RNA–Protein interactions for RNA: ENST00000360835.8

SCUBE1-202, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-202ENST00000360835 ROCK2O75116 1388 aaKnown RBP18.71■□□□□ 0.59
SCUBE1-202ENST00000360835 RCAN3Q9UKA8 241 aa18.7■□□□□ 0.58
SCUBE1-202ENST00000360835 TCERG1O14776 1098 aaKnown RBP18.69■□□□□ 0.58
SCUBE1-202ENST00000360835 OS9Q13438 667 aaPredicted RBP18.69■□□□□ 0.58
SCUBE1-202ENST00000360835 MORC1Q86VD1 984 aa18.69■□□□□ 0.58
SCUBE1-202ENST00000360835 NRDCO43847 1150 aa18.68■□□□□ 0.58
SCUBE1-202ENST00000360835 MCCP23508 829 aa18.68■□□□□ 0.58
SCUBE1-202ENST00000360835 CHAF1AQ13111 956 aaPredicted RBP18.68■□□□□ 0.58
SCUBE1-202ENST00000360835 PTMSP20962 102 aa18.68■□□□□ 0.58
SCUBE1-202ENST00000360835 MSNP26038 577 aaKnown RBP18.67■□□□□ 0.58
SCUBE1-202ENST00000360835 PLEKHG5O94827 1062 aa18.67■□□□□ 0.58
SCUBE1-202ENST00000360835 PKD2Q13563 968 aa18.67■□□□□ 0.58
SCUBE1-202ENST00000360835 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
SCUBE1-202ENST00000360835 PLCB2Q00722 1185 aa18.66■□□□□ 0.58
SCUBE1-202ENST00000360835 EIF3AQ14152 1382 aaKnown RBP18.65■□□□□ 0.58
SCUBE1-202ENST00000360835 KCNJ4P48050 445 aa18.65■□□□□ 0.58
SCUBE1-202ENST00000360835 HAP1P54257 671 aaPredicted RBP18.65■□□□□ 0.58
SCUBE1-202ENST00000360835 FGD1P98174 961 aa18.64■□□□□ 0.58
SCUBE1-202ENST00000360835 IPO8O15397 1037 aaKnown RBP18.63■□□□□ 0.57
SCUBE1-202ENST00000360835 MPHOSPH9Q99550 1183 aa18.63■□□□□ 0.57
SCUBE1-202ENST00000360835 TSHZ2Q9NRE2 1034 aa18.63■□□□□ 0.57
SCUBE1-202ENST00000360835 ANKRD30AQ9BXX3 1397 aa18.62■□□□□ 0.57
SCUBE1-202ENST00000360835 GOLGA6L4A6NEF3 574 aa18.61■□□□□ 0.57
SCUBE1-202ENST00000360835 GBP4Q96PP9 640 aa18.61■□□□□ 0.57
SCUBE1-202ENST00000360835 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
SCUBE1-202ENST00000360835 FOXD1Q16676 465 aa18.6■□□□□ 0.57
SCUBE1-202ENST00000360835 SRPK2P78362 688 aaKnown RBP18.59■□□□□ 0.57
SCUBE1-202ENST00000360835 RWDD1Q9H446 243 aaPredicted RBP18.59■□□□□ 0.57
SCUBE1-202ENST00000360835 SPRYD3Q8NCJ5 442 aa18.58■□□□□ 0.57
SCUBE1-202ENST00000360835 IPO9Q96P70 1041 aaKnown RBP18.58■□□□□ 0.57
SCUBE1-202ENST00000360835 NUP155O75694 1391 aa18.58■□□□□ 0.56
SCUBE1-202ENST00000360835 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.56
SCUBE1-202ENST00000360835 RAPGEF2Q9Y4G8 1499 aa18.57■□□□□ 0.56
SCUBE1-202ENST00000360835 CALD1Q05682 793 aaKnown RBP18.57■□□□□ 0.56
SCUBE1-202ENST00000360835 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
SCUBE1-202ENST00000360835 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
SCUBE1-202ENST00000360835 PDE3BQ13370 1112 aa18.54■□□□□ 0.56
SCUBE1-202ENST00000360835 PMFBP1Q8TBY8 1022 aa18.53■□□□□ 0.56
SCUBE1-202ENST00000360835 ITPRIPQ8IWB1 547 aa18.52■□□□□ 0.55
SCUBE1-202ENST00000360835 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
SCUBE1-202ENST00000360835 HDGFP51858 240 aaKnown RBP18.51■□□□□ 0.55
SCUBE1-202ENST00000360835 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
SCUBE1-202ENST00000360835 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
SCUBE1-202ENST00000360835 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
SCUBE1-202ENST00000360835 DHX57Q6P158 1386 aaKnown RBP18.5■□□□□ 0.55
SCUBE1-202ENST00000360835 FHOD3Q2V2M9 1422 aa18.49■□□□□ 0.55
SCUBE1-202ENST00000360835 DRC7Q8IY82 874 aa18.49■□□□□ 0.55
SCUBE1-202ENST00000360835 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
SCUBE1-202ENST00000360835 SLKQ9H2G2 1235 aaPredicted RBP18.49■□□□□ 0.55
SCUBE1-202ENST00000360835 RTF1Q92541 710 aaKnown RBP18.49■□□□□ 0.55
SCUBE1-202ENST00000360835 KIAA1211Q6ZU35 1233 aa18.48■□□□□ 0.55
SCUBE1-202ENST00000360835 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
SCUBE1-202ENST00000360835 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.55
SCUBE1-202ENST00000360835 SYAP1Q96A49 352 aaPredicted RBP18.47■□□□□ 0.55
SCUBE1-202ENST00000360835 LMOD2Q6P5Q4 547 aa18.47■□□□□ 0.55
SCUBE1-202ENST00000360835 L3MBTL2Q969R5 705 aa18.47■□□□□ 0.55
SCUBE1-202ENST00000360835 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
SCUBE1-202ENST00000360835 KIAA2012Q0VF49 1180 aa18.45■□□□□ 0.54
SCUBE1-202ENST00000360835 SAFB2Q14151 953 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCUBE1-202ENST00000360835 GOLGA6L3A6NEY3 463 aa18.44■□□□□ 0.54
SCUBE1-202ENST00000360835 GZF1Q9H116 711 aaPredicted RBP18.44■□□□□ 0.54
SCUBE1-202ENST00000360835 TAOK2Q9UL54 1235 aa18.43■□□□□ 0.54
SCUBE1-202ENST00000360835 MYBBP1AQ9BQG0 1328 aaKnown RBP18.43■□□□□ 0.54
SCUBE1-202ENST00000360835 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
SCUBE1-202ENST00000360835 CENPJQ9HC77 1338 aaPredicted RBP18.42■□□□□ 0.54
SCUBE1-202ENST00000360835 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
SCUBE1-202ENST00000360835 MFAP1P55081 439 aaKnown RBP18.4■□□□□ 0.54
SCUBE1-202ENST00000360835 SMC4Q9NTJ3 1288 aa18.4■□□□□ 0.54
SCUBE1-202ENST00000360835 APBB1O00213 710 aa18.39■□□□□ 0.54
SCUBE1-202ENST00000360835 HTATSF1O43719 755 aaKnown RBP18.39■□□□□ 0.53
SCUBE1-202ENST00000360835 GNL2Q13823 731 aaKnown RBP18.37■□□□□ 0.53
SCUBE1-202ENST00000360835 STK26Q9P289 416 aa18.37■□□□□ 0.53
SCUBE1-202ENST00000360835 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
SCUBE1-202ENST00000360835 SOX12O15370 315 aa18.37■□□□□ 0.53
SCUBE1-202ENST00000360835 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
SCUBE1-202ENST00000360835 RSPH4AQ5TD94 716 aa18.36■□□□□ 0.53
SCUBE1-202ENST00000360835 NPHP1O15259 732 aa18.36■□□□□ 0.53
SCUBE1-202ENST00000360835 HMMRO75330 724 aa18.36■□□□□ 0.53
SCUBE1-202ENST00000360835 SPAG9O60271 1321 aaKnown RBP18.36■□□□□ 0.53
SCUBE1-202ENST00000360835 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
SCUBE1-202ENST00000360835 CCDC144AA2RUR9 1427 aa18.35■□□□□ 0.53
SCUBE1-202ENST00000360835 CENPQQ7L2Z9 268 aaPredicted RBP18.35■□□□□ 0.53
SCUBE1-202ENST00000360835 TERF2IPQ9NYB0 399 aa18.35■□□□□ 0.53
SCUBE1-202ENST00000360835 CUX1P39880 1505 aa18.35■□□□□ 0.53
SCUBE1-202ENST00000360835 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
SCUBE1-202ENST00000360835 GGT6Q6P531 493 aa18.33■□□□□ 0.53
SCUBE1-202ENST00000360835 DDX11L8A8MPP1 907 aa18.33■□□□□ 0.52
SCUBE1-202ENST00000360835 CCDC146Q8IYE0 955 aa18.32■□□□□ 0.52
SCUBE1-202ENST00000360835 STK31Q9BXU1 1019 aa18.32■□□□□ 0.52
SCUBE1-202ENST00000360835 USP47Q96K76 1375 aa18.32■□□□□ 0.52
SCUBE1-202ENST00000360835 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
SCUBE1-202ENST00000360835 PHF14O94880 888 aa18.31■□□□□ 0.52
SCUBE1-202ENST00000360835 UACAQ9BZF9 1416 aa18.31■□□□□ 0.52
SCUBE1-202ENST00000360835 LMOD3Q0VAK6 560 aa18.31■□□□□ 0.52
SCUBE1-202ENST00000360835 FAM161AQ3B820 660 aa18.3■□□□□ 0.52
SCUBE1-202ENST00000360835 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
SCUBE1-202ENST00000360835 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
SCUBE1-202ENST00000360835 TULP1O00294 542 aaPredicted RBP18.3■□□□□ 0.52
SCUBE1-202ENST00000360835 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
SCUBE1-202ENST00000360835 HDAC5Q9UQL6 1122 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms