RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 ATP10AO60312 1499 aa26.59■■□□□ 1.85
COPE-202ENST00000349893 PREX1Q8TCU6 1659 aa26.59■■□□□ 1.85
COPE-202ENST00000349893 CDK13Q14004 1512 aaKnown RBP26.58■■□□□ 1.85
COPE-202ENST00000349893 C9orf84Q5VXU9 1444 aa26.56■■□□□ 1.84
COPE-202ENST00000349893 RANGAP1P46060 587 aaPredicted RBP26.56■■□□□ 1.84
COPE-202ENST00000349893 PLPPR3Q6T4P5 718 aa26.56■■□□□ 1.84
COPE-202ENST00000349893 MLECQ14165 292 aa26.55■■□□□ 1.84
COPE-202ENST00000349893 MYO5CQ9NQX4 1742 aa26.5■■□□□ 1.83
COPE-202ENST00000349893 STRCQ7RTU9 1775 aa26.49■■□□□ 1.83
COPE-202ENST00000349893 KDM5CP41229 1560 aa26.47■■□□□ 1.83
COPE-202ENST00000349893 EFCAB2Q5VUJ9 269 aa26.46■■□□□ 1.83
COPE-202ENST00000349893 ZNF518AQ6AHZ1 1483 aa26.46■■□□□ 1.83
COPE-202ENST00000349893 SETD1BQ9UPS6 1966 aaKnown RBP26.44■■□□□ 1.82
COPE-202ENST00000349893 DMRT2Q9Y5R5 561 aa26.44■■□□□ 1.82
COPE-202ENST00000349893 REREQ9P2R6 1566 aa26.43■■□□□ 1.82
COPE-202ENST00000349893 CEBPAP49715 358 aaPredicted RBP26.42■■□□□ 1.82
COPE-202ENST00000349893 UHRF1BP1Q6BDS2 1440 aa26.41■■□□□ 1.82
COPE-202ENST00000349893 FMN1Q68DA7 1419 aa26.4■■□□□ 1.82
COPE-202ENST00000349893 KIF14Q15058 1648 aa26.4■■□□□ 1.82
COPE-202ENST00000349893 DIP2CQ9Y2E4 1556 aa26.38■■□□□ 1.81
COPE-202ENST00000349893 PTPRTO14522 1441 aa26.36■■□□□ 1.81
COPE-202ENST00000349893 TROQ12816 1431 aaPredicted RBP26.36■■□□□ 1.81
COPE-202ENST00000349893 ILDR2Q71H61 639 aa26.35■■□□□ 1.81
COPE-202ENST00000349893 CDK11AQ9UQ88 783 aaPredicted RBP26.35■■□□□ 1.81
COPE-202ENST00000349893 DISP3Q9P2K9 1392 aa26.34■■□□□ 1.81
COPE-202ENST00000349893 AFAP1Q8N556 730 aa26.34■■□□□ 1.81
COPE-202ENST00000349893 MLH3Q9UHC1 1453 aa26.34■■□□□ 1.81
COPE-202ENST00000349893 ARHGAP5Q13017 1502 aa26.34■■□□□ 1.81
COPE-202ENST00000349893 C3P01024 1663 aa26.33■■□□□ 1.81
COPE-202ENST00000349893 AGLP35573 1532 aa26.33■■□□□ 1.81
COPE-202ENST00000349893 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
COPE-202ENST00000349893 ABCA6Q8N139 1617 aa26.32■■□□□ 1.8
COPE-202ENST00000349893 SOCS7O14512 581 aa26.31■■□□□ 1.8
COPE-202ENST00000349893 CDC42BPBQ9Y5S2 1711 aa26.28■■□□□ 1.8
COPE-202ENST00000349893 LTBP4Q8N2S1 1624 aa26.28■■□□□ 1.8
COPE-202ENST00000349893 CLIP1P30622 1438 aa26.27■■□□□ 1.8
COPE-202ENST00000349893 IQSEC2Q5JU85 1478 aa26.26■■□□□ 1.79
COPE-202ENST00000349893 LRRIQ1Q96JM4 1722 aa26.25■■□□□ 1.79
COPE-202ENST00000349893 TRAPPC8Q9Y2L5 1435 aa26.24■■□□□ 1.79
COPE-202ENST00000349893 ATP1B4Q9UN42 357 aaPredicted RBP26.24■■□□□ 1.79
COPE-202ENST00000349893 ABCC1P33527 1531 aa26.24■■□□□ 1.79
COPE-202ENST00000349893 SPATA31D1Q6ZQQ2 1576 aa26.23■■□□□ 1.79
COPE-202ENST00000349893 PREX2Q70Z35 1606 aa26.22■■□□□ 1.79
COPE-202ENST00000349893 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
COPE-202ENST00000349893 ITSN2Q9NZM3 1697 aa26.2■■□□□ 1.78
COPE-202ENST00000349893 CNTLNQ9NXG0 1405 aa26.2■■□□□ 1.78
COPE-202ENST00000349893 KIDINS220Q9ULH0 1771 aa26.18■■□□□ 1.78
COPE-202ENST00000349893 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
COPE-202ENST00000349893 MYT1LQ9UL68 1186 aa26.15■■□□□ 1.78
COPE-202ENST00000349893 NPATQ14207 1427 aa26.14■■□□□ 1.78
COPE-202ENST00000349893 MROH2AA6NES4 1674 aa26.14■■□□□ 1.78
COPE-202ENST00000349893 ESF1Q9H501 851 aaKnown RBP26.13■■□□□ 1.77
COPE-202ENST00000349893 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
COPE-202ENST00000349893 CDC42BPAQ5VT25 1732 aa26.09■■□□□ 1.77
COPE-202ENST00000349893 CAMSAP1Q5T5Y3 1602 aa26.09■■□□□ 1.77
COPE-202ENST00000349893 CASKIN1Q8WXD9 1431 aa26.08■■□□□ 1.77
COPE-202ENST00000349893 SAMD9LQ8IVG5 1584 aa26.07■■□□□ 1.76
COPE-202ENST00000349893 ZMYM3Q14202 1370 aa26.03■■□□□ 1.76
COPE-202ENST00000349893 ZNF142P52746 1687 aaPredicted RBP26.03■■□□□ 1.76
COPE-202ENST00000349893 PLA2R1Q13018 1463 aa26.02■■□□□ 1.76
COPE-202ENST00000349893 PLXNC1O60486 1568 aa26■■□□□ 1.75
COPE-202ENST00000349893 EHMT2Q96KQ7 1210 aa26■■□□□ 1.75
COPE-202ENST00000349893 MYO3AQ8NEV4 1616 aa25.98■■□□□ 1.75
COPE-202ENST00000349893 SYCP2Q9BX26 1530 aa25.98■■□□□ 1.75
COPE-202ENST00000349893 TCOF1Q13428 1488 aaKnown RBP25.98■■□□□ 1.75
COPE-202ENST00000349893 INO80Q9ULG1 1556 aaPredicted RBP25.95■■□□□ 1.75
COPE-202ENST00000349893 GPATCH8Q9UKJ3 1502 aaKnown RBP25.95■■□□□ 1.74
COPE-202ENST00000349893 SUPT6HQ7KZ85 1726 aaKnown RBP25.95■■□□□ 1.74
COPE-202ENST00000349893 KIAA1107Q9UPP5 1409 aa25.95■■□□□ 1.74
COPE-202ENST00000349893 ATP7AQ04656 1500 aa25.94■■□□□ 1.74
COPE-202ENST00000349893 ZNF335Q9H4Z2 1342 aaPredicted RBP25.94■■□□□ 1.74
COPE-202ENST00000349893 NCKAP5LQ9HCH0 1330 aa25.94■■□□□ 1.74
COPE-202ENST00000349893 CLTCQ00610 1675 aaKnown RBP25.94■■□□□ 1.74
COPE-202ENST00000349893 FYCO1Q9BQS8 1478 aa25.94■■□□□ 1.74
COPE-202ENST00000349893 PKD2Q13563 968 aa25.94■■□□□ 1.74
COPE-202ENST00000349893 PTPRKQ15262 1439 aa25.94■■□□□ 1.74
COPE-202ENST00000349893 CEP170BQ9Y4F5 1589 aaPredicted RBP25.94■■□□□ 1.74
COPE-202ENST00000349893 SPAG9O60271 1321 aaKnown RBP25.93■■□□□ 1.74
COPE-202ENST00000349893 A2MP01023 1474 aa25.9■■□□□ 1.74
COPE-202ENST00000349893 PLEKHH2Q8IVE3 1493 aa25.9■■□□□ 1.74
COPE-202ENST00000349893 UBAP1LF5GYI3 381 aa25.88■■□□□ 1.73
COPE-202ENST00000349893 HNRNPMP52272 730 aaKnown RBP eCLIP25.86■■□□□ 1.73
COPE-202ENST00000349893 ZNF777Q9ULD5 760 aaPredicted RBP25.86■■□□□ 1.73
COPE-202ENST00000349893 PPP6R1Q9UPN7 881 aa25.86■■□□□ 1.73
COPE-202ENST00000349893 ADGBQ8N7X0 1667 aa25.82■■□□□ 1.72
COPE-202ENST00000349893 A2ML1A8K2U0 1454 aa25.81■■□□□ 1.72
COPE-202ENST00000349893 DNMT1P26358 1616 aaKnown RBP25.8■■□□□ 1.72
COPE-202ENST00000349893 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
COPE-202ENST00000349893 CFDP1Q9UEE9 299 aaPredicted RBP25.78■■□□□ 1.72
COPE-202ENST00000349893 GGT6Q6P531 493 aa25.77■■□□□ 1.72
COPE-202ENST00000349893 CCNB3Q8WWL7 1395 aa25.75■■□□□ 1.71
COPE-202ENST00000349893 CPS1P31327 1500 aa25.74■■□□□ 1.71
COPE-202ENST00000349893 NEURL4Q96JN8 1562 aa25.73■■□□□ 1.71
COPE-202ENST00000349893 MBD5Q9P267 1494 aa25.73■■□□□ 1.71
COPE-202ENST00000349893 POLR1AO95602 1720 aaPredicted RBP25.73■■□□□ 1.71
COPE-202ENST00000349893 RTEL1-TNFRSF6BF6WH68 1400 aa25.72■■□□□ 1.71
COPE-202ENST00000349893 MED1Q15648 1581 aaPredicted RBP25.71■■□□□ 1.71
COPE-202ENST00000349893 FAM135AQ9P2D6 1515 aa25.71■■□□□ 1.71
COPE-202ENST00000349893 TIAM1Q13009 1591 aa25.68■■□□□ 1.7
COPE-202ENST00000349893 DHX29Q7Z478 1369 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms