03■■■□□ 2.24
BEST4-201ENST00000372207 KDM5BQ9UGL1 1544 aa28.99■■■□□ 2.23
BEST4-201ENST00000372207 CDC42BPAQ5VT25 1732 aa28.98■■■□□ 2.23
BEST4-201ENST00000372207 KCNH8Q96L42 1107 aa28.95■■■□□ 2.23
BEST4-201ENST00000372207 GCC2Q8IWJ2 1684 aa28.94■■■□□ 2.22
BEST4-201ENST00000372207 SIN3AQ96ST3 1273 aa28.93■■■□□ 2.22
BEST4-201ENST00000372207 ZCCHC11Q5TAX3 1644 aaKnown RBP28.91■■■□□ 2.22
BEST4-201ENST00000372207 ZNF316A6NFI3 1004 aaPredicted RBP28.9■■■□□ 2.22
BEST4-201ENST00000372207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.89■■■□□ 2.22
BEST4-201ENST00000372207 NEUROD1Q13562 356 aa28.89■■■□□ 2.21
BEST4-201ENST00000372207 TRIM52Q96A61 297 aa28.89■■■□□ 2.21
BEST4-201ENST00000372207 KDM6BO15054 1643 aa28.89■■■□□ 2.21
BEST4-201ENST00000372207 NCOA1Q15788 1441 aa28.88■■■□□ 2.21
BEST4-201ENST00000372207 TTC37Q6PGP7 1564 aa28.86■■■□□ 2.21
BEST4-201ENST00000372207 HNRNPMP52272 730 aaKnown RBP eCLIP28.86■■■□□ 2.21
BEST4-201ENST00000372207 PREX2Q70Z35 1606 aa28.83■■■□□ 2.21
BEST4-201ENST00000372207 ADGRL2O95490 1459 aa28.83■■■□□ 2.21
BEST4-201ENST00000372207 ACIN1Q9UKV3 1341 aaKnown RBP28.83■■■□□ 2.21
BEST4-201ENST00000372207 ANKRD30AQ9BXX3 1397 aa28.82■■■□□ 2.2
BEST4-201ENST00000372207 TSPY4P0CV99 314 aa28.82■■■□□ 2.2
BEST4-201ENST00000372207 TSPY10P0CW01 314 aa28.82■■■□□ 2.2
BEST4-201ENST00000372207 MBD5Q9P267 1494 aa28.81■■■□□ 2.2
BEST4-201ENST00000372207 CDC42BPBQ9Y5S2 1711 aa28.81■■■□□ 2.2
BEST4-201ENST00000372207 TIMELESSQ9UNS1 1208 aa28.81■■■□□ 2.2
BEST4-201ENST00000372207 SHANK2Q9UPX8 1470 aa28.79■■■□□ 2.2
BEST4-201ENST00000372207 ARHGAP5Q13017 1502 aa28.79■■■□□ 2.2
BEST4-201ENST00000372207 MPHOSPH9Q99550 1183 aa28.79■■■□□ 2.2
BEST4-201ENST00000372207 SAMD9LQ8IVG5 1584 aa28.78■■■□□ 2.2
BEST4-201ENST00000372207 C9orf84Q5VXU9 1444 aa28.78■■■□□ 2.2
BEST4-201ENST00000372207 RSPH4AQ5TD94 716 aa28.78■■■□□ 2.2
BEST4-201ENST00000372207 CROCC2H7BZ55 1655 aa28.78■■■□□ 2.2
BEST4-201ENST00000372207 PLCH2O75038 1416 aa28.75■■■□□ 2.19
BEST4-201ENST00000372207 ARHGEF5Q12774 1597 aa28.75■■■□□ 2.19
BEST4-201ENST00000372207 DENND4BO75064 1496 aaPredicted RBP28.75■■■□□ 2.19
BEST4-201ENST00000372207 ADGBQ8N7X0 1667 aa28.73■■■□□ 2.19
BEST4-201ENST00000372207 WDR7Q9Y4E6 1490 aa28.73■■■□□ 2.19
BEST4-201ENST00000372207 DIEXFQ68CQ4 756 aaKnown RBP28.72■■■□□ 2.19
BEST4-201ENST00000372207 CCDC141Q6ZP82 1450 aa28.72■■■□□ 2.19
BEST4-201ENST00000372207 EFCAB2Q5VUJ9 269 aa28.7■■■□□ 2.19
BEST4-201ENST00000372207 ANKRD50Q9ULJ7 1429 aa28.7■■■□□ 2.18
BEST4-201ENST00000372207 KIAA1107Q9UPP5 1409 aa28.7■■■□□ 2.18
BEST4-201ENST00000372207 MYO5CQ9NQX4 1742 aa28.7■■■□□ 2.18
BEST4-201ENST00000372207 SYCP2Q9BX26 1530 aa28.67■■■□□ 2.18
BEST4-201ENST00000372207 PLEKHH2Q8IVE3 1493 aa28.67■■■□□ 2.18
BEST4-201ENST00000372207 NPM1P06748 294 aaKnown RBP eCLIP28.66■■■□□ 2.18
BEST4-201ENST00000372207 SLC4A1APQ9BWU0 796 aaKnown RBP28.65■■■□□ 2.18
BEST4-201ENST00000372207 ASXL2Q76L83 1435 aa28.65■■■□□ 2.18
BEST4-201ENST00000372207 KIF15Q9NS87 1388 aa28.64■■■□□ 2.18
BEST4-201ENST00000372207 TONSLQ96HA7 1378 aa28.64■■■□□ 2.17
BEST4-201ENST00000372207 FOXD1Q16676 465 aa28.64■■■□□ 2.17
BEST4-201ENST00000372207 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
BEST4-201ENST00000372207 ARHGEF12Q9NZN5 1544 aa28.6■■■□□ 2.17
BEST4-201ENST00000372207 PZPP20742 1482 aa28.57■■■□□ 2.16
BEST4-201ENST00000372207 ARAP3Q8WWN8 1544 aa28.56■■■□□ 2.16
BEST4-201ENST00000372207 ANKRD30BQ9BXX2 1392 aa28.56■■■□□ 2.16
BEST4-201ENST00000372207 MAST1Q9Y2H9 1570 aa28.52■■■□□ 2.16
BEST4-201ENST00000372207 ABCC1P33527 1531 aa28.52■■■□□ 2.16
BEST4-201ENST00000372207 NUP155O75694 1391 aa28.51■■■□□ 2.16
BEST4-201ENST00000372207 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
BEST4-201ENST00000372207 TRAPPC8Q9Y2L5 1435 aa28.5■■■□□ 2.15
BEST4-201ENST00000372207 FANCAO15360 1455 aa28.48■■■□□ 2.15
BEST4-201ENST00000372207 PKD2Q13563 968 aa28.47■■■□□ 2.15
BEST4-201ENST00000372207 AFAP1Q8N556 730 aa28.45■■■□□ 2.15
BEST4-201ENST00000372207 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
BEST4-201ENST00000372207 PLXNC1O60486 1568 aa28.41■■■□□ 2.14
BEST4-201ENST00000372207 RPRD2Q5VT52 1461 aaKnown RBP28.41■■■□□ 2.14
BEST4-201ENST00000372207 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
BEST4-201ENST00000372207 KDM5DQ9BY66 1539 aa28.4■■■□□ 2.14
BEST4-201ENST00000372207 L3MBTL2Q969R5 705 aa28.39■■■□□ 2.14
BEST4-201ENST00000372207 RTEL1-TNFRSF6BF6WH68 1400 aa28.36■■■□□ 2.13
BEST4-201ENST00000372207 DUOX2Q9NRD8 1548 aa28.36■■■□□ 2.13
BEST4-201ENST00000372207 ADGRL1O94910 1474 aa28.36■■■□□ 2.13
BEST4-201ENST00000372207 SCAPERQ9BY12 1400 aa28.35■■■□□ 2.13
BEST4-201ENST00000372207 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
BEST4-201ENST00000372207 ERBINQ96RT1 1412 aa28.33■■■□□ 2.12
BEST4-201ENST00000372207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.31■■■□□ 2.12
BEST4-201ENST00000372207 RIMBP3CA6NJZ7 1639 aa28.3■■■□□ 2.12
BEST4-201ENST00000372207 RIMBP3BA6NNM3 1639 aa28.3■■■□□ 2.12
BEST4-201ENST00000372207 RIMBP3Q9UFD9 1639 aa28.3■■■□□ 2.12
BEST4-201ENST00000372207 FAM135AQ9P2D6 1515 aa28.29■■■□□ 2.12
BEST4-201ENST00000372207 ZFYVE16Q7Z3T8 1539 aa28.28■■■□□ 2.12
BEST4-201ENST00000372207 TEX14Q8IWB6 1497 aa28.27■■■□□ 2.12
BEST4-201ENST00000372207 UNC13BO14795 1591 aa28.25■■■□□ 2.11
BEST4-201ENST00000372207 MIER1Q8N108 512 aa28.24■■■□□ 2.11
BEST4-201ENST00000372207 HIRIP3Q9BW71 556 aaPredicted RBP28.23■■■□□ 2.11
BEST4-201ENST00000372207 MYT1LQ9UL68 1186 aa28.23■■■□□ 2.11
BEST4-201ENST00000372207 ATP7AQ04656 1500 aa28.21■■■□□ 2.11
BEST4-201ENST00000372207 MAGI2Q86UL8 1455 aa28.19■■■□□ 2.1
BEST4-201ENST00000372207 INO80Q9ULG1 1556 aaPredicted RBP28.18■■■□□ 2.1
BEST4-201ENST00000372207 ZNF518AQ6AHZ1 1483 aa28.17■■■□□ 2.1
BEST4-201ENST00000372207 NBPF8Q3BBV2 869 aa28.17■■■□□ 2.1
BEST4-201ENST00000372207 IQGAP3Q86VI3 1631 aa28.14■■■□□ 2.1
BEST4-201ENST00000372207 CFAP74Q9C0B2 1584 aa28.13■■■□□ 2.09
BEST4-201ENST00000372207 DHX29Q7Z478 1369 aaKnown RBP28.12■■■□□ 2.09
BEST4-201ENST00000372207 POGZQ7Z3K3 1410 aa28.12■■■□□ 2.09
BEST4-201ENST00000372207 NEO1Q92859 1461 aa28.11■■■□□ 2.09
BEST4-201ENST00000372207 PLA2R1Q13018 1463 aa28.09■■■□□ 2.09
BEST4-201ENST00000372207 KIF3BO15066 747 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms