RNA–Protein interactions for RNA: ENST00000350592.7

C1orf43-201, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-201ENST00000350592 ABCC5O15440 1437 aa24.49■■□□□ 1.51
C1orf43-201ENST00000350592 PREX2Q70Z35 1606 aa24.48■■□□□ 1.51
C1orf43-201ENST00000350592 NAIPQ13075 1403 aa24.47■■□□□ 1.51
C1orf43-201ENST00000350592 TTC37Q6PGP7 1564 aa24.47■■□□□ 1.51
C1orf43-201ENST00000350592 ROCK1Q13464 1354 aa24.45■■□□□ 1.51
C1orf43-201ENST00000350592 ZNF777Q9ULD5 760 aaPredicted RBP24.45■■□□□ 1.5
C1orf43-201ENST00000350592 WDR7Q9Y4E6 1490 aa24.44■■□□□ 1.5
C1orf43-201ENST00000350592 CDC42BPBQ9Y5S2 1711 aa24.44■■□□□ 1.5
C1orf43-201ENST00000350592 GCC2Q8IWJ2 1684 aa24.43■■□□□ 1.5
C1orf43-201ENST00000350592 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
C1orf43-201ENST00000350592 CHIC2Q9UKJ5 165 aa24.42■■□□□ 1.5
C1orf43-201ENST00000350592 MYO5CQ9NQX4 1742 aa24.41■■□□□ 1.5
C1orf43-201ENST00000350592 NPM1P06748 294 aaKnown RBP eCLIP24.39■■□□□ 1.5
C1orf43-201ENST00000350592 CROCC2H7BZ55 1655 aa24.39■■□□□ 1.49
C1orf43-201ENST00000350592 RRP7BPQ9NSQ0 103 aa24.38■■□□□ 1.49
C1orf43-201ENST00000350592 PLCH2O75038 1416 aa24.37■■□□□ 1.49
C1orf43-201ENST00000350592 ASXL2Q76L83 1435 aa24.37■■□□□ 1.49
C1orf43-201ENST00000350592 ARHGEF5Q12774 1597 aa24.37■■□□□ 1.49
C1orf43-201ENST00000350592 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
C1orf43-201ENST00000350592 ARHGAP5Q13017 1502 aa24.37■■□□□ 1.49
C1orf43-201ENST00000350592 SHANK2Q9UPX8 1470 aa24.36■■□□□ 1.49
C1orf43-201ENST00000350592 ADGRL2O95490 1459 aa24.35■■□□□ 1.49
C1orf43-201ENST00000350592 RSPH4AQ5TD94 716 aa24.34■■□□□ 1.49
C1orf43-201ENST00000350592 ARAP3Q8WWN8 1544 aa24.34■■□□□ 1.49
C1orf43-201ENST00000350592 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
C1orf43-201ENST00000350592 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
C1orf43-201ENST00000350592 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
C1orf43-201ENST00000350592 MBD5Q9P267 1494 aa24.33■■□□□ 1.49
C1orf43-201ENST00000350592 ADGBQ8N7X0 1667 aa24.33■■□□□ 1.49
C1orf43-201ENST00000350592 PLEKHH2Q8IVE3 1493 aa24.33■■□□□ 1.49
C1orf43-201ENST00000350592 ACIN1Q9UKV3 1341 aaKnown RBP24.33■■□□□ 1.48
C1orf43-201ENST00000350592 KIAA1107Q9UPP5 1409 aa24.31■■□□□ 1.48
C1orf43-201ENST00000350592 ABCA9Q8IUA7 1624 aa24.3■■□□□ 1.48
C1orf43-201ENST00000350592 NCOA1Q15788 1441 aa24.3■■□□□ 1.48
C1orf43-201ENST00000350592 MAPKBP1O60336 1514 aa24.29■■□□□ 1.48
C1orf43-201ENST00000350592 CCDC141Q6ZP82 1450 aa24.29■■□□□ 1.48
C1orf43-201ENST00000350592 ANKRD30AQ9BXX3 1397 aa24.29■■□□□ 1.48
C1orf43-201ENST00000350592 EFCAB2Q5VUJ9 269 aa24.28■■□□□ 1.48
C1orf43-201ENST00000350592 TSPY4P0CV99 314 aa24.28■■□□□ 1.48
C1orf43-201ENST00000350592 TSPY10P0CW01 314 aa24.28■■□□□ 1.48
C1orf43-201ENST00000350592 HNRNPMP52272 730 aaKnown RBP eCLIP24.28■■□□□ 1.48
C1orf43-201ENST00000350592 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
C1orf43-201ENST00000350592 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
C1orf43-201ENST00000350592 KDM6BO15054 1643 aa24.25■■□□□ 1.47
C1orf43-201ENST00000350592 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
C1orf43-201ENST00000350592 MAST1Q9Y2H9 1570 aa24.21■■□□□ 1.47
C1orf43-201ENST00000350592 ABCC1P33527 1531 aa24.21■■□□□ 1.47
C1orf43-201ENST00000350592 ARHGEF12Q9NZN5 1544 aa24.18■■□□□ 1.46
C1orf43-201ENST00000350592 FANCAO15360 1455 aa24.15■■□□□ 1.46
C1orf43-201ENST00000350592 TRIM52Q96A61 297 aa24.15■■□□□ 1.46
C1orf43-201ENST00000350592 ANKRD50Q9ULJ7 1429 aa24.14■■□□□ 1.46
C1orf43-201ENST00000350592 KIF15Q9NS87 1388 aa24.13■■□□□ 1.45
C1orf43-201ENST00000350592 PLXNC1O60486 1568 aa24.1■■□□□ 1.45
C1orf43-201ENST00000350592 CD109Q6YHK3 1445 aa24.09■■□□□ 1.45
C1orf43-201ENST00000350592 TRAPPC8Q9Y2L5 1435 aa24.09■■□□□ 1.45
C1orf43-201ENST00000350592 MPHOSPH9Q99550 1183 aa24.08■■□□□ 1.45
C1orf43-201ENST00000350592 DENND4BO75064 1496 aaPredicted RBP24.06■■□□□ 1.44
C1orf43-201ENST00000350592 CFAP74Q9C0B2 1584 aa24.06■■□□□ 1.44
C1orf43-201ENST00000350592 TIMELESSQ9UNS1 1208 aa24.06■■□□□ 1.44
C1orf43-201ENST00000350592 ADGRL1O94910 1474 aa24.05■■□□□ 1.44
C1orf43-201ENST00000350592 RTEL1-TNFRSF6BF6WH68 1400 aa24.04■■□□□ 1.44
C1orf43-201ENST00000350592 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
C1orf43-201ENST00000350592 GLI2P10070 1586 aa24.03■■□□□ 1.44
C1orf43-201ENST00000350592 SCAPERQ9BY12 1400 aa24.02■■□□□ 1.44
C1orf43-201ENST00000350592 PZPP20742 1482 aa24.01■■□□□ 1.43
C1orf43-201ENST00000350592 DUOX2Q9NRD8 1548 aa24■■□□□ 1.43
C1orf43-201ENST00000350592 SPAG9O60271 1321 aaKnown RBP24■■□□□ 1.43
C1orf43-201ENST00000350592 KDM5DQ9BY66 1539 aa24■■□□□ 1.43
C1orf43-201ENST00000350592 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
C1orf43-201ENST00000350592 AFAP1Q8N556 730 aa23.99■■□□□ 1.43
C1orf43-201ENST00000350592 MAP3K4Q9Y6R4 1608 aa23.98■■□□□ 1.43
C1orf43-201ENST00000350592 SLC4A1APQ9BWU0 796 aaKnown RBP23.98■■□□□ 1.43
C1orf43-201ENST00000350592 ZFYVE16Q7Z3T8 1539 aa23.98■■□□□ 1.43
C1orf43-201ENST00000350592 NEO1Q92859 1461 aa23.97■■□□□ 1.43
C1orf43-201ENST00000350592 ERBINQ96RT1 1412 aa23.96■■□□□ 1.43
C1orf43-201ENST00000350592 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.42
C1orf43-201ENST00000350592 NUP155O75694 1391 aa23.94■■□□□ 1.42
C1orf43-201ENST00000350592 ZNF518AQ6AHZ1 1483 aa23.93■■□□□ 1.42
C1orf43-201ENST00000350592 ATP7AQ04656 1500 aa23.93■■□□□ 1.42
C1orf43-201ENST00000350592 ANKRD30BQ9BXX2 1392 aa23.92■■□□□ 1.42
C1orf43-201ENST00000350592 DIP2BQ9P265 1576 aa23.92■■□□□ 1.42
C1orf43-201ENST00000350592 UNC13BO14795 1591 aa23.91■■□□□ 1.42
C1orf43-201ENST00000350592 POGZQ7Z3K3 1410 aa23.9■■□□□ 1.42
C1orf43-201ENST00000350592 TONSLQ96HA7 1378 aa23.89■■□□□ 1.42
C1orf43-201ENST00000350592 FOXD1Q16676 465 aa23.88■■□□□ 1.41
C1orf43-201ENST00000350592 KDM5CP41229 1560 aa23.87■■□□□ 1.41
C1orf43-201ENST00000350592 FAM69CQ0P6D2 419 aa23.87■■□□□ 1.41
C1orf43-201ENST00000350592 MAGI2Q86UL8 1455 aa23.85■■□□□ 1.41
C1orf43-201ENST00000350592 PKD2Q13563 968 aa23.85■■□□□ 1.41
C1orf43-201ENST00000350592 FAM135AQ9P2D6 1515 aa23.85■■□□□ 1.41
C1orf43-201ENST00000350592 ZNF316A6NFI3 1004 aaPredicted RBP23.84■■□□□ 1.41
C1orf43-201ENST00000350592 PPP1R15AO75807 674 aaPredicted RBP23.83■■□□□ 1.41
C1orf43-201ENST00000350592 MLH3Q9UHC1 1453 aa23.83■■□□□ 1.4
C1orf43-201ENST00000350592 KIDINS220Q9ULH0 1771 aa23.82■■□□□ 1.4
C1orf43-201ENST00000350592 RPRD2Q5VT52 1461 aaKnown RBP23.81■■□□□ 1.4
C1orf43-201ENST00000350592 IQGAP3Q86VI3 1631 aa23.81■■□□□ 1.4
C1orf43-201ENST00000350592 DHX29Q7Z478 1369 aaKnown RBP23.81■■□□□ 1.4
C1orf43-201ENST00000350592 MYT1LQ9UL68 1186 aa23.81■■□□□ 1.4
C1orf43-201ENST00000350592 HECW2Q9P2P5 1572 aa23.79■■□□□ 1.4
C1orf43-201ENST00000350592 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms