RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ZBTB7CA1YPR0 619 aa21.83■■□□□ 1.09
PTP4A1-201ENST00000370651 GZF1Q9H116 711 aaPredicted RBP21.81■■□□□ 1.08
PTP4A1-201ENST00000370651 MORC1Q86VD1 984 aa21.81■■□□□ 1.08
PTP4A1-201ENST00000370651 POGKQ9P215 609 aa21.81■■□□□ 1.08
PTP4A1-201ENST00000370651 GBP4Q96PP9 640 aa21.8■■□□□ 1.08
PTP4A1-201ENST00000370651 CDK11BP21127 795 aaKnown RBP21.8■■□□□ 1.08
PTP4A1-201ENST00000370651 L3MBTL2Q969R5 705 aa21.8■■□□□ 1.08
PTP4A1-201ENST00000370651 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
PTP4A1-201ENST00000370651 CHAF1AQ13111 956 aaPredicted RBP21.79■■□□□ 1.08
PTP4A1-201ENST00000370651 ARID4BQ4LE39 1312 aaPredicted RBP21.78■■□□□ 1.08
PTP4A1-201ENST00000370651 USP35Q9P2H5 1018 aa21.78■■□□□ 1.08
PTP4A1-201ENST00000370651 PDE3BQ13370 1112 aa21.78■■□□□ 1.08
PTP4A1-201ENST00000370651 RWDD1Q9H446 243 aaPredicted RBP21.78■■□□□ 1.08
PTP4A1-201ENST00000370651 CFAP44Q96MT7 982 aa21.77■■□□□ 1.08
PTP4A1-201ENST00000370651 FANCIQ9NVI1 1328 aa21.77■■□□□ 1.08
PTP4A1-201ENST00000370651 PTMSP20962 102 aa21.76■■□□□ 1.07
PTP4A1-201ENST00000370651 GOLGA6L6A8MZA4 724 aa21.75■■□□□ 1.07
PTP4A1-201ENST00000370651 ROCK2O75116 1388 aaKnown RBP21.74■■□□□ 1.07
PTP4A1-201ENST00000370651 GOLGA6L3A6NEY3 463 aa21.74■■□□□ 1.07
PTP4A1-201ENST00000370651 PLEKHG5O94827 1062 aa21.74■■□□□ 1.07
PTP4A1-201ENST00000370651 NLRP13Q86W25 1043 aa21.74■■□□□ 1.07
PTP4A1-201ENST00000370651 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
PTP4A1-201ENST00000370651 GOLGA6L4A6NEF3 574 aa21.73■■□□□ 1.07
PTP4A1-201ENST00000370651 IPO8O15397 1037 aaKnown RBP21.72■■□□□ 1.07
PTP4A1-201ENST00000370651 NRDCO43847 1150 aa21.72■■□□□ 1.07
PTP4A1-201ENST00000370651 MCCP23508 829 aa21.72■■□□□ 1.07
PTP4A1-201ENST00000370651 KCNJ4P48050 445 aa21.72■■□□□ 1.07
PTP4A1-201ENST00000370651 OS9Q13438 667 aaPredicted RBP21.71■■□□□ 1.07
PTP4A1-201ENST00000370651 GOLGA2Q08379 1002 aa21.7■■□□□ 1.06
PTP4A1-201ENST00000370651 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
PTP4A1-201ENST00000370651 FGD1P98174 961 aa21.7■■□□□ 1.06
PTP4A1-201ENST00000370651 PDE4AP27815 886 aa21.68■■□□□ 1.06
PTP4A1-201ENST00000370651 ZBED9Q6R2W3 1325 aa21.67■■□□□ 1.06
PTP4A1-201ENST00000370651 PRKRIP1Q9H875 184 aaPredicted RBP21.67■■□□□ 1.06
PTP4A1-201ENST00000370651 NUP155O75694 1391 aa21.67■■□□□ 1.06
PTP4A1-201ENST00000370651 ITPRIPQ8IWB1 547 aa21.66■■□□□ 1.06
PTP4A1-201ENST00000370651 HAP1P54257 671 aaPredicted RBP21.65■■□□□ 1.06
PTP4A1-201ENST00000370651 MFAP1P55081 439 aaKnown RBP21.65■■□□□ 1.06
PTP4A1-201ENST00000370651 KANK1Q14678 1352 aa21.65■■□□□ 1.06
PTP4A1-201ENST00000370651 RAPGEF2Q9Y4G8 1499 aa21.64■■□□□ 1.06
PTP4A1-201ENST00000370651 SRPK2P78362 688 aaKnown RBP21.64■■□□□ 1.05
PTP4A1-201ENST00000370651 U2AF1L5P0DN76 240 aaPredicted RBP21.63■■□□□ 1.05
PTP4A1-201ENST00000370651 U2AF1Q01081 240 aaKnown RBP eCLIP21.63■■□□□ 1.052e-20■■■■■ 72.7
PTP4A1-201ENST00000370651 KIAA2012Q0VF49 1180 aa21.62■■□□□ 1.05
PTP4A1-201ENST00000370651 GSE1Q14687 1217 aa21.61■■□□□ 1.05
PTP4A1-201ENST00000370651 DRC7Q8IY82 874 aa21.61■■□□□ 1.05
PTP4A1-201ENST00000370651 A0A0G2JS52 829 aa21.6■■□□□ 1.05
PTP4A1-201ENST00000370651 ANKRD30AQ9BXX3 1397 aa21.6■■□□□ 1.05
PTP4A1-201ENST00000370651 KIF15Q9NS87 1388 aa21.6■■□□□ 1.05
PTP4A1-201ENST00000370651 PHLDB1Q86UU1 1377 aa21.6■■□□□ 1.05
PTP4A1-201ENST00000370651 APBB1O00213 710 aa21.59■■□□□ 1.05
PTP4A1-201ENST00000370651 MYBBP1AQ9BQG0 1328 aaKnown RBP21.59■■□□□ 1.05
PTP4A1-201ENST00000370651 EXOC6Q8TAG9 804 aa21.58■■□□□ 1.05
PTP4A1-201ENST00000370651 CENPQQ7L2Z9 268 aaPredicted RBP21.58■■□□□ 1.05
PTP4A1-201ENST00000370651 CENPJQ9HC77 1338 aaPredicted RBP21.58■■□□□ 1.04
PTP4A1-201ENST00000370651 RRP1P56182 461 aaKnown RBP21.58■■□□□ 1.04
PTP4A1-201ENST00000370651 FAM161AQ3B820 660 aa21.58■■□□□ 1.04
PTP4A1-201ENST00000370651 NAP1L2Q9ULW6 460 aaPredicted RBP21.58■■□□□ 1.04
PTP4A1-201ENST00000370651 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
PTP4A1-201ENST00000370651 WIZO95785 1651 aa21.57■■□□□ 1.04
PTP4A1-201ENST00000370651 CLUAP1Q96AJ1 413 aa21.56■■□□□ 1.04
PTP4A1-201ENST00000370651 TAOK2Q9UL54 1235 aa21.56■■□□□ 1.04
PTP4A1-201ENST00000370651 SAFB2Q14151 953 aaKnown RBP eCLIP21.56■■□□□ 1.04
PTP4A1-201ENST00000370651 SLC4A3P48751 1232 aa21.56■■□□□ 1.04
PTP4A1-201ENST00000370651 RSPH6AQ9H0K4 717 aa21.55■■□□□ 1.04
PTP4A1-201ENST00000370651 SYAP1Q96A49 352 aaPredicted RBP21.55■■□□□ 1.04
PTP4A1-201ENST00000370651 SMC4Q9NTJ3 1288 aa21.55■■□□□ 1.04
PTP4A1-201ENST00000370651 CCDC146Q8IYE0 955 aa21.55■■□□□ 1.04
PTP4A1-201ENST00000370651 ARID3AQ99856 593 aa21.54■■□□□ 1.04
PTP4A1-201ENST00000370651 FHOD3Q2V2M9 1422 aa21.54■■□□□ 1.04
PTP4A1-201ENST00000370651 CALD1Q05682 793 aaKnown RBP21.54■■□□□ 1.04
PTP4A1-201ENST00000370651 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.04
PTP4A1-201ENST00000370651 PLIN1O60240 522 aa21.52■■□□□ 1.03
PTP4A1-201ENST00000370651 KIAA1211Q6ZU35 1233 aa21.51■■□□□ 1.03
PTP4A1-201ENST00000370651 ST20-MTHFSA0A0A6YYL1 179 aa21.5■■□□□ 1.03
PTP4A1-201ENST00000370651 HDGFL2Q7Z4V5 671 aaPredicted RBP21.49■■□□□ 1.03
PTP4A1-201ENST00000370651 DDX11L8A8MPP1 907 aa21.49■■□□□ 1.03
PTP4A1-201ENST00000370651 CRBNQ96SW2 442 aa21.48■■□□□ 1.03
PTP4A1-201ENST00000370651 HSP90AA2PQ14568 343 aaPredicted RBP21.48■■□□□ 1.03
PTP4A1-201ENST00000370651 EIF3AQ14152 1382 aaKnown RBP21.47■■□□□ 1.03
PTP4A1-201ENST00000370651 RTF1Q92541 710 aaKnown RBP21.47■■□□□ 1.03
PTP4A1-201ENST00000370651 FOXD4L1Q9NU39 408 aa21.46■■□□□ 1.03
PTP4A1-201ENST00000370651 SMARCA2P51531 1590 aa21.45■■□□□ 1.02
PTP4A1-201ENST00000370651 SOX12O15370 315 aa21.45■■□□□ 1.02
PTP4A1-201ENST00000370651 STK26Q9P289 416 aa21.44■■□□□ 1.02
PTP4A1-201ENST00000370651 CCDC18Q5T9S5 1454 aa21.42■■□□□ 1.02
PTP4A1-201ENST00000370651 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
PTP4A1-201ENST00000370651 LMOD2Q6P5Q4 547 aa21.42■■□□□ 1.02
PTP4A1-201ENST00000370651 PANK3Q9H999 370 aa21.42■■□□□ 1.02
PTP4A1-201ENST00000370651 USP47Q96K76 1375 aa21.4■■□□□ 1.02
PTP4A1-201ENST00000370651 CGNL1Q0VF96 1302 aa21.4■■□□□ 1.02
PTP4A1-201ENST00000370651 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
PTP4A1-201ENST00000370651 HTATSF1O43719 755 aaKnown RBP21.38■■□□□ 1.01
PTP4A1-201ENST00000370651 AMER1Q5JTC6 1135 aaPredicted RBP21.38■■□□□ 1.01
PTP4A1-201ENST00000370651 GGT6Q6P531 493 aa21.38■■□□□ 1.01
PTP4A1-201ENST00000370651 HMMRO75330 724 aa21.37■■□□□ 1.01
PTP4A1-201ENST00000370651 E9PSI1 815 aa21.37■■□□□ 1.01
PTP4A1-201ENST00000370651 ST18O60284 1047 aa21.37■■□□□ 1.01
PTP4A1-201ENST00000370651 SKOR2Q2VWA4 1001 aaPredicted RBP21.36■■□□□ 1.01
PTP4A1-201ENST00000370651 DDX49Q9Y6V7 483 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms