RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
RNF220-202ENST00000355387 RRP7BPQ9NSQ0 103 aa18.1■□□□□ 0.49
RNF220-202ENST00000355387 NCOA1Q15788 1441 aa18.1■□□□□ 0.49
RNF220-202ENST00000355387 MAGI1Q96QZ7 1491 aaPredicted RBP18.1■□□□□ 0.49
RNF220-202ENST00000355387 ADGRL2O95490 1459 aa18.09■□□□□ 0.49
RNF220-202ENST00000355387 HIRIP3Q9BW71 556 aaPredicted RBP18.09■□□□□ 0.49
RNF220-202ENST00000355387 EIF4G2P78344 907 aaKnown RBP eCLIP18.08■□□□□ 0.48
RNF220-202ENST00000355387 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
RNF220-202ENST00000355387 WASHC2AQ641Q2 1341 aa18.07■□□□□ 0.48
RNF220-202ENST00000355387 FKBP8Q14318 412 aa18.07■□□□□ 0.48
RNF220-202ENST00000355387 TROQ12816 1431 aaPredicted RBP18.07■□□□□ 0.48
RNF220-202ENST00000355387 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
RNF220-202ENST00000355387 CDK11AQ9UQ88 783 aaPredicted RBP18.06■□□□□ 0.48
RNF220-202ENST00000355387 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
RNF220-202ENST00000355387 TRIM52Q96A61 297 aa18.04■□□□□ 0.48
RNF220-202ENST00000355387 CHIC2Q9UKJ5 165 aa18.03■□□□□ 0.48
RNF220-202ENST00000355387 CAMSAP2Q08AD1 1489 aa18.03■□□□□ 0.48
RNF220-202ENST00000355387 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
RNF220-202ENST00000355387 MBD5Q9P267 1494 aa18.02■□□□□ 0.48
RNF220-202ENST00000355387 CCDC7Q96M83 1385 aa18.01■□□□□ 0.47
RNF220-202ENST00000355387 PZPP20742 1482 aa18.01■□□□□ 0.47
RNF220-202ENST00000355387 CEP170Q5SW79 1584 aa18■□□□□ 0.47
RNF220-202ENST00000355387 ERICH6BQ5W0A0 696 aa18■□□□□ 0.47
RNF220-202ENST00000355387 SYNJ2O15056 1496 aa18■□□□□ 0.47
RNF220-202ENST00000355387 L3MBTL2Q969R5 705 aa18■□□□□ 0.47
RNF220-202ENST00000355387 SHANK2Q9UPX8 1470 aa17.99■□□□□ 0.47
RNF220-202ENST00000355387 KIF14Q15058 1648 aa17.99■□□□□ 0.47
RNF220-202ENST00000355387 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
RNF220-202ENST00000355387 NUP160Q12769 1436 aa17.96■□□□□ 0.47
RNF220-202ENST00000355387 KDM5DQ9BY66 1539 aa17.96■□□□□ 0.47
RNF220-202ENST00000355387 CDC42BPAQ5VT25 1732 aa17.95■□□□□ 0.46
RNF220-202ENST00000355387 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
RNF220-202ENST00000355387 ABCA8O94911 1581 aa17.94■□□□□ 0.46
RNF220-202ENST00000355387 CARMIL2Q6F5E8 1435 aa17.94■□□□□ 0.46
RNF220-202ENST00000355387 ANP32EQ9BTT0 268 aa17.94■□□□□ 0.46
RNF220-202ENST00000355387 ARHGEF12Q9NZN5 1544 aa17.92■□□□□ 0.46
RNF220-202ENST00000355387 PRG4Q92954 1404 aaPredicted RBP17.92■□□□□ 0.46
RNF220-202ENST00000355387 ARID4BQ4LE39 1312 aaPredicted RBP17.91■□□□□ 0.46
RNF220-202ENST00000355387 PRKRIP1Q9H875 184 aaPredicted RBP17.9■□□□□ 0.46
RNF220-202ENST00000355387 ARHGEF5Q12774 1597 aa17.9■□□□□ 0.46
RNF220-202ENST00000355387 UHRF1BP1Q6BDS2 1440 aa17.9■□□□□ 0.46
RNF220-202ENST00000355387 HNRNPUQ00839 825 aaKnown RBP eCLIP17.9■□□□□ 0.46
RNF220-202ENST00000355387 KDM5CP41229 1560 aa17.89■□□□□ 0.46
RNF220-202ENST00000355387 ANKRD30AQ9BXX3 1397 aa17.89■□□□□ 0.46
RNF220-202ENST00000355387 ABCC10Q5T3U5 1492 aa17.89■□□□□ 0.45
RNF220-202ENST00000355387 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
RNF220-202ENST00000355387 NBPF8Q3BBV2 869 aa17.89■□□□□ 0.45
RNF220-202ENST00000355387 BCANQ96GW7 911 aa17.89■□□□□ 0.45
RNF220-202ENST00000355387 PLB1Q6P1J6 1458 aa17.88■□□□□ 0.45
RNF220-202ENST00000355387 ZNF644Q9H582 1327 aaPredicted RBP17.87■□□□□ 0.45
RNF220-202ENST00000355387 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
RNF220-202ENST00000355387 CFDP1Q9UEE9 299 aaPredicted RBP17.86■□□□□ 0.45
RNF220-202ENST00000355387 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
RNF220-202ENST00000355387 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
RNF220-202ENST00000355387 C11orf95C9JLR9 678 aaPredicted RBP17.84■□□□□ 0.45
RNF220-202ENST00000355387 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
RNF220-202ENST00000355387 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.44
RNF220-202ENST00000355387 FOXD1Q16676 465 aa17.83■□□□□ 0.44
RNF220-202ENST00000355387 PTPRGP23470 1445 aa17.82■□□□□ 0.44
RNF220-202ENST00000355387 ROCK2O75116 1388 aaKnown RBP17.81■□□□□ 0.44
RNF220-202ENST00000355387 RBM19Q9Y4C8 960 aaKnown RBP17.8■□□□□ 0.44
RNF220-202ENST00000355387 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
RNF220-202ENST00000355387 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
RNF220-202ENST00000355387 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
RNF220-202ENST00000355387 ARID3CA6NKF2 412 aa17.79■□□□□ 0.44
RNF220-202ENST00000355387 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
RNF220-202ENST00000355387 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
RNF220-202ENST00000355387 ATP10BO94823 1461 aa17.78■□□□□ 0.44
RNF220-202ENST00000355387 E9PCH4 1651 aa17.78■□□□□ 0.44
RNF220-202ENST00000355387 USP47Q96K76 1375 aa17.77■□□□□ 0.44
RNF220-202ENST00000355387 MAST1Q9Y2H9 1570 aa17.77■□□□□ 0.43
RNF220-202ENST00000355387 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
RNF220-202ENST00000355387 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
RNF220-202ENST00000355387 PPP4R2Q9NY27 417 aa17.75■□□□□ 0.43
RNF220-202ENST00000355387 KTN1Q86UP2 1357 aaKnown RBP17.75■□□□□ 0.43
RNF220-202ENST00000355387 CCDC184Q52MB2 194 aa17.74■□□□□ 0.43
RNF220-202ENST00000355387 LAMC1P11047 1609 aa17.73■□□□□ 0.43
RNF220-202ENST00000355387 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
RNF220-202ENST00000355387 CDC42BPBQ9Y5S2 1711 aa17.73■□□□□ 0.43
RNF220-202ENST00000355387 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
RNF220-202ENST00000355387 UNC13BO14795 1591 aa17.72■□□□□ 0.43
RNF220-202ENST00000355387 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
RNF220-202ENST00000355387 PKD2Q13563 968 aa17.72■□□□□ 0.43
RNF220-202ENST00000355387 CCDC141Q6ZP82 1450 aa17.71■□□□□ 0.42
RNF220-202ENST00000355387 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
RNF220-202ENST00000355387 RSPH4AQ5TD94 716 aa17.69■□□□□ 0.42
RNF220-202ENST00000355387 TRPM1Q7Z4N2 1603 aa17.68■□□□□ 0.42
RNF220-202ENST00000355387 PLXNC1O60486 1568 aa17.68■□□□□ 0.42
RNF220-202ENST00000355387 NUP155O75694 1391 aa17.68■□□□□ 0.42
RNF220-202ENST00000355387 SHROOM2Q13796 1616 aa17.67■□□□□ 0.42
RNF220-202ENST00000355387 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
RNF220-202ENST00000355387 KIF15Q9NS87 1388 aa17.66■□□□□ 0.42
RNF220-202ENST00000355387 FAM135AQ9P2D6 1515 aa17.66■□□□□ 0.42
RNF220-202ENST00000355387 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
RNF220-202ENST00000355387 FAM9BQ8IZU0 186 aa17.66■□□□□ 0.42
RNF220-202ENST00000355387 IQGAP3Q86VI3 1631 aa17.64■□□□□ 0.41
RNF220-202ENST00000355387 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
RNF220-202ENST00000355387 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
RNF220-202ENST00000355387 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.41
RNF220-202ENST00000355387 EIF2AK4Q9P2K8 1649 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms