RNA–Protein interactions for RNA: ENST00000347529.7

EPB41-202, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-202ENST00000347529 TCOF1Q13428 1488 aaKnown RBP11.73□□□□□ -0.53
EPB41-202ENST00000347529 MPHOSPH9Q99550 1183 aa11.73□□□□□ -0.53
EPB41-202ENST00000347529 ARHGEF11O15085 1522 aa11.72□□□□□ -0.53
EPB41-202ENST00000347529 KIF7Q2M1P5 1343 aa11.72□□□□□ -0.53
EPB41-202ENST00000347529 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.54
EPB41-202ENST00000347529 USP35Q9P2H5 1018 aa11.71□□□□□ -0.54
EPB41-202ENST00000347529 KIF21AQ7Z4S6 1674 aa11.7□□□□□ -0.54
EPB41-202ENST00000347529 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
EPB41-202ENST00000347529 RPRD2Q5VT52 1461 aaKnown RBP11.7□□□□□ -0.54
EPB41-202ENST00000347529 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
EPB41-202ENST00000347529 MIA2Q96PC5 1412 aa11.68□□□□□ -0.54
EPB41-202ENST00000347529 KDM6BO15054 1643 aa11.68□□□□□ -0.54
EPB41-202ENST00000347529 ANO8Q9HCE9 1232 aaPredicted RBP11.67□□□□□ -0.54
EPB41-202ENST00000347529 TEX14Q8IWB6 1497 aa11.67□□□□□ -0.54
EPB41-202ENST00000347529 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
EPB41-202ENST00000347529 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
EPB41-202ENST00000347529 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
EPB41-202ENST00000347529 POLA1P09884 1462 aaPredicted RBP11.66□□□□□ -0.54
EPB41-202ENST00000347529 ANKRD30BQ9BXX2 1392 aa11.66□□□□□ -0.54
EPB41-202ENST00000347529 TCERG1O14776 1098 aaKnown RBP11.66□□□□□ -0.54
EPB41-202ENST00000347529 DHX29Q7Z478 1369 aaKnown RBP11.65□□□□□ -0.54
EPB41-202ENST00000347529 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.54
EPB41-202ENST00000347529 TOPBP1Q92547 1522 aa11.64□□□□□ -0.55
EPB41-202ENST00000347529 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
EPB41-202ENST00000347529 MAGI3Q5TCQ9 1506 aa11.63□□□□□ -0.55
EPB41-202ENST00000347529 NEFMP07197 916 aa11.63□□□□□ -0.55
EPB41-202ENST00000347529 FOXD1Q16676 465 aa11.62□□□□□ -0.55
EPB41-202ENST00000347529 SALL2Q9Y467 1007 aaPredicted RBP11.62□□□□□ -0.55
EPB41-202ENST00000347529 ROCK1Q13464 1354 aa11.62□□□□□ -0.55
EPB41-202ENST00000347529 MS4A1P11836 297 aa11.62□□□□□ -0.55
EPB41-202ENST00000347529 IL27Q8NEV9 243 aa11.62□□□□□ -0.55
EPB41-202ENST00000347529 TMC1Q8TDI8 760 aa11.62□□□□□ -0.55
EPB41-202ENST00000347529 PNISRQ8TF01 805 aaKnown RBP11.62□□□□□ -0.55
EPB41-202ENST00000347529 ROCK2O75116 1388 aaKnown RBP11.61□□□□□ -0.55
EPB41-202ENST00000347529 NPM2Q86SE8 214 aaKnown RBP11.61□□□□□ -0.55
EPB41-202ENST00000347529 PDE4AP27815 886 aa11.6□□□□□ -0.55
EPB41-202ENST00000347529 RRP1P56182 461 aaKnown RBP11.59□□□□□ -0.55
EPB41-202ENST00000347529 WASHC2CQ9Y4E1 1318 aa11.59□□□□□ -0.55
EPB41-202ENST00000347529 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
EPB41-202ENST00000347529 BACH2Q9BYV9 841 aa11.59□□□□□ -0.55
EPB41-202ENST00000347529 KTN1Q86UP2 1357 aaKnown RBP11.58□□□□□ -0.56
EPB41-202ENST00000347529 USP47Q96K76 1375 aa11.58□□□□□ -0.56
EPB41-202ENST00000347529 BCORL1Q5H9F3 1711 aa11.58□□□□□ -0.56
EPB41-202ENST00000347529 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
EPB41-202ENST00000347529 LAS1LQ9Y4W2 734 aaKnown RBP11.57□□□□□ -0.56
EPB41-202ENST00000347529 LRPPRCP42704 1394 aaKnown RBP11.57□□□□□ -0.56
EPB41-202ENST00000347529 NESP48681 1621 aa11.57□□□□□ -0.56
EPB41-202ENST00000347529 DAPK1P53355 1430 aa11.57□□□□□ -0.56
EPB41-202ENST00000347529 EPRSP07814 1512 aaKnown RBP11.56□□□□□ -0.56
EPB41-202ENST00000347529 KIF14Q15058 1648 aa11.56□□□□□ -0.56
EPB41-202ENST00000347529 POLR3GLQ9BT43 218 aa11.56□□□□□ -0.56
EPB41-202ENST00000347529 PHF23Q9BUL5 403 aaPredicted RBP11.56□□□□□ -0.56
EPB41-202ENST00000347529 BRD4O60885 1362 aaPredicted RBP11.56□□□□□ -0.56
EPB41-202ENST00000347529 KIF15Q9NS87 1388 aa11.56□□□□□ -0.56
EPB41-202ENST00000347529 DNMT1P26358 1616 aaKnown RBP11.56□□□□□ -0.56
EPB41-202ENST00000347529 CNGB1Q14028 1251 aaPredicted RBP11.56□□□□□ -0.56
EPB41-202ENST00000347529 EXOC6Q8TAG9 804 aa11.55□□□□□ -0.56
EPB41-202ENST00000347529 RCAN3Q9UKA8 241 aa11.55□□□□□ -0.56
EPB41-202ENST00000347529 MBD5Q9P267 1494 aa11.55□□□□□ -0.56
EPB41-202ENST00000347529 KDM5CP41229 1560 aa11.55□□□□□ -0.56
EPB41-202ENST00000347529 PDE3BQ13370 1112 aa11.55□□□□□ -0.56
EPB41-202ENST00000347529 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
EPB41-202ENST00000347529 RALBP1Q15311 655 aa11.54□□□□□ -0.56
EPB41-202ENST00000347529 GAPVD1Q14C86 1478 aa11.54□□□□□ -0.56
EPB41-202ENST00000347529 MYBBP1AQ9BQG0 1328 aaKnown RBP11.54□□□□□ -0.56
EPB41-202ENST00000347529 ABCC5O15440 1437 aa11.52□□□□□ -0.57
EPB41-202ENST00000347529 GSE1Q14687 1217 aa11.52□□□□□ -0.57
EPB41-202ENST00000347529 LAMC3Q9Y6N6 1575 aa11.51□□□□□ -0.57
EPB41-202ENST00000347529 CDK13Q14004 1512 aaKnown RBP11.5□□□□□ -0.57
EPB41-202ENST00000347529 TDRD9Q8NDG6 1382 aaKnown RBP11.5□□□□□ -0.57
EPB41-202ENST00000347529 PZPP20742 1482 aa11.5□□□□□ -0.57
EPB41-202ENST00000347529 KIAA1107Q9UPP5 1409 aa11.5□□□□□ -0.57
EPB41-202ENST00000347529 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
EPB41-202ENST00000347529 SENP3-EIF4A1A0A087X0R7 540 aa11.49□□□□□ -0.57
EPB41-202ENST00000347529 WDR62O43379 1518 aa11.49□□□□□ -0.57
EPB41-202ENST00000347529 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
EPB41-202ENST00000347529 UHRF1BP1Q6BDS2 1440 aa11.48□□□□□ -0.57
EPB41-202ENST00000347529 DAXXQ9UER7 740 aaPredicted RBP11.48□□□□□ -0.57
EPB41-202ENST00000347529 IQGAP2Q13576 1575 aa11.47□□□□□ -0.57
EPB41-202ENST00000347529 NLRP13Q86W25 1043 aa11.47□□□□□ -0.57
EPB41-202ENST00000347529 CARD11Q9BXL7 1154 aa11.47□□□□□ -0.57
EPB41-202ENST00000347529 ADGBQ8N7X0 1667 aa11.46□□□□□ -0.57
EPB41-202ENST00000347529 E9PCH4 1651 aa11.46□□□□□ -0.57
EPB41-202ENST00000347529 NFKBIBQ15653 356 aa11.46□□□□□ -0.58
EPB41-202ENST00000347529 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.58
EPB41-202ENST00000347529 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
EPB41-202ENST00000347529 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
EPB41-202ENST00000347529 INSRP06213 1382 aa11.44□□□□□ -0.58
EPB41-202ENST00000347529 BRPF3Q9ULD4 1205 aa11.44□□□□□ -0.58
EPB41-202ENST00000347529 ZMYM4Q5VZL5 1548 aa11.44□□□□□ -0.58
EPB41-202ENST00000347529 PKD2Q13563 968 aa11.43□□□□□ -0.58
EPB41-202ENST00000347529 UBE2Q2Q8WVN8 375 aa11.43□□□□□ -0.58
EPB41-202ENST00000347529 PARD3Q8TEW0 1356 aa11.43□□□□□ -0.58
EPB41-202ENST00000347529 ZNF644Q9H582 1327 aaPredicted RBP11.43□□□□□ -0.58
EPB41-202ENST00000347529 ST20-MTHFSA0A0A6YYL1 179 aa11.42□□□□□ -0.58
EPB41-202ENST00000347529 PLEKHH2Q8IVE3 1493 aa11.42□□□□□ -0.58
EPB41-202ENST00000347529 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
EPB41-202ENST00000347529 FRAT1Q92837 279 aaPredicted RBP11.41□□□□□ -0.58
EPB41-202ENST00000347529 ITSN2Q9NZM3 1697 aa11.41□□□□□ -0.58
EPB41-202ENST00000347529 CRBNQ96SW2 442 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms