RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 RRP7BPQ9NSQ0 103 aa37.7■■■■□ 3.63
CLK2-201ENST00000355560 UHRF1BP1LA0JNW5 1464 aa37.68■■■■□ 3.62
CLK2-201ENST00000355560 ZNF777Q9ULD5 760 aaPredicted RBP37.64■■■■□ 3.62
CLK2-201ENST00000355560 ZCCHC11Q5TAX3 1644 aaKnown RBP37.62■■■■□ 3.61
CLK2-201ENST00000355560 ROCK1Q13464 1354 aa37.61■■■■□ 3.61
CLK2-201ENST00000355560 OSCARQ8IYS5 282 aa37.6■■■■□ 3.61
CLK2-201ENST00000355560 KDM5BQ9UGL1 1544 aa37.58■■■■□ 3.61
CLK2-201ENST00000355560 CROCC2H7BZ55 1655 aa37.56■■■■□ 3.6
CLK2-201ENST00000355560 KDM6BO15054 1643 aa37.55■■■■□ 3.6
CLK2-201ENST00000355560 PREX2Q70Z35 1606 aa37.54■■■■□ 3.6
CLK2-201ENST00000355560 TTC37Q6PGP7 1564 aa37.52■■■■□ 3.6
CLK2-201ENST00000355560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.51■■■■□ 3.597e-15■■□□□ 14.1
CLK2-201ENST00000355560 CDC42BPBQ9Y5S2 1711 aa37.51■■■■□ 3.59
CLK2-201ENST00000355560 ADGBQ8N7X0 1667 aa37.5■■■■□ 3.59
CLK2-201ENST00000355560 ZNF316A6NFI3 1004 aaPredicted RBP37.42■■■■□ 3.58
CLK2-201ENST00000355560 ADGRL2O95490 1459 aa37.42■■■■□ 3.58
CLK2-201ENST00000355560 SIN3AQ96ST3 1273 aa37.42■■■■□ 3.58
CLK2-201ENST00000355560 SAMD9LQ8IVG5 1584 aa37.41■■■■□ 3.58
CLK2-201ENST00000355560 MYO5CQ9NQX4 1742 aa37.41■■■■□ 3.58
CLK2-201ENST00000355560 NCOA1Q15788 1441 aa37.4■■■■□ 3.58
CLK2-201ENST00000355560 KCNH8Q96L42 1107 aa37.39■■■■□ 3.58
CLK2-201ENST00000355560 SHANK2Q9UPX8 1470 aa37.38■■■■□ 3.58
CLK2-201ENST00000355560 ARHGAP5Q13017 1502 aa37.37■■■■□ 3.57
CLK2-201ENST00000355560 TRIM52Q96A61 297 aa37.37■■■■□ 3.57
CLK2-201ENST00000355560 ARHGEF5Q12774 1597 aa37.37■■■■□ 3.57
CLK2-201ENST00000355560 NEUROD1Q13562 356 aa37.36■■■■□ 3.57
CLK2-201ENST00000355560 ANKRD30AQ9BXX3 1397 aa37.33■■■■□ 3.57
CLK2-201ENST00000355560 MBD5Q9P267 1494 aa37.33■■■■□ 3.57
CLK2-201ENST00000355560 C9orf84Q5VXU9 1444 aa37.32■■■■□ 3.57
CLK2-201ENST00000355560 ACIN1Q9UKV3 1341 aaKnown RBP37.3■■■■□ 3.56
CLK2-201ENST00000355560 HNRNPMP52272 730 aaKnown RBP eCLIP37.3■■■■□ 3.56
CLK2-201ENST00000355560 DENND4BO75064 1496 aaPredicted RBP37.28■■■■□ 3.56
CLK2-201ENST00000355560 CCDC141Q6ZP82 1450 aa37.27■■■■□ 3.56
CLK2-201ENST00000355560 SYCP2Q9BX26 1530 aa37.26■■■■□ 3.55
CLK2-201ENST00000355560 WDR7Q9Y4E6 1490 aa37.25■■■■□ 3.55
CLK2-201ENST00000355560 TSPY4P0CV99 314 aa37.25■■■■□ 3.55
CLK2-201ENST00000355560 TSPY10P0CW01 314 aa37.25■■■■□ 3.55
CLK2-201ENST00000355560 TIMELESSQ9UNS1 1208 aa37.25■■■■□ 3.55
CLK2-201ENST00000355560 PLCH2O75038 1416 aa37.22■■■■□ 3.55
CLK2-201ENST00000355560 MPHOSPH9Q99550 1183 aa37.22■■■■□ 3.55
CLK2-201ENST00000355560 DIEXFQ68CQ4 756 aaKnown RBP37.2■■■■□ 3.55
CLK2-201ENST00000355560 RSPH4AQ5TD94 716 aa37.19■■■■□ 3.54
CLK2-201ENST00000355560 PLEKHH2Q8IVE3 1493 aa37.19■■■■□ 3.54
CLK2-201ENST00000355560 ANKRD50Q9ULJ7 1429 aa37.18■■■■□ 3.54
CLK2-201ENST00000355560 KIAA1107Q9UPP5 1409 aa37.15■■■■□ 3.54
CLK2-201ENST00000355560 TONSLQ96HA7 1378 aa37.12■■■■□ 3.53
CLK2-201ENST00000355560 ASXL2Q76L83 1435 aa37.11■■■■□ 3.53
CLK2-201ENST00000355560 KIF15Q9NS87 1388 aa37.11■■■■□ 3.53
CLK2-201ENST00000355560 EFCAB2Q5VUJ9 269 aa37.09■■■■□ 3.53
CLK2-201ENST00000355560 ARAP3Q8WWN8 1544 aa37.09■■■■□ 3.53
CLK2-201ENST00000355560 MAST1Q9Y2H9 1570 aa37.09■■■■□ 3.53
CLK2-201ENST00000355560 ARHGEF12Q9NZN5 1544 aa37.07■■■■□ 3.52
CLK2-201ENST00000355560 ABCA9Q8IUA7 1624 aa37.06■■■■□ 3.52
CLK2-201ENST00000355560 PZPP20742 1482 aa37.06■■■■□ 3.52
CLK2-201ENST00000355560 SLC4A1APQ9BWU0 796 aaKnown RBP37.06■■■■□ 3.52
CLK2-201ENST00000355560 ABCC1P33527 1531 aa37.06■■■■□ 3.52
CLK2-201ENST00000355560 NPM1P06748 294 aaKnown RBP eCLIP37.03■■■■□ 3.52
CLK2-201ENST00000355560 FOXD1Q16676 465 aa37.03■■■■□ 3.52
CLK2-201ENST00000355560 PPP1R15AO75807 674 aaPredicted RBP37.01■■■■□ 3.52
CLK2-201ENST00000355560 PLXNC1O60486 1568 aa36.97■■■■□ 3.51
CLK2-201ENST00000355560 ANKRD30BQ9BXX2 1392 aa36.96■■■■□ 3.51
CLK2-201ENST00000355560 FANCAO15360 1455 aa36.92■■■■□ 3.5
CLK2-201ENST00000355560 KDM5DQ9BY66 1539 aa36.91■■■■□ 3.5
CLK2-201ENST00000355560 TRAPPC8Q9Y2L5 1435 aa36.91■■■■□ 3.5
CLK2-201ENST00000355560 NUP155O75694 1391 aa36.9■■■■□ 3.5
CLK2-201ENST00000355560 RPRD2Q5VT52 1461 aaKnown RBP36.85■■■■□ 3.49
CLK2-201ENST00000355560 PKD2Q13563 968 aa36.82■■■■□ 3.48
CLK2-201ENST00000355560 DUOX2Q9NRD8 1548 aa36.81■■■■□ 3.48
CLK2-201ENST00000355560 ADGRL1O94910 1474 aa36.77■■■■□ 3.48
CLK2-201ENST00000355560 RIMBP3CA6NJZ7 1639 aa36.77■■■■□ 3.48
CLK2-201ENST00000355560 RIMBP3BA6NNM3 1639 aa36.77■■■■□ 3.48
CLK2-201ENST00000355560 RIMBP3Q9UFD9 1639 aa36.77■■■■□ 3.48
CLK2-201ENST00000355560 UNC13BO14795 1591 aa36.77■■■■□ 3.48
CLK2-201ENST00000355560 ZFYVE16Q7Z3T8 1539 aa36.76■■■■□ 3.47
CLK2-201ENST00000355560 AFAP1Q8N556 730 aa36.75■■■■□ 3.47
CLK2-201ENST00000355560 SPAG9O60271 1321 aaKnown RBP36.74■■■■□ 3.47
CLK2-201ENST00000355560 ERBINQ96RT1 1412 aa36.74■■■■□ 3.47
CLK2-201ENST00000355560 FAM135AQ9P2D6 1515 aa36.74■■■■□ 3.47
CLK2-201ENST00000355560 RTEL1-TNFRSF6BF6WH68 1400 aa36.73■■■■□ 3.47
CLK2-201ENST00000355560 TEX14Q8IWB6 1497 aa36.71■■■■□ 3.47
CLK2-201ENST00000355560 SCAPERQ9BY12 1400 aa36.7■■■■□ 3.47
CLK2-201ENST00000355560 CYB5RLQ6IPT4 315 aa36.7■■■■□ 3.47
CLK2-201ENST00000355560 L3MBTL2Q969R5 705 aa36.7■■■■□ 3.47
CLK2-201ENST00000355560 CD109Q6YHK3 1445 aa36.69■■■■□ 3.46
CLK2-201ENST00000355560 INO80Q9ULG1 1556 aaPredicted RBP36.67■■■■□ 3.46
CLK2-201ENST00000355560 ATP7AQ04656 1500 aa36.65■■■■□ 3.46
CLK2-201ENST00000355560 CFAP74Q9C0B2 1584 aa36.64■■■■□ 3.46
CLK2-201ENST00000355560 IQGAP3Q86VI3 1631 aa36.62■■■■□ 3.45
CLK2-201ENST00000355560 MAGI2Q86UL8 1455 aa36.62■■■■□ 3.45
CLK2-201ENST00000355560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.59■■■■□ 3.452e-7■■■□□ 15
CLK2-201ENST00000355560 MIER1Q8N108 512 aa36.55■■■■□ 3.44
CLK2-201ENST00000355560 ZNF518AQ6AHZ1 1483 aa36.54■■■■□ 3.44
CLK2-201ENST00000355560 HIRIP3Q9BW71 556 aaPredicted RBP36.52■■■■□ 3.44
CLK2-201ENST00000355560 MYT1LQ9UL68 1186 aa36.5■■■■□ 3.43
CLK2-201ENST00000355560 KIDINS220Q9ULH0 1771 aa36.47■■■■□ 3.43
CLK2-201ENST00000355560 POGZQ7Z3K3 1410 aa36.46■■■■□ 3.43
CLK2-201ENST00000355560 DEPDC5O75140 1603 aa36.44■■■■□ 3.42
CLK2-201ENST00000355560 MAP3K4Q9Y6R4 1608 aa36.44■■■■□ 3.42
CLK2-201ENST00000355560 NEO1Q92859 1461 aa36.44■■■■□ 3.42
CLK2-201ENST00000355560 KDM5CP41229 1560 aa36.44■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms