RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 NLRP13Q86W25 1043 aa19.94■□□□□ 0.78
TRAPPC11-202ENST00000357207 SLKQ9H2G2 1235 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC11-202ENST00000357207 PRKRIP1Q9H875 184 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC11-202ENST00000357207 TPRNQ4KMQ1 711 aa19.93■□□□□ 0.78
TRAPPC11-202ENST00000357207 EIF4G1Q04637 1599 aaKnown RBP19.92■□□□□ 0.78
TRAPPC11-202ENST00000357207 MORC1Q86VD1 984 aa19.92■□□□□ 0.78
TRAPPC11-202ENST00000357207 PLCB2Q00722 1185 aa19.9■□□□□ 0.78
TRAPPC11-202ENST00000357207 PNNQ9H307 717 aaKnown RBP19.9■□□□□ 0.78
TRAPPC11-202ENST00000357207 POGKQ9P215 609 aa19.9■□□□□ 0.78
TRAPPC11-202ENST00000357207 USP35Q9P2H5 1018 aa19.9■□□□□ 0.78
TRAPPC11-202ENST00000357207 ROCK2O75116 1388 aaKnown RBP19.89■□□□□ 0.77
TRAPPC11-202ENST00000357207 NUP155O75694 1391 aa19.89■□□□□ 0.77
TRAPPC11-202ENST00000357207 ZBED9Q6R2W3 1325 aa19.89■□□□□ 0.77
TRAPPC11-202ENST00000357207 MSNP26038 577 aaKnown RBP19.87■□□□□ 0.77
TRAPPC11-202ENST00000357207 RWDD1Q9H446 243 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC11-202ENST00000357207 GOLGA2Q08379 1002 aa19.86■□□□□ 0.77
TRAPPC11-202ENST00000357207 ZRSR1Q15695 479 aaKnown RBP19.86■□□□□ 0.77
TRAPPC11-202ENST00000357207 GZF1Q9H116 711 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC11-202ENST00000357207 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC11-202ENST00000357207 PDE4AP27815 886 aa19.85■□□□□ 0.77
TRAPPC11-202ENST00000357207 FHOD3Q2V2M9 1422 aa19.84■□□□□ 0.77
TRAPPC11-202ENST00000357207 C14orf37Q86TY3 774 aa19.83■□□□□ 0.77
TRAPPC11-202ENST00000357207 GBP4Q96PP9 640 aa19.83■□□□□ 0.76
TRAPPC11-202ENST00000357207 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
TRAPPC11-202ENST00000357207 ANKRD30AQ9BXX3 1397 aa19.82■□□□□ 0.76
TRAPPC11-202ENST00000357207 IPO8O15397 1037 aaKnown RBP19.82■□□□□ 0.76
TRAPPC11-202ENST00000357207 ZBTB7CA1YPR0 619 aa19.8■□□□□ 0.76
TRAPPC11-202ENST00000357207 PMFBP1Q8TBY8 1022 aa19.8■□□□□ 0.76
TRAPPC11-202ENST00000357207 CFAP44Q96MT7 982 aa19.8■□□□□ 0.76
TRAPPC11-202ENST00000357207 MYBBP1AQ9BQG0 1328 aaKnown RBP19.78■□□□□ 0.76
TRAPPC11-202ENST00000357207 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
TRAPPC11-202ENST00000357207 EXOC6Q8TAG9 804 aa19.78■□□□□ 0.76
TRAPPC11-202ENST00000357207 KIF15Q9NS87 1388 aa19.78■□□□□ 0.76
TRAPPC11-202ENST00000357207 GOLGA6L3A6NEY3 463 aa19.77■□□□□ 0.76
TRAPPC11-202ENST00000357207 U2AF1L5P0DN76 240 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC11-202ENST00000357207 U2AF1Q01081 240 aaKnown RBP eCLIP19.77■□□□□ 0.76
TRAPPC11-202ENST00000357207 KANK1Q14678 1352 aa19.77■□□□□ 0.76
TRAPPC11-202ENST00000357207 ARID4BQ4LE39 1312 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC11-202ENST00000357207 ST20-MTHFSA0A0A6YYL1 179 aa19.76■□□□□ 0.75
TRAPPC11-202ENST00000357207 RRP1P56182 461 aaKnown RBP19.76■□□□□ 0.75
TRAPPC11-202ENST00000357207 PHLDB1Q86UU1 1377 aa19.76■□□□□ 0.75
TRAPPC11-202ENST00000357207 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
TRAPPC11-202ENST00000357207 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
TRAPPC11-202ENST00000357207 PTMSP20962 102 aa19.75■□□□□ 0.75
TRAPPC11-202ENST00000357207 HAP1P54257 671 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC11-202ENST00000357207 ITPRIPQ8IWB1 547 aa19.73■□□□□ 0.75
TRAPPC11-202ENST00000357207 MFAP1P55081 439 aaKnown RBP19.73■□□□□ 0.75
TRAPPC11-202ENST00000357207 CENPQQ7L2Z9 268 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC11-202ENST00000357207 GSE1Q14687 1217 aa19.73■□□□□ 0.75
TRAPPC11-202ENST00000357207 MCCP23508 829 aa19.72■□□□□ 0.75
TRAPPC11-202ENST00000357207 CLUAP1Q96AJ1 413 aa19.72■□□□□ 0.75
TRAPPC11-202ENST00000357207 KCNJ4P48050 445 aa19.72■□□□□ 0.75
TRAPPC11-202ENST00000357207 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
TRAPPC11-202ENST00000357207 PLIN1O60240 522 aa19.71■□□□□ 0.75
TRAPPC11-202ENST00000357207 CHAF1AQ13111 956 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC11-202ENST00000357207 SLC4A3P48751 1232 aa19.71■□□□□ 0.75
TRAPPC11-202ENST00000357207 CENPJQ9HC77 1338 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC11-202ENST00000357207 GOLGA6L4A6NEF3 574 aa19.71■□□□□ 0.75
TRAPPC11-202ENST00000357207 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
TRAPPC11-202ENST00000357207 OS9Q13438 667 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC11-202ENST00000357207 CCDC146Q8IYE0 955 aa19.71■□□□□ 0.75
TRAPPC11-202ENST00000357207 CCDC18Q5T9S5 1454 aa19.7■□□□□ 0.74
TRAPPC11-202ENST00000357207 FGD1P98174 961 aa19.68■□□□□ 0.74
TRAPPC11-202ENST00000357207 SMC4Q9NTJ3 1288 aa19.67■□□□□ 0.74
TRAPPC11-202ENST00000357207 APBB1O00213 710 aa19.67■□□□□ 0.74
TRAPPC11-202ENST00000357207 CRBNQ96SW2 442 aa19.67■□□□□ 0.74
TRAPPC11-202ENST00000357207 NRDCO43847 1150 aa19.66■□□□□ 0.74
TRAPPC11-202ENST00000357207 PANK3Q9H999 370 aa19.65■□□□□ 0.74
TRAPPC11-202ENST00000357207 CARMIL2Q6F5E8 1435 aa19.65■□□□□ 0.74
TRAPPC11-202ENST00000357207 USP47Q96K76 1375 aa19.65■□□□□ 0.74
TRAPPC11-202ENST00000357207 GOLGA6L6A8MZA4 724 aa19.64■□□□□ 0.73
TRAPPC11-202ENST00000357207 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
TRAPPC11-202ENST00000357207 HNRNPMP52272 730 aaKnown RBP eCLIP19.62■□□□□ 0.73
TRAPPC11-202ENST00000357207 KIAA2012Q0VF49 1180 aa19.62■□□□□ 0.73
TRAPPC11-202ENST00000357207 HDGFL2Q7Z4V5 671 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC11-202ENST00000357207 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
TRAPPC11-202ENST00000357207 CCDC7Q96M83 1385 aa19.6■□□□□ 0.73
TRAPPC11-202ENST00000357207 STK26Q9P289 416 aa19.6■□□□□ 0.73
TRAPPC11-202ENST00000357207 EIF3AQ14152 1382 aaKnown RBP19.6■□□□□ 0.73
TRAPPC11-202ENST00000357207 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
TRAPPC11-202ENST00000357207 ATAD2BQ9ULI0 1458 aa19.6■□□□□ 0.73
TRAPPC11-202ENST00000357207 EFCAB2Q5VUJ9 269 aa19.6■□□□□ 0.73
TRAPPC11-202ENST00000357207 RSPH4AQ5TD94 716 aa19.59■□□□□ 0.73
TRAPPC11-202ENST00000357207 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
TRAPPC11-202ENST00000357207 GGT6Q6P531 493 aa19.59■□□□□ 0.73
TRAPPC11-202ENST00000357207 RSPH6AQ9H0K4 717 aa19.59■□□□□ 0.73
TRAPPC11-202ENST00000357207 CGNL1Q0VF96 1302 aa19.58■□□□□ 0.73
TRAPPC11-202ENST00000357207 KIF7Q2M1P5 1343 aa19.57■□□□□ 0.72
TRAPPC11-202ENST00000357207 DRC7Q8IY82 874 aa19.57■□□□□ 0.72
TRAPPC11-202ENST00000357207 KIF21BO75037 1637 aa19.57■□□□□ 0.72
TRAPPC11-202ENST00000357207 SYAP1Q96A49 352 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC11-202ENST00000357207 SOX12O15370 315 aa19.56■□□□□ 0.72
TRAPPC11-202ENST00000357207 E9PSI1 815 aa19.56■□□□□ 0.72
TRAPPC11-202ENST00000357207 KIAA1211Q6ZU35 1233 aa19.56■□□□□ 0.72
TRAPPC11-202ENST00000357207 NAP1L2Q9ULW6 460 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC11-202ENST00000357207 RTF1Q92541 710 aaKnown RBP19.55■□□□□ 0.72
TRAPPC11-202ENST00000357207 A0A0G2JS52 829 aa19.55■□□□□ 0.72
TRAPPC11-202ENST00000357207 DDX11L8A8MPP1 907 aa19.55■□□□□ 0.72
TRAPPC11-202ENST00000357207 WASHC2AQ641Q2 1341 aa19.55■□□□□ 0.72
TRAPPC11-202ENST00000357207 UACAQ9BZF9 1416 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms