RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 BCORL1Q5H9F3 1711 aa25.35■■□□□ 1.65
COPS7B-202ENST00000357490 PLCH2O75038 1416 aa25.35■■□□□ 1.65
COPS7B-202ENST00000357490 ZMYM4Q5VZL5 1548 aa25.34■■□□□ 1.65
COPS7B-202ENST00000357490 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
COPS7B-202ENST00000357490 MAGI2Q86UL8 1455 aa25.28■■□□□ 1.64
COPS7B-202ENST00000357490 ARID4BQ4LE39 1312 aaPredicted RBP25.28■■□□□ 1.64
COPS7B-202ENST00000357490 ZFYVE16Q7Z3T8 1539 aa25.27■■□□□ 1.64
COPS7B-202ENST00000357490 MTUS2Q5JR59 1369 aa25.27■■□□□ 1.64
COPS7B-202ENST00000357490 EFCAB2Q5VUJ9 269 aa25.25■■□□□ 1.63
COPS7B-202ENST00000357490 POGZQ7Z3K3 1410 aa25.25■■□□□ 1.63
COPS7B-202ENST00000357490 SCAPERQ9BY12 1400 aa25.25■■□□□ 1.63
COPS7B-202ENST00000357490 PTPRMP28827 1452 aa25.25■■□□□ 1.63
COPS7B-202ENST00000357490 MADDQ8WXG6 1647 aa25.25■■□□□ 1.63
COPS7B-202ENST00000357490 MAP3K1Q13233 1512 aa25.24■■□□□ 1.63
COPS7B-202ENST00000357490 APLP2Q06481 763 aa25.24■■□□□ 1.63
COPS7B-202ENST00000357490 KANK4Q5T7N3 995 aaPredicted RBP25.23■■□□□ 1.63
COPS7B-202ENST00000357490 ARHGAP5Q13017 1502 aa25.22■■□□□ 1.63
COPS7B-202ENST00000357490 EHBP1L1Q8N3D4 1523 aa25.21■■□□□ 1.63
COPS7B-202ENST00000357490 CDC42BPBQ9Y5S2 1711 aa25.2■■□□□ 1.63
COPS7B-202ENST00000357490 LRRC9Q6ZRR7 1453 aa25.2■■□□□ 1.62
COPS7B-202ENST00000357490 RIMS1Q86UR5 1692 aaKnown RBP25.19■■□□□ 1.62
COPS7B-202ENST00000357490 YEATS2Q9ULM3 1422 aa25.18■■□□□ 1.62
COPS7B-202ENST00000357490 PREX2Q70Z35 1606 aa25.17■■□□□ 1.62
COPS7B-202ENST00000357490 ZNF518AQ6AHZ1 1483 aa25.16■■□□□ 1.62
COPS7B-202ENST00000357490 SIGLEC1Q9BZZ2 1709 aa25.16■■□□□ 1.62
COPS7B-202ENST00000357490 CDC42BPAQ5VT25 1732 aa25.12■■□□□ 1.61
COPS7B-202ENST00000357490 KDM5CP41229 1560 aa25.12■■□□□ 1.61
COPS7B-202ENST00000357490 FER1L4A9Z1Z3 1794 aa25.12■■□□□ 1.61
COPS7B-202ENST00000357490 ATP10AO60312 1499 aa25.11■■□□□ 1.61
COPS7B-202ENST00000357490 SUPT6HQ7KZ85 1726 aaKnown RBP25.09■■□□□ 1.61
COPS7B-202ENST00000357490 C9orf84Q5VXU9 1444 aa25.09■■□□□ 1.61
COPS7B-202ENST00000357490 NCOA2Q15596 1464 aa25.09■■□□□ 1.61
COPS7B-202ENST00000357490 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
COPS7B-202ENST00000357490 CCNB3Q8WWL7 1395 aa25.07■■□□□ 1.6
COPS7B-202ENST00000357490 ITSN2Q9NZM3 1697 aa25.07■■□□□ 1.6
COPS7B-202ENST00000357490 ABCC1P33527 1531 aa25.06■■□□□ 1.6
COPS7B-202ENST00000357490 AFAP1Q8N556 730 aa25.03■■□□□ 1.6
COPS7B-202ENST00000357490 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
COPS7B-202ENST00000357490 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
COPS7B-202ENST00000357490 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
COPS7B-202ENST00000357490 MLECQ14165 292 aa25■■□□□ 1.59
COPS7B-202ENST00000357490 CFDP1Q9UEE9 299 aaPredicted RBP25■■□□□ 1.59
COPS7B-202ENST00000357490 MYT1LQ9UL68 1186 aa25■■□□□ 1.59
COPS7B-202ENST00000357490 MLH3Q9UHC1 1453 aa25■■□□□ 1.59
COPS7B-202ENST00000357490 REREQ9P2R6 1566 aa25■■□□□ 1.59
COPS7B-202ENST00000357490 LMTK3Q96Q04 1460 aa24.99■■□□□ 1.59
COPS7B-202ENST00000357490 ABCA6Q8N139 1617 aa24.98■■□□□ 1.59
COPS7B-202ENST00000357490 ZNF777Q9ULD5 760 aaPredicted RBP24.98■■□□□ 1.59
COPS7B-202ENST00000357490 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.58
COPS7B-202ENST00000357490 SAMD9LQ8IVG5 1584 aa24.94■■□□□ 1.58
COPS7B-202ENST00000357490 KIDINS220Q9ULH0 1771 aa24.94■■□□□ 1.58
COPS7B-202ENST00000357490 ILDR1Q86SU0 546 aaPredicted RBP24.92■■□□□ 1.58
COPS7B-202ENST00000357490 ZNF644Q9H582 1327 aaPredicted RBP24.91■■□□□ 1.58
COPS7B-202ENST00000357490 PLPPR3Q6T4P5 718 aa24.91■■□□□ 1.58
COPS7B-202ENST00000357490 MYOM3Q5VTT5 1437 aa24.9■■□□□ 1.58
COPS7B-202ENST00000357490 SYCP2Q9BX26 1530 aa24.9■■□□□ 1.58
COPS7B-202ENST00000357490 PREX1Q8TCU6 1659 aa24.89■■□□□ 1.58
COPS7B-202ENST00000357490 AGLP35573 1532 aa24.89■■□□□ 1.57
COPS7B-202ENST00000357490 PLEKHH2Q8IVE3 1493 aa24.89■■□□□ 1.57
COPS7B-202ENST00000357490 SETD1BQ9UPS6 1966 aaKnown RBP24.87■■□□□ 1.57
COPS7B-202ENST00000357490 HNRNPMP52272 730 aaKnown RBP eCLIP24.86■■□□□ 1.574e-7■■■■□ 20.7
COPS7B-202ENST00000357490 KIAA1107Q9UPP5 1409 aa24.85■■□□□ 1.57
COPS7B-202ENST00000357490 MIA2Q96PC5 1412 aa24.83■■□□□ 1.57
COPS7B-202ENST00000357490 CAMSAP2Q08AD1 1489 aa24.82■■□□□ 1.56
COPS7B-202ENST00000357490 C3P01024 1663 aa24.81■■□□□ 1.56
COPS7B-202ENST00000357490 ATP7AQ04656 1500 aa24.8■■□□□ 1.56
COPS7B-202ENST00000357490 SPAG9O60271 1321 aaKnown RBP24.8■■□□□ 1.56
COPS7B-202ENST00000357490 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
COPS7B-202ENST00000357490 FGD6Q6ZV73 1430 aa24.79■■□□□ 1.56
COPS7B-202ENST00000357490 HSPA2P54652 639 aa24.79■■□□□ 1.56
COPS7B-202ENST00000357490 ESF1Q9H501 851 aaKnown RBP24.79■■□□□ 1.56
COPS7B-202ENST00000357490 MBD5Q9P267 1494 aa24.77■■□□□ 1.56
COPS7B-202ENST00000357490 PTPN23Q9H3S7 1636 aa24.76■■□□□ 1.55
COPS7B-202ENST00000357490 CEBPAP49715 358 aaPredicted RBP24.76■■□□□ 1.55
COPS7B-202ENST00000357490 CNTLNQ9NXG0 1405 aa24.75■■□□□ 1.55
COPS7B-202ENST00000357490 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
COPS7B-202ENST00000357490 MROH2AA6NES4 1674 aa24.74■■□□□ 1.55
COPS7B-202ENST00000357490 PLXNC1O60486 1568 aa24.72■■□□□ 1.55
COPS7B-202ENST00000357490 UHRF1BP1Q6BDS2 1440 aa24.72■■□□□ 1.55
COPS7B-202ENST00000357490 TCOF1Q13428 1488 aaKnown RBP24.71■■□□□ 1.55
COPS7B-202ENST00000357490 FAM50AQ14320 339 aaKnown RBP24.69■■□□□ 1.54
COPS7B-202ENST00000357490 RSPH4AQ5TD94 716 aa24.69■■□□□ 1.54
COPS7B-202ENST00000357490 A2MP01023 1474 aa24.69■■□□□ 1.54
COPS7B-202ENST00000357490 ARHGEF5Q12774 1597 aa24.68■■□□□ 1.54
COPS7B-202ENST00000357490 FBXO41Q8TF61 875 aa24.68■■□□□ 1.54
COPS7B-202ENST00000357490 CCDC141Q6ZP82 1450 aa24.68■■□□□ 1.54
COPS7B-202ENST00000357490 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
COPS7B-202ENST00000357490 CLTCQ00610 1675 aaKnown RBP24.64■■□□□ 1.53
COPS7B-202ENST00000357490 RTEL1-TNFRSF6BF6WH68 1400 aa24.63■■□□□ 1.53
COPS7B-202ENST00000357490 TSPY4P0CV99 314 aa24.62■■□□□ 1.53
COPS7B-202ENST00000357490 TSPY10P0CW01 314 aa24.62■■□□□ 1.53
COPS7B-202ENST00000357490 ABCC5O15440 1437 aa24.61■■□□□ 1.53
COPS7B-202ENST00000357490 NPATQ14207 1427 aa24.61■■□□□ 1.53
COPS7B-202ENST00000357490 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
COPS7B-202ENST00000357490 DNMT1P26358 1616 aaKnown RBP24.6■■□□□ 1.53
COPS7B-202ENST00000357490 DAPK1P53355 1430 aa24.6■■□□□ 1.53
COPS7B-202ENST00000357490 RRBP1Q9P2E9 1410 aaKnown RBP24.59■■□□□ 1.53
COPS7B-202ENST00000357490 ZMYM3Q14202 1370 aa24.57■■□□□ 1.52
COPS7B-202ENST00000357490 PPP6R1Q9UPN7 881 aa24.57■■□□□ 1.52
COPS7B-202ENST00000357490 CROCC2H7BZ55 1655 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms