RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 CDC42BPAQ5VT25 1732 aa33.41■■■□□ 2.94
TTC39A-203ENST00000371747 ZCCHC11Q5TAX3 1644 aaKnown RBP33.41■■■□□ 2.94
TTC39A-203ENST00000371747 ABCC5O15440 1437 aa33.41■■■□□ 2.94
TTC39A-203ENST00000371747 GCC2Q8IWJ2 1684 aa33.4■■■□□ 2.94
TTC39A-203ENST00000371747 RRP7BPQ9NSQ0 103 aa33.39■■■□□ 2.94
TTC39A-203ENST00000371747 ROCK1Q13464 1354 aa33.34■■■□□ 2.93
TTC39A-203ENST00000371747 ZNF777Q9ULD5 760 aaPredicted RBP33.33■■■□□ 2.93
TTC39A-203ENST00000371747 KDM6BO15054 1643 aa33.24■■■□□ 2.91
TTC39A-203ENST00000371747 CROCC2H7BZ55 1655 aa33.22■■■□□ 2.91
TTC39A-203ENST00000371747 RIMBP3CA6NJZ7 1639 aa33.21■■■□□ 2.91
TTC39A-203ENST00000371747 RIMBP3BA6NNM3 1639 aa33.21■■■□□ 2.91
TTC39A-203ENST00000371747 PREX2Q70Z35 1606 aa33.21■■■□□ 2.91
TTC39A-203ENST00000371747 RIMBP3Q9UFD9 1639 aa33.21■■■□□ 2.91
TTC39A-203ENST00000371747 KCNH8Q96L42 1107 aa33.21■■■□□ 2.91
TTC39A-203ENST00000371747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.2■■■□□ 2.91
TTC39A-203ENST00000371747 CDC42BPBQ9Y5S2 1711 aa33.2■■■□□ 2.9
TTC39A-203ENST00000371747 TTC37Q6PGP7 1564 aa33.19■■■□□ 2.9
TTC39A-203ENST00000371747 ZNF316A6NFI3 1004 aaPredicted RBP33.18■■■□□ 2.9
TTC39A-203ENST00000371747 ADGBQ8N7X0 1667 aa33.17■■■□□ 2.9
TTC39A-203ENST00000371747 SIN3AQ96ST3 1273 aa33.16■■■□□ 2.9
TTC39A-203ENST00000371747 ADGRL2O95490 1459 aa33.15■■■□□ 2.9
TTC39A-203ENST00000371747 NCOA1Q15788 1441 aa33.13■■■□□ 2.89
TTC39A-203ENST00000371747 CYB5RLQ6IPT4 315 aa33.12■■■□□ 2.89
TTC39A-203ENST00000371747 SAMD9LQ8IVG5 1584 aa33.11■■■□□ 2.89
TTC39A-203ENST00000371747 WDR7Q9Y4E6 1490 aa33.1■■■□□ 2.89
TTC39A-203ENST00000371747 NPM1P06748 294 aaKnown RBP eCLIP33.1■■■□□ 2.89
TTC39A-203ENST00000371747 SHANK2Q9UPX8 1470 aa33.1■■■□□ 2.89
TTC39A-203ENST00000371747 ACIN1Q9UKV3 1341 aaKnown RBP33.1■■■□□ 2.89
TTC39A-203ENST00000371747 NEUROD1Q13562 356 aa33.1■■■□□ 2.89
TTC39A-203ENST00000371747 TRIM52Q96A61 297 aa33.1■■■□□ 2.89
TTC39A-203ENST00000371747 ARHGEF5Q12774 1597 aa33.09■■■□□ 2.89
TTC39A-203ENST00000371747 MYO5CQ9NQX4 1742 aa33.08■■■□□ 2.89
TTC39A-203ENST00000371747 ASXL2Q76L83 1435 aa33.08■■■□□ 2.89
TTC39A-203ENST00000371747 MBD5Q9P267 1494 aa33.07■■■□□ 2.88
TTC39A-203ENST00000371747 ANKRD30AQ9BXX3 1397 aa33.07■■■□□ 2.88
TTC39A-203ENST00000371747 ARHGAP5Q13017 1502 aa33.06■■■□□ 2.88
TTC39A-203ENST00000371747 HNRNPMP52272 730 aaKnown RBP eCLIP33.05■■■□□ 2.88
TTC39A-203ENST00000371747 TIMELESSQ9UNS1 1208 aa33.05■■■□□ 2.88
TTC39A-203ENST00000371747 C9orf84Q5VXU9 1444 aa33.04■■■□□ 2.88
TTC39A-203ENST00000371747 DENND4BO75064 1496 aaPredicted RBP33.03■■■□□ 2.88
TTC39A-203ENST00000371747 TSPY4P0CV99 314 aa33.01■■■□□ 2.87
TTC39A-203ENST00000371747 TSPY10P0CW01 314 aa33.01■■■□□ 2.87
TTC39A-203ENST00000371747 MPHOSPH9Q99550 1183 aa32.99■■■□□ 2.87
TTC39A-203ENST00000371747 PLCH2O75038 1416 aa32.99■■■□□ 2.87
TTC39A-203ENST00000371747 CCDC141Q6ZP82 1450 aa32.99■■■□□ 2.87
TTC39A-203ENST00000371747 RSPH4AQ5TD94 716 aa32.99■■■□□ 2.87
TTC39A-203ENST00000371747 DIEXFQ68CQ4 756 aaKnown RBP32.96■■■□□ 2.87
TTC39A-203ENST00000371747 SYCP2Q9BX26 1530 aa32.95■■■□□ 2.87
TTC39A-203ENST00000371747 PLEKHH2Q8IVE3 1493 aa32.93■■■□□ 2.86
TTC39A-203ENST00000371747 KIAA1107Q9UPP5 1409 aa32.93■■■□□ 2.86
TTC39A-203ENST00000371747 ABCA9Q8IUA7 1624 aa32.91■■■□□ 2.86
TTC39A-203ENST00000371747 ANKRD50Q9ULJ7 1429 aa32.91■■■□□ 2.86
TTC39A-203ENST00000371747 EFCAB2Q5VUJ9 269 aa32.88■■■□□ 2.85
TTC39A-203ENST00000371747 TONSLQ96HA7 1378 aa32.86■■■□□ 2.85
TTC39A-203ENST00000371747 MAST1Q9Y2H9 1570 aa32.85■■■□□ 2.85
TTC39A-203ENST00000371747 KIF15Q9NS87 1388 aa32.85■■■□□ 2.85
TTC39A-203ENST00000371747 ARAP3Q8WWN8 1544 aa32.85■■■□□ 2.85
TTC39A-203ENST00000371747 PPP1R15AO75807 674 aaPredicted RBP32.84■■■□□ 2.85
TTC39A-203ENST00000371747 PZPP20742 1482 aa32.83■■■□□ 2.85
TTC39A-203ENST00000371747 ARHGEF12Q9NZN5 1544 aa32.83■■■□□ 2.85
TTC39A-203ENST00000371747 SLC4A1APQ9BWU0 796 aaKnown RBP32.82■■■□□ 2.85
TTC39A-203ENST00000371747 ABCC1P33527 1531 aa32.79■■■□□ 2.84
TTC39A-203ENST00000371747 FOXD1Q16676 465 aa32.79■■■□□ 2.84
TTC39A-203ENST00000371747 ANKRD30BQ9BXX2 1392 aa32.76■■■□□ 2.84
TTC39A-203ENST00000371747 PLXNC1O60486 1568 aa32.71■■■□□ 2.83
TTC39A-203ENST00000371747 FANCAO15360 1455 aa32.71■■■□□ 2.83
TTC39A-203ENST00000371747 KDM5DQ9BY66 1539 aa32.7■■■□□ 2.82
TTC39A-203ENST00000371747 CD109Q6YHK3 1445 aa32.68■■■□□ 2.82
TTC39A-203ENST00000371747 TRAPPC8Q9Y2L5 1435 aa32.68■■■□□ 2.82
TTC39A-203ENST00000371747 NUP155O75694 1391 aa32.67■■■□□ 2.82
TTC39A-203ENST00000371747 RPRD2Q5VT52 1461 aaKnown RBP32.64■■■□□ 2.82
TTC39A-203ENST00000371747 PKD2Q13563 968 aa32.63■■■□□ 2.81
TTC39A-203ENST00000371747 DUOX2Q9NRD8 1548 aa32.59■■■□□ 2.81
TTC39A-203ENST00000371747 GLI2P10070 1586 aa32.58■■■□□ 2.81
TTC39A-203ENST00000371747 AFAP1Q8N556 730 aa32.56■■■□□ 2.8
TTC39A-203ENST00000371747 ADGRL1O94910 1474 aa32.56■■■□□ 2.8
TTC39A-203ENST00000371747 RTEL1-TNFRSF6BF6WH68 1400 aa32.56■■■□□ 2.8
TTC39A-203ENST00000371747 MAP3K4Q9Y6R4 1608 aa32.55■■■□□ 2.8
TTC39A-203ENST00000371747 SCAPERQ9BY12 1400 aa32.55■■■□□ 2.8
TTC39A-203ENST00000371747 SPAG9O60271 1321 aaKnown RBP32.55■■■□□ 2.8
TTC39A-203ENST00000371747 UNC13BO14795 1591 aa32.54■■■□□ 2.8
TTC39A-203ENST00000371747 L3MBTL2Q969R5 705 aa32.53■■■□□ 2.8
TTC39A-203ENST00000371747 ERBINQ96RT1 1412 aa32.53■■■□□ 2.8
TTC39A-203ENST00000371747 DIP2BQ9P265 1576 aa32.52■■■□□ 2.8
TTC39A-203ENST00000371747 ZFYVE16Q7Z3T8 1539 aa32.51■■■□□ 2.8
TTC39A-203ENST00000371747 FAM69CQ0P6D2 419 aa32.51■■■□□ 2.79
TTC39A-203ENST00000371747 FAM135AQ9P2D6 1515 aa32.51■■■□□ 2.79
TTC39A-203ENST00000371747 TEX14Q8IWB6 1497 aa32.49■■■□□ 2.79
TTC39A-203ENST00000371747 CFAP74Q9C0B2 1584 aa32.48■■■□□ 2.79
TTC39A-203ENST00000371747 INO80Q9ULG1 1556 aaPredicted RBP32.45■■■□□ 2.78
TTC39A-203ENST00000371747 ATP7AQ04656 1500 aa32.43■■■□□ 2.78
TTC39A-203ENST00000371747 MAGI2Q86UL8 1455 aa32.42■■■□□ 2.78
TTC39A-203ENST00000371747 NEO1Q92859 1461 aa32.42■■■□□ 2.78
TTC39A-203ENST00000371747 IQGAP3Q86VI3 1631 aa32.41■■■□□ 2.78
TTC39A-203ENST00000371747 MIER1Q8N108 512 aa32.4■■■□□ 2.78
TTC39A-203ENST00000371747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.4■■■□□ 2.78
TTC39A-203ENST00000371747 KIF13AQ9H1H9 1805 aa32.35■■■□□ 2.77
TTC39A-203ENST00000371747 ZNF518AQ6AHZ1 1483 aa32.35■■■□□ 2.77
TTC39A-203ENST00000371747 HIRIP3Q9BW71 556 aaPredicted RBP32.34■■■□□ 2.77
TTC39A-203ENST00000371747 TSPOAP1O95153 1857 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms