RNA–Protein interactions for RNA: ENST00000360906.9

NLRC4-202, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC4, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-202ENST00000360906 MYOM3Q5VTT5 1437 aa9.67□□□□□ -0.86
NLRC4-202ENST00000360906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.67□□□□□ -0.86
NLRC4-202ENST00000360906 FGD6Q6ZV73 1430 aa9.67□□□□□ -0.86
NLRC4-202ENST00000360906 TTC37Q6PGP7 1564 aa9.66□□□□□ -0.86
NLRC4-202ENST00000360906 EHBP1L1Q8N3D4 1523 aa9.66□□□□□ -0.86
NLRC4-202ENST00000360906 ARID4BQ4LE39 1312 aaPredicted RBP9.66□□□□□ -0.86
NLRC4-202ENST00000360906 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
NLRC4-202ENST00000360906 FANCAO15360 1455 aa9.64□□□□□ -0.87
NLRC4-202ENST00000360906 SUPT6HQ7KZ85 1726 aaKnown RBP9.64□□□□□ -0.87
NLRC4-202ENST00000360906 GGT6Q6P531 493 aa9.64□□□□□ -0.87
NLRC4-202ENST00000360906 SENP3Q9H4L4 574 aaPredicted RBP9.64□□□□□ -0.87
NLRC4-202ENST00000360906 CFAP43Q8NDM7 1665 aa9.64□□□□□ -0.87
NLRC4-202ENST00000360906 SPAG9O60271 1321 aaKnown RBP9.63□□□□□ -0.87
NLRC4-202ENST00000360906 ABCC10Q5T3U5 1492 aa9.63□□□□□ -0.87
NLRC4-202ENST00000360906 PLCH2O75038 1416 aa9.63□□□□□ -0.87
NLRC4-202ENST00000360906 PTPRKQ15262 1439 aa9.62□□□□□ -0.87
NLRC4-202ENST00000360906 TRAPPC8Q9Y2L5 1435 aa9.62□□□□□ -0.87
NLRC4-202ENST00000360906 FOXD1Q16676 465 aa9.62□□□□□ -0.87
NLRC4-202ENST00000360906 AKNAQ7Z591 1439 aa9.61□□□□□ -0.87
NLRC4-202ENST00000360906 CCER1Q8TC90 406 aaPredicted RBP9.61□□□□□ -0.87
NLRC4-202ENST00000360906 MAP3K1Q13233 1512 aa9.6□□□□□ -0.87
NLRC4-202ENST00000360906 ADGRL1O94910 1474 aa9.6□□□□□ -0.87
NLRC4-202ENST00000360906 KIF3BO15066 747 aa9.6□□□□□ -0.87
NLRC4-202ENST00000360906 CAMSAP2Q08AD1 1489 aa9.6□□□□□ -0.87
NLRC4-202ENST00000360906 ARHGEF12Q9NZN5 1544 aa9.59□□□□□ -0.87
NLRC4-202ENST00000360906 COL17A1Q9UMD9 1497 aaPredicted RBP9.59□□□□□ -0.87
NLRC4-202ENST00000360906 SYCP2Q9BX26 1530 aa9.59□□□□□ -0.87
NLRC4-202ENST00000360906 MAPKBP1O60336 1514 aa9.58□□□□□ -0.88
NLRC4-202ENST00000360906 DIP2BQ9P265 1576 aa9.58□□□□□ -0.88
NLRC4-202ENST00000360906 ABCC5O15440 1437 aa9.57□□□□□ -0.88
NLRC4-202ENST00000360906 PTPN23Q9H3S7 1636 aa9.57□□□□□ -0.88
NLRC4-202ENST00000360906 CDC42BPAQ5VT25 1732 aa9.56□□□□□ -0.88
NLRC4-202ENST00000360906 RRBP1Q9P2E9 1410 aaKnown RBP9.56□□□□□ -0.88
NLRC4-202ENST00000360906 NEUROD1Q13562 356 aa9.56□□□□□ -0.88
NLRC4-202ENST00000360906 CDC42BPBQ9Y5S2 1711 aa9.56□□□□□ -0.88
NLRC4-202ENST00000360906 DAPK1P53355 1430 aa9.55□□□□□ -0.88
NLRC4-202ENST00000360906 MIA2Q96PC5 1412 aa9.55□□□□□ -0.88
NLRC4-202ENST00000360906 YEATS2Q9ULM3 1422 aa9.54□□□□□ -0.88
NLRC4-202ENST00000360906 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
NLRC4-202ENST00000360906 C9orf84Q5VXU9 1444 aa9.54□□□□□ -0.88
NLRC4-202ENST00000360906 MYO5CQ9NQX4 1742 aa9.53□□□□□ -0.88
NLRC4-202ENST00000360906 DENND4BO75064 1496 aaPredicted RBP9.53□□□□□ -0.88
NLRC4-202ENST00000360906 RAB3GAP2Q9H2M9 1393 aa9.53□□□□□ -0.88
NLRC4-202ENST00000360906 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
NLRC4-202ENST00000360906 KIF13AQ9H1H9 1805 aa9.53□□□□□ -0.88
NLRC4-202ENST00000360906 SLC4A1APQ9BWU0 796 aaKnown RBP9.52□□□□□ -0.88
NLRC4-202ENST00000360906 ABCA9Q8IUA7 1624 aa9.52□□□□□ -0.88
NLRC4-202ENST00000360906 MBD5Q9P267 1494 aa9.52□□□□□ -0.89
NLRC4-202ENST00000360906 ANKRD30AQ9BXX3 1397 aa9.52□□□□□ -0.89
NLRC4-202ENST00000360906 CEBPAP49715 358 aaPredicted RBP9.51□□□□□ -0.89
NLRC4-202ENST00000360906 ESF1Q9H501 851 aaKnown RBP9.51□□□□□ -0.89
NLRC4-202ENST00000360906 SIN3AQ96ST3 1273 aa9.5□□□□□ -0.89
NLRC4-202ENST00000360906 RSPH4AQ5TD94 716 aa9.5□□□□□ -0.89
NLRC4-202ENST00000360906 PREX2Q70Z35 1606 aa9.5□□□□□ -0.89
NLRC4-202ENST00000360906 CCDC141Q6ZP82 1450 aa9.5□□□□□ -0.89
NLRC4-202ENST00000360906 CHGAP10645 457 aaKnown RBP9.5□□□□□ -0.89
NLRC4-202ENST00000360906 NUP155O75694 1391 aa9.49□□□□□ -0.89
NLRC4-202ENST00000360906 NCOA1Q15788 1441 aa9.49□□□□□ -0.89
NLRC4-202ENST00000360906 SETD5Q9C0A6 1442 aa9.49□□□□□ -0.89
NLRC4-202ENST00000360906 PLEKHH2Q8IVE3 1493 aa9.49□□□□□ -0.89
NLRC4-202ENST00000360906 TEX14Q8IWB6 1497 aa9.49□□□□□ -0.89
NLRC4-202ENST00000360906 WASHC2CQ9Y4E1 1318 aa9.48□□□□□ -0.89
NLRC4-202ENST00000360906 PKD2Q13563 968 aa9.48□□□□□ -0.89
NLRC4-202ENST00000360906 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
NLRC4-202ENST00000360906 NAIPQ13075 1403 aa9.47□□□□□ -0.89
NLRC4-202ENST00000360906 POGZQ7Z3K3 1410 aa9.47□□□□□ -0.89
NLRC4-202ENST00000360906 ANKRD50Q9ULJ7 1429 aa9.47□□□□□ -0.89
NLRC4-202ENST00000360906 RGL3Q3MIN7 710 aa9.47□□□□□ -0.89
NLRC4-202ENST00000360906 MAP3K4Q9Y6R4 1608 aa9.47□□□□□ -0.89
NLRC4-202ENST00000360906 MPHOSPH9Q99550 1183 aa9.46□□□□□ -0.89
NLRC4-202ENST00000360906 KIAA1107Q9UPP5 1409 aa9.46□□□□□ -0.89
NLRC4-202ENST00000360906 TCOF1Q13428 1488 aaKnown RBP9.46□□□□□ -0.9
NLRC4-202ENST00000360906 ZNF518AQ6AHZ1 1483 aa9.46□□□□□ -0.9
NLRC4-202ENST00000360906 ABCC1P33527 1531 aa9.46□□□□□ -0.9
NLRC4-202ENST00000360906 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.9
NLRC4-202ENST00000360906 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
NLRC4-202ENST00000360906 NEO1Q92859 1461 aa9.45□□□□□ -0.9
NLRC4-202ENST00000360906 ZNF326Q5BKZ1 582 aaKnown RBP9.45□□□□□ -0.9
NLRC4-202ENST00000360906 KDM6BO15054 1643 aa9.45□□□□□ -0.9
NLRC4-202ENST00000360906 GLI2P10070 1586 aa9.45□□□□□ -0.9
NLRC4-202ENST00000360906 PPRC1Q5VV67 1664 aaKnown RBP9.44□□□□□ -0.9
NLRC4-202ENST00000360906 CFAP65Q6ZU64 1925 aaKnown RBP9.43□□□□□ -0.9
NLRC4-202ENST00000360906 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
NLRC4-202ENST00000360906 DNMT1P26358 1616 aaKnown RBP9.42□□□□□ -0.9
NLRC4-202ENST00000360906 DHX29Q7Z478 1369 aaKnown RBP9.42□□□□□ -0.9
NLRC4-202ENST00000360906 ATP7AQ04656 1500 aa9.42□□□□□ -0.9
NLRC4-202ENST00000360906 HFM1A2PYH4 1435 aa9.41□□□□□ -0.9
NLRC4-202ENST00000360906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
NLRC4-202ENST00000360906 A2MP01023 1474 aa9.4□□□□□ -0.9
NLRC4-202ENST00000360906 STAG3Q9UJ98 1225 aa9.4□□□□□ -0.91
NLRC4-202ENST00000360906 ARAP3Q8WWN8 1544 aa9.38□□□□□ -0.91
NLRC4-202ENST00000360906 ROCK1Q13464 1354 aa9.38□□□□□ -0.91
NLRC4-202ENST00000360906 DHX57Q6P158 1386 aaKnown RBP9.38□□□□□ -0.91
NLRC4-202ENST00000360906 ZFYVE16Q7Z3T8 1539 aa9.38□□□□□ -0.91
NLRC4-202ENST00000360906 KIDINS220Q9ULH0 1771 aa9.37□□□□□ -0.91
NLRC4-202ENST00000360906 ATP10AO60312 1499 aa9.37□□□□□ -0.91
NLRC4-202ENST00000360906 KANK1Q14678 1352 aa9.37□□□□□ -0.91
NLRC4-202ENST00000360906 BCANQ96GW7 911 aa9.37□□□□□ -0.91
NLRC4-202ENST00000360906 FRMPD1Q5SYB0 1578 aa9.36□□□□□ -0.91
NLRC4-202ENST00000360906 MLH3Q9UHC1 1453 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms