RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PHF14O94880 888 aa16.17■□□□□ 0.18
SMC4-202ENST00000357388 CLSTN1O94985 981 aa16.17■□□□□ 0.18
SMC4-202ENST00000357388 CCDC34Q96HJ3 373 aa16.17■□□□□ 0.18
SMC4-202ENST00000357388 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
SMC4-202ENST00000357388 TMX4Q9H1E5 349 aaPredicted RBP16.16■□□□□ 0.18
SMC4-202ENST00000357388 TAOK2Q9UL54 1235 aa16.15■□□□□ 0.18
SMC4-202ENST00000357388 CALRP27797 417 aaKnown RBP16.15■□□□□ 0.18
SMC4-202ENST00000357388 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
SMC4-202ENST00000357388 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
SMC4-202ENST00000357388 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
SMC4-202ENST00000357388 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
SMC4-202ENST00000357388 IPO8O15397 1037 aaKnown RBP16.13■□□□□ 0.17
SMC4-202ENST00000357388 TMF1P82094 1093 aa16.13■□□□□ 0.17
SMC4-202ENST00000357388 KIAA1211Q6ZU35 1233 aa16.13■□□□□ 0.17
SMC4-202ENST00000357388 RWDD1Q9H446 243 aaPredicted RBP16.13■□□□□ 0.17
SMC4-202ENST00000357388 CALD1Q05682 793 aaKnown RBP16.13■□□□□ 0.17
SMC4-202ENST00000357388 SPRYD3Q8NCJ5 442 aa16.12■□□□□ 0.17
SMC4-202ENST00000357388 RTF1Q92541 710 aaKnown RBP16.12■□□□□ 0.17
SMC4-202ENST00000357388 DDX11L8A8MPP1 907 aa16.12■□□□□ 0.17
SMC4-202ENST00000357388 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
SMC4-202ENST00000357388 A0A0U1RQG5 324 aaPredicted RBP16.11■□□□□ 0.17
SMC4-202ENST00000357388 GZF1Q9H116 711 aaPredicted RBP16.11■□□□□ 0.17
SMC4-202ENST00000357388 ARID3AQ99856 593 aa16.11■□□□□ 0.17
SMC4-202ENST00000357388 VSIG10Q8N0Z9 540 aa16.11■□□□□ 0.17
SMC4-202ENST00000357388 GPS2Q13227 327 aa16.1■□□□□ 0.17
SMC4-202ENST00000357388 CEP162Q5TB80 1403 aa16.1■□□□□ 0.17
SMC4-202ENST00000357388 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
SMC4-202ENST00000357388 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
SMC4-202ENST00000357388 SRPK2P78362 688 aaKnown RBP16.09■□□□□ 0.17
SMC4-202ENST00000357388 CCNB3Q8WWL7 1395 aa16.08■□□□□ 0.16
SMC4-202ENST00000357388 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
SMC4-202ENST00000357388 TPM3P06753 285 aa16.07■□□□□ 0.16
SMC4-202ENST00000357388 SLKQ9H2G2 1235 aaPredicted RBP16.07■□□□□ 0.16
SMC4-202ENST00000357388 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
SMC4-202ENST00000357388 MLECQ14165 292 aa16.06■□□□□ 0.16
SMC4-202ENST00000357388 HDGFL2Q7Z4V5 671 aaPredicted RBP16.05■□□□□ 0.16
SMC4-202ENST00000357388 MORC1Q86VD1 984 aa16.04■□□□□ 0.16
SMC4-202ENST00000357388 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
SMC4-202ENST00000357388 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
SMC4-202ENST00000357388 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
SMC4-202ENST00000357388 CSB-PGBD3P0DP91 1061 aa16.03■□□□□ 0.16
SMC4-202ENST00000357388 HDAC5Q9UQL6 1122 aa16.02■□□□□ 0.16
SMC4-202ENST00000357388 SOX12O15370 315 aa16.02■□□□□ 0.15
SMC4-202ENST00000357388 ZNF771Q7L3S4 317 aaPredicted RBP16.01■□□□□ 0.15
SMC4-202ENST00000357388 TEX35Q5T0J7 233 aa16.01■□□□□ 0.15
SMC4-202ENST00000357388 GSE1Q14687 1217 aa16.01■□□□□ 0.15
SMC4-202ENST00000357388 KTN1Q86UP2 1357 aaKnown RBP16.01■□□□□ 0.15
SMC4-202ENST00000357388 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
SMC4-202ENST00000357388 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
SMC4-202ENST00000357388 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
SMC4-202ENST00000357388 CCDC70Q6NSX1 233 aa15.99■□□□□ 0.15
SMC4-202ENST00000357388 BAZ1BQ9UIG0 1483 aaKnown RBP15.99■□□□□ 0.15
SMC4-202ENST00000357388 KIF3AQ9Y496 699 aa15.98■□□□□ 0.15
SMC4-202ENST00000357388 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
SMC4-202ENST00000357388 RALBP1Q15311 655 aa15.98■□□□□ 0.15
SMC4-202ENST00000357388 CHMP4CQ96CF2 233 aa15.97■□□□□ 0.15
SMC4-202ENST00000357388 ST18O60284 1047 aa15.96■□□□□ 0.15
SMC4-202ENST00000357388 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.15
SMC4-202ENST00000357388 FHAD1B1AJZ9 1412 aa15.96■□□□□ 0.15
SMC4-202ENST00000357388 MTERF4Q7Z6M4 381 aaKnown RBP15.96■□□□□ 0.14
SMC4-202ENST00000357388 PDE3BQ13370 1112 aa15.95■□□□□ 0.14
SMC4-202ENST00000357388 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
SMC4-202ENST00000357388 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.95■□□□□ 0.14
SMC4-202ENST00000357388 GPATCH3Q96I76 525 aa15.95■□□□□ 0.14
SMC4-202ENST00000357388 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
SMC4-202ENST00000357388 MFAP1P55081 439 aaKnown RBP15.94■□□□□ 0.14
SMC4-202ENST00000357388 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
SMC4-202ENST00000357388 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
SMC4-202ENST00000357388 MAP7D2Q96T17 732 aa15.94■□□□□ 0.14
SMC4-202ENST00000357388 CCDC9Q9Y3X0 531 aaKnown RBP15.94■□□□□ 0.14
SMC4-202ENST00000357388 ATP6V1DQ9Y5K8 247 aa15.93■□□□□ 0.14
SMC4-202ENST00000357388 GORABQ5T7V8 394 aa15.93■□□□□ 0.14
SMC4-202ENST00000357388 GGT6Q6P531 493 aa15.93■□□□□ 0.14
SMC4-202ENST00000357388 G3V3G9 751 aa15.93■□□□□ 0.14
SMC4-202ENST00000357388 HMMRO75330 724 aa15.93■□□□□ 0.14
SMC4-202ENST00000357388 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
SMC4-202ENST00000357388 ZNF330Q9Y3S2 320 aaPredicted RBP15.92■□□□□ 0.14
SMC4-202ENST00000357388 SIN3AQ96ST3 1273 aa15.92■□□□□ 0.14
SMC4-202ENST00000357388 ITPRIPQ8IWB1 547 aa15.91■□□□□ 0.14
SMC4-202ENST00000357388 SPAG9O60271 1321 aaKnown RBP15.91■□□□□ 0.14
SMC4-202ENST00000357388 FANCIQ9NVI1 1328 aa15.91■□□□□ 0.14
SMC4-202ENST00000357388 SAFB2Q14151 953 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMC4-202ENST00000357388 TAF7LQ5H9L4 462 aa15.9■□□□□ 0.14
SMC4-202ENST00000357388 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
SMC4-202ENST00000357388 TSR1Q2NL82 804 aaKnown RBP15.9■□□□□ 0.14
SMC4-202ENST00000357388 STK31Q9BXU1 1019 aa15.9■□□□□ 0.14
SMC4-202ENST00000357388 TPM1P09493 284 aa15.89■□□□□ 0.13
SMC4-202ENST00000357388 PHLDB1Q86UU1 1377 aa15.89■□□□□ 0.13
SMC4-202ENST00000357388 GOLGA6L19H0YKK7 550 aa15.89■□□□□ 0.13
SMC4-202ENST00000357388 STK26Q9P289 416 aa15.89■□□□□ 0.13
SMC4-202ENST00000357388 PRM3Q9NNZ6 103 aa15.88■□□□□ 0.13
SMC4-202ENST00000357388 EID1Q9Y6B2 187 aa15.88■□□□□ 0.13
SMC4-202ENST00000357388 ACBD3Q9H3P7 528 aa15.87■□□□□ 0.13
SMC4-202ENST00000357388 DDX49Q9Y6V7 483 aaKnown RBP15.87■□□□□ 0.13
SMC4-202ENST00000357388 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
SMC4-202ENST00000357388 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
SMC4-202ENST00000357388 CDR1P51861 262 aa15.85■□□□□ 0.13
SMC4-202ENST00000357388 FAM161AQ3B820 660 aa15.85■□□□□ 0.13
SMC4-202ENST00000357388 ARGLU1Q9NWB6 273 aaPredicted RBP15.85■□□□□ 0.13
SMC4-202ENST00000357388 TPM2P07951 284 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms