RNA–Protein interactions for RNA: ENST00000366522.6

EFCAB2-202, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2 BASIC

Gene EFCAB2, Length 6,167 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-202ENST00000366522 GBP4Q96PP9 640 aa18.64■□□□□ 0.57
EFCAB2-202ENST00000366522 SLKQ9H2G2 1235 aaPredicted RBP18.63■□□□□ 0.57
EFCAB2-202ENST00000366522 ERCC6Q03468 1493 aa18.63■□□□□ 0.57
EFCAB2-202ENST00000366522 GOLGA6L3A6NEY3 463 aa18.62■□□□□ 0.57
EFCAB2-202ENST00000366522 KANK1Q14678 1352 aa18.62■□□□□ 0.57
EFCAB2-202ENST00000366522 SOX12O15370 315 aa18.61■□□□□ 0.57
EFCAB2-202ENST00000366522 APBB1O00213 710 aa18.6■□□□□ 0.57
EFCAB2-202ENST00000366522 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
EFCAB2-202ENST00000366522 CEP162Q5TB80 1403 aa18.6■□□□□ 0.57
EFCAB2-202ENST00000366522 A0A0U1RQG5 324 aaPredicted RBP18.6■□□□□ 0.57
EFCAB2-202ENST00000366522 TSHZ2Q9NRE2 1034 aa18.6■□□□□ 0.57
EFCAB2-202ENST00000366522 GNL2Q13823 731 aaKnown RBP18.59■□□□□ 0.57
EFCAB2-202ENST00000366522 ZCCHC6Q5VYS8 1495 aaKnown RBP18.59■□□□□ 0.57
EFCAB2-202ENST00000366522 MCCP23508 829 aa18.59■□□□□ 0.57
EFCAB2-202ENST00000366522 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.57
EFCAB2-202ENST00000366522 SYAP1Q96A49 352 aaPredicted RBP18.57■□□□□ 0.56
EFCAB2-202ENST00000366522 PRM3Q9NNZ6 103 aa18.57■□□□□ 0.56
EFCAB2-202ENST00000366522 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
EFCAB2-202ENST00000366522 CSB-PGBD3P0DP91 1061 aa18.55■□□□□ 0.56
EFCAB2-202ENST00000366522 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
EFCAB2-202ENST00000366522 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
EFCAB2-202ENST00000366522 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
EFCAB2-202ENST00000366522 ZNF771Q7L3S4 317 aaPredicted RBP18.52■□□□□ 0.56
EFCAB2-202ENST00000366522 TPM4P67936 248 aa18.52■□□□□ 0.56
EFCAB2-202ENST00000366522 APPP05067 770 aa18.51■□□□□ 0.55
EFCAB2-202ENST00000366522 ZNF330Q9Y3S2 320 aaPredicted RBP18.51■□□□□ 0.55
EFCAB2-202ENST00000366522 G3V3G9 751 aa18.5■□□□□ 0.55
EFCAB2-202ENST00000366522 DCAF8Q5TAQ9 597 aa18.5■□□□□ 0.55
EFCAB2-202ENST00000366522 PAK3O75914 559 aaPredicted RBP18.49■□□□□ 0.55
EFCAB2-202ENST00000366522 TMF1P82094 1093 aa18.49■□□□□ 0.55
EFCAB2-202ENST00000366522 HTATSF1O43719 755 aaKnown RBP18.45■□□□□ 0.54
EFCAB2-202ENST00000366522 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
EFCAB2-202ENST00000366522 HDGFL2Q7Z4V5 671 aaPredicted RBP18.45■□□□□ 0.54
EFCAB2-202ENST00000366522 KIAA1211Q6ZU35 1233 aa18.43■□□□□ 0.54
EFCAB2-202ENST00000366522 SAFB2Q14151 953 aaKnown RBP eCLIP18.43■□□□□ 0.54
EFCAB2-202ENST00000366522 GPS2Q13227 327 aa18.43■□□□□ 0.54
EFCAB2-202ENST00000366522 SLC4A3P48751 1232 aa18.42■□□□□ 0.54
EFCAB2-202ENST00000366522 PKNOX2Q96KN3 472 aa18.42■□□□□ 0.54
EFCAB2-202ENST00000366522 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
EFCAB2-202ENST00000366522 NOL8Q76FK4 1167 aaKnown RBP18.41■□□□□ 0.54
EFCAB2-202ENST00000366522 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
EFCAB2-202ENST00000366522 FOXD1Q16676 465 aa18.41■□□□□ 0.54
EFCAB2-202ENST00000366522 FOXD4L5Q5VV16 416 aaPredicted RBP18.4■□□□□ 0.54
EFCAB2-202ENST00000366522 FOXD4L4Q8WXT5 416 aaPredicted RBP18.4■□□□□ 0.54
EFCAB2-202ENST00000366522 NOM1Q5C9Z4 860 aaKnown RBP18.4■□□□□ 0.54
EFCAB2-202ENST00000366522 IPO9Q96P70 1041 aaKnown RBP18.4■□□□□ 0.54
EFCAB2-202ENST00000366522 GORABQ5T7V8 394 aa18.39■□□□□ 0.53
EFCAB2-202ENST00000366522 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
EFCAB2-202ENST00000366522 TEX35Q5T0J7 233 aa18.39■□□□□ 0.53
EFCAB2-202ENST00000366522 PODXL2Q9NZ53 605 aa18.39■□□□□ 0.53
EFCAB2-202ENST00000366522 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.53
EFCAB2-202ENST00000366522 TAF7LQ5H9L4 462 aa18.39■□□□□ 0.53
EFCAB2-202ENST00000366522 STK26Q9P289 416 aa18.39■□□□□ 0.53
EFCAB2-202ENST00000366522 DCAF11Q8TEB1 546 aa18.38■□□□□ 0.53
EFCAB2-202ENST00000366522 PDE4CQ08493 712 aa18.38■□□□□ 0.53
EFCAB2-202ENST00000366522 CSPP1Q1MSJ5 1256 aa18.37■□□□□ 0.53
EFCAB2-202ENST00000366522 PHF14O94880 888 aa18.37■□□□□ 0.53
EFCAB2-202ENST00000366522 CHMP4AQ9BY43 222 aa18.36■□□□□ 0.53
EFCAB2-202ENST00000366522 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
EFCAB2-202ENST00000366522 CALD1Q05682 793 aaKnown RBP18.36■□□□□ 0.53
EFCAB2-202ENST00000366522 GGT6Q6P531 493 aa18.36■□□□□ 0.53
EFCAB2-202ENST00000366522 CHMP3Q9Y3E7 222 aa18.34■□□□□ 0.53
EFCAB2-202ENST00000366522 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
EFCAB2-202ENST00000366522 IPO8O15397 1037 aaKnown RBP18.34■□□□□ 0.53
EFCAB2-202ENST00000366522 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
EFCAB2-202ENST00000366522 RCAN3Q9UKA8 241 aa18.32■□□□□ 0.52
EFCAB2-202ENST00000366522 ANO8Q9HCE9 1232 aaPredicted RBP18.32■□□□□ 0.52
EFCAB2-202ENST00000366522 KRI1Q8N9T8 703 aaKnown RBP18.32■□□□□ 0.52
EFCAB2-202ENST00000366522 TPM3P06753 285 aa18.31■□□□□ 0.52
EFCAB2-202ENST00000366522 GPATCH3Q96I76 525 aa18.31■□□□□ 0.52
EFCAB2-202ENST00000366522 EEA1Q15075 1411 aa18.31■□□□□ 0.52
EFCAB2-202ENST00000366522 PRKCSHP14314 528 aaPredicted RBP18.3■□□□□ 0.52
EFCAB2-202ENST00000366522 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
EFCAB2-202ENST00000366522 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
EFCAB2-202ENST00000366522 DDX11L8A8MPP1 907 aa18.3■□□□□ 0.52
EFCAB2-202ENST00000366522 CCDC34Q96HJ3 373 aa18.3■□□□□ 0.52
EFCAB2-202ENST00000366522 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
EFCAB2-202ENST00000366522 SPAG9O60271 1321 aaKnown RBP18.29■□□□□ 0.52
EFCAB2-202ENST00000366522 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
EFCAB2-202ENST00000366522 RASSF8Q8NHQ8 419 aa18.28■□□□□ 0.52
EFCAB2-202ENST00000366522 HDAC5Q9UQL6 1122 aa18.27■□□□□ 0.52
EFCAB2-202ENST00000366522 GTF2E1P29083 439 aaPredicted RBP18.27■□□□□ 0.52
EFCAB2-202ENST00000366522 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
EFCAB2-202ENST00000366522 VPS53Q5VIR6 699 aa18.27■□□□□ 0.51
EFCAB2-202ENST00000366522 FOXD4L6Q3SYB3 417 aaPredicted RBP18.27■□□□□ 0.51
EFCAB2-202ENST00000366522 FOXD4L3Q6VB84 417 aaPredicted RBP18.27■□□□□ 0.51
EFCAB2-202ENST00000366522 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
EFCAB2-202ENST00000366522 GSE1Q14687 1217 aa18.26■□□□□ 0.51
EFCAB2-202ENST00000366522 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
EFCAB2-202ENST00000366522 EID1Q9Y6B2 187 aa18.26■□□□□ 0.51
EFCAB2-202ENST00000366522 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
EFCAB2-202ENST00000366522 CCER2I3L3R5 266 aa18.26■□□□□ 0.51
EFCAB2-202ENST00000366522 FRAT2O75474 233 aaPredicted RBP18.26■□□□□ 0.51
EFCAB2-202ENST00000366522 RRP12Q5JTH9 1297 aaKnown RBP18.25■□□□□ 0.51
EFCAB2-202ENST00000366522 CCDC70Q6NSX1 233 aa18.25■□□□□ 0.51
EFCAB2-202ENST00000366522 CREBRFQ8IUR6 639 aa18.25■□□□□ 0.51
EFCAB2-202ENST00000366522 CEP89Q96ST8 783 aa18.25■□□□□ 0.51
EFCAB2-202ENST00000366522 MARCH6O60337 910 aa18.24■□□□□ 0.51
EFCAB2-202ENST00000366522 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.24■□□□□ 0.51
EFCAB2-202ENST00000366522 MTERF4Q7Z6M4 381 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms