RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 DDX10Q13206 875 aaKnown RBP37.48■■■■□ 3.59
CUEDC1-201ENST00000360238 PRG4Q92954 1404 aaPredicted RBP37.44■■■■□ 3.58
CUEDC1-201ENST00000360238 ADGBQ8N7X0 1667 aa37.44■■■■□ 3.58
CUEDC1-201ENST00000360238 TRIM52Q96A61 297 aa37.44■■■■□ 3.58
CUEDC1-201ENST00000360238 KIF14Q15058 1648 aa37.42■■■■□ 3.58
CUEDC1-201ENST00000360238 CAMSAP2Q08AD1 1489 aa37.41■■■■□ 3.58
CUEDC1-201ENST00000360238 CROCC2H7BZ55 1655 aa37.4■■■■□ 3.58
CUEDC1-201ENST00000360238 ABCA8O94911 1581 aa37.39■■■■□ 3.58
CUEDC1-201ENST00000360238 JPH4Q96JJ6 628 aa37.39■■■■□ 3.58
CUEDC1-201ENST00000360238 MPHOSPH9Q99550 1183 aa37.39■■■■□ 3.58
CUEDC1-201ENST00000360238 FBLN2P98095 1184 aa37.38■■■■□ 3.57
CUEDC1-201ENST00000360238 GPATCH8Q9UKJ3 1502 aaKnown RBP37.37■■■■□ 3.57
CUEDC1-201ENST00000360238 ZNF644Q9H582 1327 aaPredicted RBP37.34■■■■□ 3.57
CUEDC1-201ENST00000360238 HIRIP3Q9BW71 556 aaPredicted RBP37.32■■■■□ 3.57
CUEDC1-201ENST00000360238 ADGRL2O95490 1459 aa37.28■■■■□ 3.56
CUEDC1-201ENST00000360238 CFDP1Q9UEE9 299 aaPredicted RBP37.27■■■■□ 3.56
CUEDC1-201ENST00000360238 CDC42BPAQ5VT25 1732 aa37.25■■■■□ 3.55
CUEDC1-201ENST00000360238 KCNH8Q96L42 1107 aa37.25■■■■□ 3.55
CUEDC1-201ENST00000360238 RPRD2Q5VT52 1461 aaKnown RBP37.24■■■■□ 3.55
CUEDC1-201ENST00000360238 CCER2I3L3R5 266 aa37.24■■■■□ 3.55
CUEDC1-201ENST00000360238 ANKRD30BQ9BXX2 1392 aa37.23■■■■□ 3.55
CUEDC1-201ENST00000360238 NCOA1Q15788 1441 aa37.21■■■■□ 3.55
CUEDC1-201ENST00000360238 ANP32CO43423 234 aa37.19■■■■□ 3.54
CUEDC1-201ENST00000360238 ABCC10Q5T3U5 1492 aa37.18■■■■□ 3.54
CUEDC1-201ENST00000360238 ATP10BO94823 1461 aa37.17■■■■□ 3.54
CUEDC1-201ENST00000360238 TEX14Q8IWB6 1497 aa37.15■■■■□ 3.54
CUEDC1-201ENST00000360238 PZPP20742 1482 aa37.14■■■■□ 3.54
CUEDC1-201ENST00000360238 SHANK2Q9UPX8 1470 aa37.13■■■■□ 3.53
CUEDC1-201ENST00000360238 PLEKHD1A6NEE1 506 aa37.1■■■■□ 3.53
CUEDC1-201ENST00000360238 L3MBTL2Q969R5 705 aa37.1■■■■□ 3.53
CUEDC1-201ENST00000360238 FOXD1Q16676 465 aa37.09■■■■□ 3.53
CUEDC1-201ENST00000360238 CHD1O14646 1710 aa37.08■■■■□ 3.53
CUEDC1-201ENST00000360238 SLC4A1APQ9BWU0 796 aaKnown RBP37.08■■■■□ 3.53
CUEDC1-201ENST00000360238 ANKRD30AQ9BXX3 1397 aa37.08■■■■□ 3.53
CUEDC1-201ENST00000360238 HSPA5P11021 654 aaKnown RBP37.05■■■■□ 3.52
CUEDC1-201ENST00000360238 EIF4G2P78344 907 aaKnown RBP eCLIP37.04■■■■□ 3.52
CUEDC1-201ENST00000360238 ZNF777Q9ULD5 760 aaPredicted RBP37.02■■■■□ 3.52
CUEDC1-201ENST00000360238 SUPT16HQ9Y5B9 1047 aaKnown RBP37■■■■□ 3.51
CUEDC1-201ENST00000360238 SHROOM2Q13796 1616 aa36.99■■■■□ 3.51
CUEDC1-201ENST00000360238 PTPRGP23470 1445 aa36.99■■■■□ 3.51
CUEDC1-201ENST00000360238 ARHGEF5Q12774 1597 aa36.99■■■■□ 3.51
CUEDC1-201ENST00000360238 KIAA1107Q9UPP5 1409 aa36.97■■■■□ 3.51
CUEDC1-201ENST00000360238 POLR1AO95602 1720 aaPredicted RBP36.97■■■■□ 3.51
CUEDC1-201ENST00000360238 WASHC2AQ641Q2 1341 aa36.96■■■■□ 3.51
CUEDC1-201ENST00000360238 C9orf84Q5VXU9 1444 aa36.96■■■■□ 3.51
CUEDC1-201ENST00000360238 ANKRD50Q9ULJ7 1429 aa36.96■■■■□ 3.51
CUEDC1-201ENST00000360238 PREX2Q70Z35 1606 aa36.93■■■■□ 3.5
CUEDC1-201ENST00000360238 KDM5DQ9BY66 1539 aa36.91■■■■□ 3.5
CUEDC1-201ENST00000360238 MBD5Q9P267 1494 aa36.9■■■■□ 3.5
CUEDC1-201ENST00000360238 CDC42BPBQ9Y5S2 1711 aa36.88■■■■□ 3.49
CUEDC1-201ENST00000360238 CNTLNQ9NXG0 1405 aa36.87■■■■□ 3.49
CUEDC1-201ENST00000360238 NBPF8Q3BBV2 869 aa36.85■■■■□ 3.49
CUEDC1-201ENST00000360238 SAMD9LQ8IVG5 1584 aa36.83■■■■□ 3.49
CUEDC1-201ENST00000360238 SPATA31E1Q6ZUB1 1445 aa36.83■■■■□ 3.49
CUEDC1-201ENST00000360238 CCDC7Q96M83 1385 aa36.81■■■■□ 3.48
CUEDC1-201ENST00000360238 CCDC141Q6ZP82 1450 aa36.78■■■■□ 3.48
CUEDC1-201ENST00000360238 TSPY4P0CV99 314 aa36.76■■■■□ 3.48
CUEDC1-201ENST00000360238 TSPY10P0CW01 314 aa36.76■■■■□ 3.48
CUEDC1-201ENST00000360238 PKD2Q13563 968 aa36.76■■■■□ 3.48
CUEDC1-201ENST00000360238 KIF15Q9NS87 1388 aa36.73■■■■□ 3.47
CUEDC1-201ENST00000360238 ABCC2Q92887 1545 aa36.71■■■■□ 3.47
CUEDC1-201ENST00000360238 NUP155O75694 1391 aa36.71■■■■□ 3.47
CUEDC1-201ENST00000360238 TTC37Q6PGP7 1564 aa36.7■■■■□ 3.47
CUEDC1-201ENST00000360238 MAST1Q9Y2H9 1570 aa36.69■■■■□ 3.46
CUEDC1-201ENST00000360238 ARHGEF12Q9NZN5 1544 aa36.69■■■■□ 3.46
CUEDC1-201ENST00000360238 RSPH4AQ5TD94 716 aa36.67■■■■□ 3.46
CUEDC1-201ENST00000360238 C11orf95C9JLR9 678 aaPredicted RBP36.66■■■■□ 3.46
CUEDC1-201ENST00000360238 MYO5CQ9NQX4 1742 aa36.66■■■■□ 3.46
CUEDC1-201ENST00000360238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.65■■■■□ 3.46
CUEDC1-201ENST00000360238 HNRNPMP52272 730 aaKnown RBP eCLIP36.64■■■■□ 3.46
CUEDC1-201ENST00000360238 UHRF1BP1Q6BDS2 1440 aa36.64■■■■□ 3.46
CUEDC1-201ENST00000360238 ERCC6L2Q5T890 1561 aa36.62■■■■□ 3.45
CUEDC1-201ENST00000360238 SYCP2Q9BX26 1530 aa36.61■■■■□ 3.45
CUEDC1-201ENST00000360238 KDM5CP41229 1560 aa36.61■■■■□ 3.45
CUEDC1-201ENST00000360238 ARHGAP5Q13017 1502 aa36.6■■■■□ 3.45
CUEDC1-201ENST00000360238 KIF7Q2M1P5 1343 aa36.59■■■■□ 3.45
CUEDC1-201ENST00000360238 RALGAPBQ86X10 1494 aa36.58■■■■□ 3.45
CUEDC1-201ENST00000360238 UNC13BO14795 1591 aa36.56■■■■□ 3.44
CUEDC1-201ENST00000360238 PLXNC1O60486 1568 aa36.56■■■■□ 3.44
CUEDC1-201ENST00000360238 PLEKHH2Q8IVE3 1493 aa36.55■■■■□ 3.44
CUEDC1-201ENST00000360238 CLASP1Q7Z460 1538 aa36.55■■■■□ 3.44
CUEDC1-201ENST00000360238 FAM135AQ9P2D6 1515 aa36.55■■■■□ 3.44
CUEDC1-201ENST00000360238 USP47Q96K76 1375 aa36.53■■■■□ 3.44
CUEDC1-201ENST00000360238 BCORL1Q5H9F3 1711 aa36.52■■■■□ 3.44
CUEDC1-201ENST00000360238 PRKRIP1Q9H875 184 aaPredicted RBP36.51■■■■□ 3.44
CUEDC1-201ENST00000360238 ZCCHC11Q5TAX3 1644 aaKnown RBP36.48■■■■□ 3.43
CUEDC1-201ENST00000360238 UHRF1BP1LA0JNW5 1464 aa36.47■■■■□ 3.43
CUEDC1-201ENST00000360238 NEFLP07196 543 aa36.46■■■■□ 3.43
CUEDC1-201ENST00000360238 FKBP8Q14318 412 aa36.46■■■■□ 3.43
CUEDC1-201ENST00000360238 ARID4BQ4LE39 1312 aaPredicted RBP36.45■■■■□ 3.43
CUEDC1-201ENST00000360238 HNRNPUQ00839 825 aaKnown RBP eCLIP36.43■■■■□ 3.42
CUEDC1-201ENST00000360238 IQGAP3Q86VI3 1631 aa36.41■■■■□ 3.42
CUEDC1-201ENST00000360238 ZNF326Q5BKZ1 582 aaKnown RBP36.4■■■■□ 3.42
CUEDC1-201ENST00000360238 DUOX2Q9NRD8 1548 aa36.36■■■■□ 3.41
CUEDC1-201ENST00000360238 PLCH2O75038 1416 aa36.34■■■■□ 3.41
CUEDC1-201ENST00000360238 MAGI2Q86UL8 1455 aa36.32■■■■□ 3.41
CUEDC1-201ENST00000360238 DHX29Q7Z478 1369 aaKnown RBP36.32■■■■□ 3.41
CUEDC1-201ENST00000360238 ROCK2O75116 1388 aaKnown RBP36.31■■■■□ 3.4
CUEDC1-201ENST00000360238 CCDC184Q52MB2 194 aa36.31■■■■□ 3.4
CUEDC1-201ENST00000360238 ABCC1P33527 1531 aa36.31■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms