RNA–Protein interactions for RNA: ENST00000351986.10

NPM1-202, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-202ENST00000351986 GPR153Q6NV75 609 aa13.35□□□□□ -0.27
NPM1-202ENST00000351986 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.287e-7■■■■□ 24.8
NPM1-202ENST00000351986 ARSIQ5FYB1 569 aa13.31□□□□□ -0.28
NPM1-202ENST00000351986 BCL11BQ9C0K0 894 aaPredicted RBP13.31□□□□□ -0.28
NPM1-202ENST00000351986 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
NPM1-202ENST00000351986 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
NPM1-202ENST00000351986 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
NPM1-202ENST00000351986 NLRP6P59044 892 aa13.26□□□□□ -0.29
NPM1-202ENST00000351986 ZNF687Q8N1G0 1237 aa13.26□□□□□ -0.29
NPM1-202ENST00000351986 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
NPM1-202ENST00000351986 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
NPM1-202ENST00000351986 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
NPM1-202ENST00000351986 STK25O00506 426 aa13.19□□□□□ -0.3
NPM1-202ENST00000351986 C2orf72A6NCS6 295 aa13.16□□□□□ -0.3
NPM1-202ENST00000351986 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
NPM1-202ENST00000351986 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
NPM1-202ENST00000351986 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
NPM1-202ENST00000351986 KIF3CO14782 793 aa13.14□□□□□ -0.31
NPM1-202ENST00000351986 NUDT7P0C024 238 aa13.12□□□□□ -0.31
NPM1-202ENST00000351986 RGL2O15211 777 aa13.11□□□□□ -0.31
NPM1-202ENST00000351986 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
NPM1-202ENST00000351986 PKD2Q13563 968 aa13.07□□□□□ -0.32
NPM1-202ENST00000351986 LSM11P83369 360 aaKnown RBP eCLIP13.06□□□□□ -0.326e-8■■■■■ 28.5
NPM1-202ENST00000351986 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
NPM1-202ENST00000351986 PPP1R37O75864 691 aa13.05□□□□□ -0.32
NPM1-202ENST00000351986 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
NPM1-202ENST00000351986 LHX6Q9UPM6 363 aa13.05□□□□□ -0.32
NPM1-202ENST00000351986 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
NPM1-202ENST00000351986 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
NPM1-202ENST00000351986 PTGER2P43116 358 aa12.98□□□□□ -0.33
NPM1-202ENST00000351986 SLC34A2O95436 690 aa12.96□□□□□ -0.33
NPM1-202ENST00000351986 NISCHQ9Y2I1 1504 aa12.96□□□□□ -0.33
NPM1-202ENST00000351986 PBX2P40425 430 aa12.91□□□□□ -0.34
NPM1-202ENST00000351986 KDM4FA0A1W2PPD8 638 aa12.85□□□□□ -0.35
NPM1-202ENST00000351986 ARHGAP33O14559 1287 aa12.83□□□□□ -0.36
NPM1-202ENST00000351986 PSEN2P49810 448 aa12.83□□□□□ -0.36
NPM1-202ENST00000351986 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
NPM1-202ENST00000351986 ADGRD1Q6QNK2 874 aa12.83□□□□□ -0.36
NPM1-202ENST00000351986 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
NPM1-202ENST00000351986 PTCD2Q8WV60 388 aaKnown RBP12.81□□□□□ -0.36
NPM1-202ENST00000351986 DSG2Q14126 1118 aa12.79□□□□□ -0.36
NPM1-202ENST00000351986 FOXK1P85037 733 aa12.78□□□□□ -0.36
NPM1-202ENST00000351986 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
NPM1-202ENST00000351986 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
NPM1-202ENST00000351986 HS6ST3Q8IZP7 471 aa12.74□□□□□ -0.37
NPM1-202ENST00000351986 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
NPM1-202ENST00000351986 PSDA5PKW4 1024 aaPredicted RBP12.73□□□□□ -0.37
NPM1-202ENST00000351986 HRO43593 1189 aa12.73□□□□□ -0.37
NPM1-202ENST00000351986 CHGAP10645 457 aaKnown RBP12.71□□□□□ -0.37
NPM1-202ENST00000351986 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
NPM1-202ENST00000351986 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
NPM1-202ENST00000351986 TK2O00142 265 aa12.68□□□□□ -0.38
NPM1-202ENST00000351986 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
NPM1-202ENST00000351986 KCTD12Q96CX2 325 aaKnown RBP12.68□□□□□ -0.38
NPM1-202ENST00000351986 KCNK17Q96T54 332 aa12.68□□□□□ -0.38
NPM1-202ENST00000351986 TBC1D12O60347 775 aa12.65□□□□□ -0.38
NPM1-202ENST00000351986 OXER1Q8TDS5 423 aa12.62□□□□□ -0.39
NPM1-202ENST00000351986 ZNF454Q8N9F8 522 aa12.6□□□□□ -0.39
NPM1-202ENST00000351986 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
NPM1-202ENST00000351986 VPS9D1Q9Y2B5 631 aa12.59□□□□□ -0.39
NPM1-202ENST00000351986 CRISPLD2Q9H0B8 497 aa12.57□□□□□ -0.4
NPM1-202ENST00000351986 PTPN5P54829 565 aa12.56□□□□□ -0.4
NPM1-202ENST00000351986 PPP1R15BQ5SWA1 713 aa12.55□□□□□ -0.4
NPM1-202ENST00000351986 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
NPM1-202ENST00000351986 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
NPM1-202ENST00000351986 FOSBP53539 338 aa12.51□□□□□ -0.41
NPM1-202ENST00000351986 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
NPM1-202ENST00000351986 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
NPM1-202ENST00000351986 BHMG1C9JSJ3 638 aaPredicted RBP12.46□□□□□ -0.41
NPM1-202ENST00000351986 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
NPM1-202ENST00000351986 EVI5O60447 810 aa12.45□□□□□ -0.42
NPM1-202ENST00000351986 PTPREP23469 700 aa12.45□□□□□ -0.42
NPM1-202ENST00000351986 ADAM33Q9BZ11 813 aa12.45□□□□□ -0.42
NPM1-202ENST00000351986 PDE4AP27815 886 aa12.44□□□□□ -0.42
NPM1-202ENST00000351986 SLC4A5Q9BY07 1137 aa12.44□□□□□ -0.42
NPM1-202ENST00000351986 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
NPM1-202ENST00000351986 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
NPM1-202ENST00000351986 LARP6Q9BRS8 491 aaKnown RBP12.43□□□□□ -0.42
NPM1-202ENST00000351986 GTPBP6O43824 516 aaPredicted RBP12.42□□□□□ -0.42
NPM1-202ENST00000351986 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
NPM1-202ENST00000351986 WNT2BQ93097 391 aa12.4□□□□□ -0.42
NPM1-202ENST00000351986 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
NPM1-202ENST00000351986 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
NPM1-202ENST00000351986 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
NPM1-202ENST00000351986 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
NPM1-202ENST00000351986 DDX27Q96GQ7 796 aaKnown RBP12.37□□□□□ -0.43
NPM1-202ENST00000351986 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
NPM1-202ENST00000351986 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
NPM1-202ENST00000351986 PROX2Q3B8N5 592 aa12.34□□□□□ -0.43
NPM1-202ENST00000351986 COL9A1P20849 921 aa12.32□□□□□ -0.44
NPM1-202ENST00000351986 PCDHGA10Q9Y5H3 936 aa12.32□□□□□ -0.44
NPM1-202ENST00000351986 MFSD10Q14728 455 aa12.31□□□□□ -0.44
NPM1-202ENST00000351986 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
NPM1-202ENST00000351986 NBPF3Q9H094 633 aa12.29□□□□□ -0.44
NPM1-202ENST00000351986 A0A0G2JS52 829 aa12.28□□□□□ -0.44
NPM1-202ENST00000351986 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
NPM1-202ENST00000351986 PPP1R3GB7ZBB8 358 aa12.26□□□□□ -0.45
NPM1-202ENST00000351986 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
NPM1-202ENST00000351986 BCAMP50895 628 aa12.25□□□□□ -0.45
NPM1-202ENST00000351986 RABGEF1Q9UJ41 708 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms