RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 HDGFL2Q7Z4V5 671 aaPredicted RBP22.93■■□□□ 1.26
SNX27-203ENST00000368843 CUX2O14529 1486 aa22.93■■□□□ 1.26
SNX27-203ENST00000368843 FHAD1B1AJZ9 1412 aa22.93■■□□□ 1.26
SNX27-203ENST00000368843 GOLGA6L4A6NEF3 574 aa22.92■■□□□ 1.26
SNX27-203ENST00000368843 ARID3AQ99856 593 aa22.91■■□□□ 1.26
SNX27-203ENST00000368843 APBB1O00213 710 aa22.91■■□□□ 1.26
SNX27-203ENST00000368843 MCCP23508 829 aa22.89■■□□□ 1.26
SNX27-203ENST00000368843 B4GALNT3Q6L9W6 998 aa22.89■■□□□ 1.26
SNX27-203ENST00000368843 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
SNX27-203ENST00000368843 PPP4R2Q9NY27 417 aa22.88■■□□□ 1.25
SNX27-203ENST00000368843 GNL2Q13823 731 aaKnown RBP22.88■■□□□ 1.25
SNX27-203ENST00000368843 HSCBQ8IWL3 235 aa22.87■■□□□ 1.25
SNX27-203ENST00000368843 TMX4Q9H1E5 349 aaPredicted RBP22.85■■□□□ 1.25
SNX27-203ENST00000368843 ERICH6BQ5W0A0 696 aa22.84■■□□□ 1.25
SNX27-203ENST00000368843 FOXD1Q16676 465 aa22.83■■□□□ 1.25
SNX27-203ENST00000368843 NRDCO43847 1150 aa22.81■■□□□ 1.24
SNX27-203ENST00000368843 ARHGAP35Q9NRY4 1499 aa22.8■■□□□ 1.24
SNX27-203ENST00000368843 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
SNX27-203ENST00000368843 PKD2Q13563 968 aa22.8■■□□□ 1.24
SNX27-203ENST00000368843 CARMIL2Q6F5E8 1435 aa22.79■■□□□ 1.24
SNX27-203ENST00000368843 CHMP3Q9Y3E7 222 aa22.78■■□□□ 1.24
SNX27-203ENST00000368843 NOP58Q9Y2X3 529 aaKnown RBP22.77■■□□□ 1.24
SNX27-203ENST00000368843 DRC7Q8IY82 874 aa22.77■■□□□ 1.24
SNX27-203ENST00000368843 ROCK2O75116 1388 aaKnown RBP22.77■■□□□ 1.24
SNX27-203ENST00000368843 KIAA1211Q6ZU35 1233 aa22.76■■□□□ 1.23
SNX27-203ENST00000368843 ANO8Q9HCE9 1232 aaPredicted RBP22.75■■□□□ 1.23
SNX27-203ENST00000368843 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
SNX27-203ENST00000368843 U2AF1L5P0DN76 240 aaPredicted RBP22.75■■□□□ 1.23
SNX27-203ENST00000368843 U2AF1Q01081 240 aaKnown RBP eCLIP22.75■■□□□ 1.231e-6■■■■□ 25.4
SNX27-203ENST00000368843 NUTM2DQ5VT03 806 aaPredicted RBP22.74■■□□□ 1.23
SNX27-203ENST00000368843 PDE4CQ08493 712 aa22.73■■□□□ 1.23
SNX27-203ENST00000368843 HSPA5P11021 654 aaKnown RBP22.73■■□□□ 1.23
SNX27-203ENST00000368843 G3V3G9 751 aa22.72■■□□□ 1.23
SNX27-203ENST00000368843 DCAF8Q5TAQ9 597 aa22.72■■□□□ 1.23
SNX27-203ENST00000368843 TAF7LQ5H9L4 462 aa22.72■■□□□ 1.23
SNX27-203ENST00000368843 ITPRIPQ8IWB1 547 aa22.71■■□□□ 1.23
SNX27-203ENST00000368843 IPO8O15397 1037 aaKnown RBP22.71■■□□□ 1.23
SNX27-203ENST00000368843 GORABQ5T7V8 394 aa22.71■■□□□ 1.23
SNX27-203ENST00000368843 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
SNX27-203ENST00000368843 CALD1Q05682 793 aaKnown RBP22.69■■□□□ 1.22
SNX27-203ENST00000368843 SPAG9O60271 1321 aaKnown RBP22.68■■□□□ 1.22
SNX27-203ENST00000368843 SETD5Q9C0A6 1442 aa22.68■■□□□ 1.22
SNX27-203ENST00000368843 CFAP44Q96MT7 982 aa22.66■■□□□ 1.22
SNX27-203ENST00000368843 GZF1Q9H116 711 aaPredicted RBP22.65■■□□□ 1.22
SNX27-203ENST00000368843 EFCAB2Q5VUJ9 269 aa22.65■■□□□ 1.22
SNX27-203ENST00000368843 NGDNQ8NEJ9 315 aaKnown RBP22.65■■□□□ 1.22
SNX27-203ENST00000368843 KIF3BO15066 747 aa22.64■■□□□ 1.22
SNX27-203ENST00000368843 SOGA1O94964 1423 aa22.64■■□□□ 1.22
SNX27-203ENST00000368843 CHAF1AQ13111 956 aaPredicted RBP22.64■■□□□ 1.21
SNX27-203ENST00000368843 NUP155O75694 1391 aa22.64■■□□□ 1.21
SNX27-203ENST00000368843 LTV1Q96GA3 475 aaPredicted RBP22.63■■□□□ 1.21
SNX27-203ENST00000368843 NUTM2FA1L443 756 aa22.63■■□□□ 1.21
SNX27-203ENST00000368843 STK31Q9BXU1 1019 aa22.63■■□□□ 1.21
SNX27-203ENST00000368843 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
SNX27-203ENST00000368843 KIAA2012Q0VF49 1180 aa22.61■■□□□ 1.21
SNX27-203ENST00000368843 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
SNX27-203ENST00000368843 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
SNX27-203ENST00000368843 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.21
SNX27-203ENST00000368843 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.6■■□□□ 1.21
SNX27-203ENST00000368843 GPATCH3Q96I76 525 aa22.6■■□□□ 1.21
SNX27-203ENST00000368843 HSP90B1P14625 803 aaKnown RBP22.59■■□□□ 1.21
SNX27-203ENST00000368843 AMPHP49418 695 aa22.59■■□□□ 1.21
SNX27-203ENST00000368843 MSNP26038 577 aaKnown RBP22.58■■□□□ 1.21
SNX27-203ENST00000368843 SLC4A10Q6U841 1118 aa22.58■■□□□ 1.21
SNX27-203ENST00000368843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.58■■□□□ 1.27e-6■■□□□ 11.5
SNX27-203ENST00000368843 TRIM6-TRIM34B2RNG4 842 aa22.58■■□□□ 1.2
SNX27-203ENST00000368843 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
SNX27-203ENST00000368843 ANKRD30AQ9BXX3 1397 aa22.57■■□□□ 1.2
SNX27-203ENST00000368843 ABCC8Q09428 1581 aa22.57■■□□□ 1.2
SNX27-203ENST00000368843 MPHOSPH9Q99550 1183 aa22.57■■□□□ 1.2
SNX27-203ENST00000368843 TERF2IPQ9NYB0 399 aa22.56■■□□□ 1.2
SNX27-203ENST00000368843 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
SNX27-203ENST00000368843 FOXD4L1Q9NU39 408 aa22.54■■□□□ 1.2
SNX27-203ENST00000368843 DEKP35659 375 aaKnown RBP22.54■■□□□ 1.2
SNX27-203ENST00000368843 L1TD1Q5T7N2 865 aaKnown RBP22.54■■□□□ 1.2
SNX27-203ENST00000368843 GTF2E1P29083 439 aaPredicted RBP22.54■■□□□ 1.2
SNX27-203ENST00000368843 CCDC146Q8IYE0 955 aa22.53■■□□□ 1.2
SNX27-203ENST00000368843 FRAT2O75474 233 aaPredicted RBP22.53■■□□□ 1.2
SNX27-203ENST00000368843 RWDD1Q9H446 243 aaPredicted RBP22.53■■□□□ 1.2
SNX27-203ENST00000368843 PRM3Q9NNZ6 103 aa22.53■■□□□ 1.2
SNX27-203ENST00000368843 SMC4Q9NTJ3 1288 aa22.53■■□□□ 1.2
SNX27-203ENST00000368843 NOL8Q76FK4 1167 aaKnown RBP22.53■■□□□ 1.2
SNX27-203ENST00000368843 RCAN3Q9UKA8 241 aa22.5■■□□□ 1.19
SNX27-203ENST00000368843 NOC3LQ8WTT2 800 aaKnown RBP22.5■■□□□ 1.19
SNX27-203ENST00000368843 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
SNX27-203ENST00000368843 RALBP1Q15311 655 aa22.49■■□□□ 1.19
SNX27-203ENST00000368843 CHMP4AQ9BY43 222 aa22.49■■□□□ 1.19
SNX27-203ENST00000368843 SLKQ9H2G2 1235 aaPredicted RBP22.49■■□□□ 1.19
SNX27-203ENST00000368843 CREBRFQ8IUR6 639 aa22.48■■□□□ 1.19
SNX27-203ENST00000368843 VPS53Q5VIR6 699 aa22.48■■□□□ 1.19
SNX27-203ENST00000368843 RASSF8Q8NHQ8 419 aa22.48■■□□□ 1.19
SNX27-203ENST00000368843 EVA1CP58658 441 aa22.47■■□□□ 1.19
SNX27-203ENST00000368843 TOMM22Q9NS69 142 aa22.47■■□□□ 1.19
SNX27-203ENST00000368843 HTATSF1O43719 755 aaKnown RBP22.47■■□□□ 1.19
SNX27-203ENST00000368843 FMN1Q68DA7 1419 aa22.47■■□□□ 1.19
SNX27-203ENST00000368843 CCER2I3L3R5 266 aa22.46■■□□□ 1.19
SNX27-203ENST00000368843 MSH5O43196 834 aa22.46■■□□□ 1.19
SNX27-203ENST00000368843 MFAP1P55081 439 aaKnown RBP22.45■■□□□ 1.19
SNX27-203ENST00000368843 TIMELESSQ9UNS1 1208 aa22.45■■□□□ 1.19
SNX27-203ENST00000368843 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms