RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 ST18O60284 1047 aa11.86□□□□□ -0.51
C11orf54-202ENST00000354421 TRPC6Q9Y210 931 aa11.85□□□□□ -0.51
C11orf54-202ENST00000354421 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
C11orf54-202ENST00000354421 EIF4G3O43432 1585 aaKnown RBP11.82□□□□□ -0.52
C11orf54-202ENST00000354421 POTEFA5A3E0 1075 aa11.81□□□□□ -0.52
C11orf54-202ENST00000354421 SEC24BO95487 1268 aa11.81□□□□□ -0.52
C11orf54-202ENST00000354421 IER5LQ5T953 404 aa11.8□□□□□ -0.52
C11orf54-202ENST00000354421 PCDHB13Q9Y5F0 798 aa11.79□□□□□ -0.52
C11orf54-202ENST00000354421 ABCC10Q5T3U5 1492 aa11.79□□□□□ -0.52
C11orf54-202ENST00000354421 NUBP1P53384 320 aa11.75□□□□□ -0.53
C11orf54-202ENST00000354421 TMEM121BQ9BXQ6 578 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-202ENST00000354421 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
C11orf54-202ENST00000354421 FAM212AQ96EL1 285 aa11.74□□□□□ -0.53
C11orf54-202ENST00000354421 TRIM35Q9UPQ4 493 aa11.74□□□□□ -0.53
C11orf54-202ENST00000354421 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.53
C11orf54-202ENST00000354421 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
C11orf54-202ENST00000354421 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
C11orf54-202ENST00000354421 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
C11orf54-202ENST00000354421 SLAIN1Q8ND83 568 aa11.69□□□□□ -0.54
C11orf54-202ENST00000354421 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
C11orf54-202ENST00000354421 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
C11orf54-202ENST00000354421 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
C11orf54-202ENST00000354421 DIP2BQ9P265 1576 aa11.65□□□□□ -0.54
C11orf54-202ENST00000354421 PLCG2P16885 1265 aa11.63□□□□□ -0.55
C11orf54-202ENST00000354421 FKBP8Q14318 412 aa11.62□□□□□ -0.55
C11orf54-202ENST00000354421 CFTRP13569 1480 aa11.59□□□□□ -0.55
C11orf54-202ENST00000354421 SNPHO15079 494 aa11.58□□□□□ -0.56
C11orf54-202ENST00000354421 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
C11orf54-202ENST00000354421 TSPOAP1O95153 1857 aa11.58□□□□□ -0.56
C11orf54-202ENST00000354421 DCAF8Q5TAQ9 597 aa11.57□□□□□ -0.56
C11orf54-202ENST00000354421 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-202ENST00000354421 PCF11O94913 1555 aaKnown RBP11.57□□□□□ -0.56
C11orf54-202ENST00000354421 MAPKBP1O60336 1514 aa11.56□□□□□ -0.56
C11orf54-202ENST00000354421 SNAPC4Q5SXM2 1469 aa11.54□□□□□ -0.56
C11orf54-202ENST00000354421 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
C11orf54-202ENST00000354421 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
C11orf54-202ENST00000354421 PYGBP11216 843 aa11.5□□□□□ -0.57
C11orf54-202ENST00000354421 MYT1Q01538 1121 aa11.5□□□□□ -0.57
C11orf54-202ENST00000354421 ACIN1Q9UKV3 1341 aaKnown RBP11.5□□□□□ -0.57
C11orf54-202ENST00000354421 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
C11orf54-202ENST00000354421 TARBP1Q13395 1621 aaKnown RBP11.5□□□□□ -0.57
C11orf54-202ENST00000354421 FAM9AQ8IZU1 332 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-202ENST00000354421 MARVELD3Q96A59 401 aa11.49□□□□□ -0.57
C11orf54-202ENST00000354421 COL17A1Q9UMD9 1497 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-202ENST00000354421 MROH2BQ7Z745 1585 aa11.47□□□□□ -0.57
C11orf54-202ENST00000354421 PTPRMP28827 1452 aa11.47□□□□□ -0.57
C11orf54-202ENST00000354421 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
C11orf54-202ENST00000354421 MAGI1Q96QZ7 1491 aaPredicted RBP11.46□□□□□ -0.57
C11orf54-202ENST00000354421 GSE1Q14687 1217 aa11.46□□□□□ -0.58
C11orf54-202ENST00000354421 MED1Q15648 1581 aaPredicted RBP11.45□□□□□ -0.58
C11orf54-202ENST00000354421 HSPA2P54652 639 aa11.45□□□□□ -0.58
C11orf54-202ENST00000354421 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
C11orf54-202ENST00000354421 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
C11orf54-202ENST00000354421 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
C11orf54-202ENST00000354421 KRTAP3-2Q9BYR7 98 aa11.43□□□□□ -0.58
C11orf54-202ENST00000354421 ABCC8Q09428 1581 aa11.42□□□□□ -0.58
C11orf54-202ENST00000354421 NEUROD1Q13562 356 aa11.41□□□□□ -0.58
C11orf54-202ENST00000354421 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
C11orf54-202ENST00000354421 CEP170Q5SW79 1584 aa11.4□□□□□ -0.58
C11orf54-202ENST00000354421 WRNQ14191 1432 aaPredicted RBP eCLIP11.4□□□□□ -0.58
C11orf54-202ENST00000354421 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
C11orf54-202ENST00000354421 CENPBP07199 599 aaPredicted RBP11.39□□□□□ -0.59
C11orf54-202ENST00000354421 EMP3P54852 163 aa11.39□□□□□ -0.59
C11orf54-202ENST00000354421 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
C11orf54-202ENST00000354421 CCER1Q8TC90 406 aaPredicted RBP11.39□□□□□ -0.59
C11orf54-202ENST00000354421 L3MBTL3Q96JM7 780 aaPredicted RBP11.38□□□□□ -0.59
C11orf54-202ENST00000354421 CHRM1P11229 460 aaPredicted RBP11.38□□□□□ -0.59
C11orf54-202ENST00000354421 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
C11orf54-202ENST00000354421 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
C11orf54-202ENST00000354421 WIZO95785 1651 aa11.35□□□□□ -0.59
C11orf54-202ENST00000354421 PPRC1Q5VV67 1664 aaKnown RBP11.35□□□□□ -0.59
C11orf54-202ENST00000354421 DIEXFQ68CQ4 756 aaKnown RBP11.35□□□□□ -0.59
C11orf54-202ENST00000354421 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
C11orf54-202ENST00000354421 IQSEC2Q5JU85 1478 aa11.34□□□□□ -0.59
C11orf54-202ENST00000354421 PDCD7Q8N8D1 485 aaKnown RBP11.33□□□□□ -0.6
C11orf54-202ENST00000354421 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
C11orf54-202ENST00000354421 GTF3C3Q9Y5Q9 886 aa11.32□□□□□ -0.6
C11orf54-202ENST00000354421 GRIN2BQ13224 1484 aa11.31□□□□□ -0.6
C11orf54-202ENST00000354421 RNF166Q96A37 237 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-202ENST00000354421 DNMBPQ6XZF7 1577 aa11.3□□□□□ -0.6
C11orf54-202ENST00000354421 WDR97A6NE52 1622 aa11.3□□□□□ -0.6
C11orf54-202ENST00000354421 PSEN1P49768 467 aa11.29□□□□□ -0.6
C11orf54-202ENST00000354421 ADAMTSL3P82987 1691 aa11.29□□□□□ -0.6
C11orf54-202ENST00000354421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.68e-7■■■□□ 14.9
C11orf54-202ENST00000354421 SHROOM2Q13796 1616 aa11.27□□□□□ -0.6
C11orf54-202ENST00000354421 POLA1P09884 1462 aaPredicted RBP11.27□□□□□ -0.61
C11orf54-202ENST00000354421 RAD54L2Q9Y4B4 1467 aa11.26□□□□□ -0.61
C11orf54-202ENST00000354421 TNIKQ9UKE5 1360 aa11.26□□□□□ -0.61
C11orf54-202ENST00000354421 GLI2P10070 1586 aa11.25□□□□□ -0.61
C11orf54-202ENST00000354421 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
C11orf54-202ENST00000354421 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
C11orf54-202ENST00000354421 CEP162Q5TB80 1403 aa11.25□□□□□ -0.61
C11orf54-202ENST00000354421 TOP2AP11388 1531 aaKnown RBP11.24□□□□□ -0.61
C11orf54-202ENST00000354421 ADCY10Q96PN6 1610 aa11.24□□□□□ -0.61
C11orf54-202ENST00000354421 SOGA1O94964 1423 aa11.24□□□□□ -0.61
C11orf54-202ENST00000354421 EEA1Q15075 1411 aa11.24□□□□□ -0.61
C11orf54-202ENST00000354421 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
C11orf54-202ENST00000354421 UBAP1LF5GYI3 381 aa11.23□□□□□ -0.61
C11orf54-202ENST00000354421 KIF21BO75037 1637 aa11.23□□□□□ -0.61
C11orf54-202ENST00000354421 TEX14Q8IWB6 1497 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms