RNA–Protein interactions for RNA: ENST00000358743.5

SMTN-203, Transcript of smoothelin, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SMTN, Length 3,198 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-203ENST00000358743 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.58
SMTN-203ENST00000358743 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
SMTN-203ENST00000358743 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
SMTN-203ENST00000358743 PKNOX2Q96KN3 472 aa18.69■□□□□ 0.58
SMTN-203ENST00000358743 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
SMTN-203ENST00000358743 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
SMTN-203ENST00000358743 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
SMTN-203ENST00000358743 KDM6BO15054 1643 aa18.66■□□□□ 0.58
SMTN-203ENST00000358743 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
SMTN-203ENST00000358743 ZNF326Q5BKZ1 582 aaKnown RBP18.63■□□□□ 0.57
SMTN-203ENST00000358743 PLEKHG5O94827 1062 aa18.63■□□□□ 0.57
SMTN-203ENST00000358743 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
SMTN-203ENST00000358743 KIAA0556O60303 1618 aa18.6■□□□□ 0.57
SMTN-203ENST00000358743 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
SMTN-203ENST00000358743 ROCK1Q13464 1354 aa18.6■□□□□ 0.57
SMTN-203ENST00000358743 FKBP8Q14318 412 aa18.59■□□□□ 0.57
SMTN-203ENST00000358743 MPHOSPH9Q99550 1183 aa18.58■□□□□ 0.57
SMTN-203ENST00000358743 DNMT1P26358 1616 aaKnown RBP18.58■□□□□ 0.56
SMTN-203ENST00000358743 DISP1Q96F81 1524 aa18.58■□□□□ 0.56
SMTN-203ENST00000358743 DAPK1P53355 1430 aa18.57■□□□□ 0.56
SMTN-203ENST00000358743 ZNF608Q9ULD9 1512 aaPredicted RBP18.56■□□□□ 0.56
SMTN-203ENST00000358743 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
SMTN-203ENST00000358743 HSPA5P11021 654 aaKnown RBP18.55■□□□□ 0.56
SMTN-203ENST00000358743 RAPGEF6Q8TEU7 1601 aa18.55■□□□□ 0.56
SMTN-203ENST00000358743 NEFLP07196 543 aa18.54■□□□□ 0.56
SMTN-203ENST00000358743 NUP153P49790 1475 aaKnown RBP18.54■□□□□ 0.56
SMTN-203ENST00000358743 WASHC2AQ641Q2 1341 aa18.54■□□□□ 0.56
SMTN-203ENST00000358743 PODXL2Q9NZ53 605 aa18.54■□□□□ 0.56
SMTN-203ENST00000358743 RTN4Q9NQC3 1192 aaKnown RBP18.53■□□□□ 0.56
SMTN-203ENST00000358743 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMTN-203ENST00000358743 ABCC5O15440 1437 aa18.53■□□□□ 0.56
SMTN-203ENST00000358743 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.55
SMTN-203ENST00000358743 RPRD2Q5VT52 1461 aaKnown RBP18.51■□□□□ 0.55
SMTN-203ENST00000358743 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
SMTN-203ENST00000358743 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
SMTN-203ENST00000358743 ANKRD30BQ9BXX2 1392 aa18.51■□□□□ 0.55
SMTN-203ENST00000358743 FANCIQ9NVI1 1328 aa18.51■□□□□ 0.55
SMTN-203ENST00000358743 L3MBTL2Q969R5 705 aa18.5■□□□□ 0.55
SMTN-203ENST00000358743 CDK11AQ9UQ88 783 aaPredicted RBP18.48■□□□□ 0.55
SMTN-203ENST00000358743 EIF4G3O43432 1585 aaKnown RBP18.48■□□□□ 0.55
SMTN-203ENST00000358743 CNTLNQ9NXG0 1405 aa18.48■□□□□ 0.55
SMTN-203ENST00000358743 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
SMTN-203ENST00000358743 TEX14Q8IWB6 1497 aa18.47■□□□□ 0.55
SMTN-203ENST00000358743 NCOA1Q15788 1441 aa18.46■□□□□ 0.55
SMTN-203ENST00000358743 ITSN2Q9NZM3 1697 aa18.45■□□□□ 0.54
SMTN-203ENST00000358743 TROQ12816 1431 aaPredicted RBP18.44■□□□□ 0.54
SMTN-203ENST00000358743 POLR1AO95602 1720 aaPredicted RBP18.44■□□□□ 0.54
SMTN-203ENST00000358743 IL27Q8NEV9 243 aa18.43■□□□□ 0.54
SMTN-203ENST00000358743 ADGBQ8N7X0 1667 aa18.43■□□□□ 0.54
SMTN-203ENST00000358743 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
SMTN-203ENST00000358743 ADCY10Q96PN6 1610 aa18.42■□□□□ 0.54
SMTN-203ENST00000358743 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
SMTN-203ENST00000358743 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMTN-203ENST00000358743 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
SMTN-203ENST00000358743 NBR1Q14596 966 aa18.4■□□□□ 0.54
SMTN-203ENST00000358743 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
SMTN-203ENST00000358743 SPATA31E1Q6ZUB1 1445 aa18.39■□□□□ 0.53
SMTN-203ENST00000358743 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
SMTN-203ENST00000358743 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
SMTN-203ENST00000358743 PZPP20742 1482 aa18.39■□□□□ 0.53
SMTN-203ENST00000358743 CROCC2H7BZ55 1655 aa18.39■□□□□ 0.53
SMTN-203ENST00000358743 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
SMTN-203ENST00000358743 ADGRL2O95490 1459 aa18.38■□□□□ 0.53
SMTN-203ENST00000358743 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
SMTN-203ENST00000358743 FAM9BQ8IZU0 186 aa18.38■□□□□ 0.53
SMTN-203ENST00000358743 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
SMTN-203ENST00000358743 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
SMTN-203ENST00000358743 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
SMTN-203ENST00000358743 PLB1Q6P1J6 1458 aa18.35■□□□□ 0.53
SMTN-203ENST00000358743 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
SMTN-203ENST00000358743 KIF14Q15058 1648 aa18.35■□□□□ 0.53
SMTN-203ENST00000358743 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
SMTN-203ENST00000358743 MBD5Q9P267 1494 aa18.32■□□□□ 0.52
SMTN-203ENST00000358743 CARMIL2Q6F5E8 1435 aa18.32■□□□□ 0.52
SMTN-203ENST00000358743 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
SMTN-203ENST00000358743 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
SMTN-203ENST00000358743 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
SMTN-203ENST00000358743 NUP160Q12769 1436 aa18.3■□□□□ 0.52
SMTN-203ENST00000358743 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
SMTN-203ENST00000358743 ANKRD30AQ9BXX3 1397 aa18.29■□□□□ 0.52
SMTN-203ENST00000358743 CDC42BPAQ5VT25 1732 aa18.27■□□□□ 0.52
SMTN-203ENST00000358743 SHANK2Q9UPX8 1470 aa18.26■□□□□ 0.51
SMTN-203ENST00000358743 ABCA8O94911 1581 aa18.25■□□□□ 0.51
SMTN-203ENST00000358743 MRS2Q9HD23 443 aa18.25■□□□□ 0.51
SMTN-203ENST00000358743 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
SMTN-203ENST00000358743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■□□□□ 10.9
SMTN-203ENST00000358743 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
SMTN-203ENST00000358743 ZBED9Q6R2W3 1325 aa18.24■□□□□ 0.51
SMTN-203ENST00000358743 ABCC10Q5T3U5 1492 aa18.23■□□□□ 0.51
SMTN-203ENST00000358743 GLIPR1L2Q4G1C9 344 aa18.22■□□□□ 0.51
SMTN-203ENST00000358743 PKD2Q13563 968 aa18.22■□□□□ 0.51
SMTN-203ENST00000358743 BCORL1Q5H9F3 1711 aa18.22■□□□□ 0.51
SMTN-203ENST00000358743 KDM5CP41229 1560 aa18.21■□□□□ 0.51
SMTN-203ENST00000358743 USP47Q96K76 1375 aa18.21■□□□□ 0.51
SMTN-203ENST00000358743 ARID4BQ4LE39 1312 aaPredicted RBP18.2■□□□□ 0.5
SMTN-203ENST00000358743 KDM5DQ9BY66 1539 aa18.2■□□□□ 0.5
SMTN-203ENST00000358743 UHRF1BP1Q6BDS2 1440 aa18.2■□□□□ 0.5
SMTN-203ENST00000358743 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
SMTN-203ENST00000358743 ATP10BO94823 1461 aa18.19■□□□□ 0.5
SMTN-203ENST00000358743 C9orf84Q5VXU9 1444 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms