RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 CDK11AQ9UQ88 783 aaPredicted RBP18.27■□□□□ 0.52
RNF13-201ENST00000344229 ABCC5O15440 1437 aa18.27■□□□□ 0.52
RNF13-201ENST00000344229 ABCA8O94911 1581 aa18.27■□□□□ 0.51
RNF13-201ENST00000344229 CHD1O14646 1710 aa18.26■□□□□ 0.51
RNF13-201ENST00000344229 ITSN2Q9NZM3 1697 aa18.24■□□□□ 0.51
RNF13-201ENST00000344229 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
RNF13-201ENST00000344229 TONSLQ96HA7 1378 aa18.23■□□□□ 0.51
RNF13-201ENST00000344229 GPATCH8Q9UKJ3 1502 aaKnown RBP18.22■□□□□ 0.51
RNF13-201ENST00000344229 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
RNF13-201ENST00000344229 CAMSAP2Q08AD1 1489 aa18.21■□□□□ 0.5
RNF13-201ENST00000344229 TRIM52Q96A61 297 aa18.2■□□□□ 0.5
RNF13-201ENST00000344229 ATP10BO94823 1461 aa18.2■□□□□ 0.5
RNF13-201ENST00000344229 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
RNF13-201ENST00000344229 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
RNF13-201ENST00000344229 BCL11AQ9H165 835 aa18.19■□□□□ 0.5
RNF13-201ENST00000344229 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
RNF13-201ENST00000344229 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
RNF13-201ENST00000344229 CROCC2H7BZ55 1655 aa18.17■□□□□ 0.5
RNF13-201ENST00000344229 ADGBQ8N7X0 1667 aa18.16■□□□□ 0.5
RNF13-201ENST00000344229 FOXD1Q16676 465 aa18.14■□□□□ 0.49
RNF13-201ENST00000344229 ABCC10Q5T3U5 1492 aa18.14■□□□□ 0.49
RNF13-201ENST00000344229 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
RNF13-201ENST00000344229 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
RNF13-201ENST00000344229 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
RNF13-201ENST00000344229 PLEKHD1A6NEE1 506 aa18.12■□□□□ 0.49
RNF13-201ENST00000344229 PTPRGP23470 1445 aa18.11■□□□□ 0.49
RNF13-201ENST00000344229 NCOA1Q15788 1441 aa18.1■□□□□ 0.49
RNF13-201ENST00000344229 ERCC6L2Q5T890 1561 aa18.08■□□□□ 0.49
RNF13-201ENST00000344229 KCNH8Q96L42 1107 aa18.08■□□□□ 0.48
RNF13-201ENST00000344229 ADGRL2O95490 1459 aa18.07■□□□□ 0.48
RNF13-201ENST00000344229 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
RNF13-201ENST00000344229 PZPP20742 1482 aa18.05■□□□□ 0.48
RNF13-201ENST00000344229 CDC42BPBQ9Y5S2 1711 aa18.04■□□□□ 0.48
RNF13-201ENST00000344229 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
RNF13-201ENST00000344229 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
RNF13-201ENST00000344229 RPRD2Q5VT52 1461 aaKnown RBP18.02■□□□□ 0.47
RNF13-201ENST00000344229 ANKRD30AQ9BXX3 1397 aa17.99■□□□□ 0.47
RNF13-201ENST00000344229 PREX2Q70Z35 1606 aa17.99■□□□□ 0.47
RNF13-201ENST00000344229 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
RNF13-201ENST00000344229 SAMD9LQ8IVG5 1584 aa17.98■□□□□ 0.47
RNF13-201ENST00000344229 SHANK2Q9UPX8 1470 aa17.98■□□□□ 0.47
RNF13-201ENST00000344229 C9orf84Q5VXU9 1444 aa17.97■□□□□ 0.47
RNF13-201ENST00000344229 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.478e-7■■■■□ 23.3
RNF13-201ENST00000344229 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
RNF13-201ENST00000344229 ANKRD50Q9ULJ7 1429 aa17.96■□□□□ 0.47
RNF13-201ENST00000344229 ARHGEF5Q12774 1597 aa17.96■□□□□ 0.47
RNF13-201ENST00000344229 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.47
RNF13-201ENST00000344229 CLASP1Q7Z460 1538 aa17.95■□□□□ 0.46
RNF13-201ENST00000344229 HSPA5P11021 654 aaKnown RBP17.95■□□□□ 0.46
RNF13-201ENST00000344229 ABCC2Q92887 1545 aa17.94■□□□□ 0.46
RNF13-201ENST00000344229 NBPF8Q3BBV2 869 aa17.94■□□□□ 0.46
RNF13-201ENST00000344229 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.93■□□□□ 0.46
RNF13-201ENST00000344229 PRKCSHP14314 528 aaPredicted RBP17.92■□□□□ 0.46
RNF13-201ENST00000344229 KIAA1107Q9UPP5 1409 aa17.92■□□□□ 0.46
RNF13-201ENST00000344229 PKD2Q13563 968 aa17.89■□□□□ 0.46
RNF13-201ENST00000344229 WASHC2AQ641Q2 1341 aa17.89■□□□□ 0.45
RNF13-201ENST00000344229 MYO5CQ9NQX4 1742 aa17.89■□□□□ 0.45
RNF13-201ENST00000344229 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
RNF13-201ENST00000344229 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
RNF13-201ENST00000344229 ZCCHC11Q5TAX3 1644 aaKnown RBP17.88■□□□□ 0.45
RNF13-201ENST00000344229 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
RNF13-201ENST00000344229 EIF4G2P78344 907 aaKnown RBP eCLIP17.87■□□□□ 0.45
RNF13-201ENST00000344229 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
RNF13-201ENST00000344229 SYCP2Q9BX26 1530 aa17.87■□□□□ 0.45
RNF13-201ENST00000344229 ANP32CO43423 234 aa17.87■□□□□ 0.45
RNF13-201ENST00000344229 KDM5DQ9BY66 1539 aa17.86■□□□□ 0.45
RNF13-201ENST00000344229 NUP155O75694 1391 aa17.86■□□□□ 0.45
RNF13-201ENST00000344229 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
RNF13-201ENST00000344229 C11orf95C9JLR9 678 aaPredicted RBP17.85■□□□□ 0.45
RNF13-201ENST00000344229 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
RNF13-201ENST00000344229 SPATA31E1Q6ZUB1 1445 aa17.82■□□□□ 0.44
RNF13-201ENST00000344229 POLR1AO95602 1720 aaPredicted RBP17.82■□□□□ 0.44
RNF13-201ENST00000344229 MAST1Q9Y2H9 1570 aa17.81■□□□□ 0.44
RNF13-201ENST00000344229 UHRF1BP1LA0JNW5 1464 aa17.81■□□□□ 0.44
RNF13-201ENST00000344229 ARHGEF12Q9NZN5 1544 aa17.8■□□□□ 0.44
RNF13-201ENST00000344229 RSPH4AQ5TD94 716 aa17.79■□□□□ 0.44
RNF13-201ENST00000344229 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
RNF13-201ENST00000344229 CCDC7Q96M83 1385 aa17.77■□□□□ 0.44
RNF13-201ENST00000344229 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.43
RNF13-201ENST00000344229 UNC13BO14795 1591 aa17.75■□□□□ 0.43
RNF13-201ENST00000344229 PLXNC1O60486 1568 aa17.75■□□□□ 0.43
RNF13-201ENST00000344229 PLCH2O75038 1416 aa17.75■□□□□ 0.43
RNF13-201ENST00000344229 CNTLNQ9NXG0 1405 aa17.74■□□□□ 0.43
RNF13-201ENST00000344229 BCORL1Q5H9F3 1711 aa17.74■□□□□ 0.43
RNF13-201ENST00000344229 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
RNF13-201ENST00000344229 PLEKHH2Q8IVE3 1493 aa17.72■□□□□ 0.43
RNF13-201ENST00000344229 KDM5CP41229 1560 aa17.71■□□□□ 0.43
RNF13-201ENST00000344229 KIF7Q2M1P5 1343 aa17.71■□□□□ 0.43
RNF13-201ENST00000344229 UHRF1BP1Q6BDS2 1440 aa17.71■□□□□ 0.42
RNF13-201ENST00000344229 ABCC1P33527 1531 aa17.7■□□□□ 0.42
RNF13-201ENST00000344229 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
RNF13-201ENST00000344229 IQGAP3Q86VI3 1631 aa17.68■□□□□ 0.42
RNF13-201ENST00000344229 USP47Q96K76 1375 aa17.67■□□□□ 0.42
RNF13-201ENST00000344229 TRAPPC8Q9Y2L5 1435 aa17.67■□□□□ 0.42
RNF13-201ENST00000344229 DUOX2Q9NRD8 1548 aa17.67■□□□□ 0.42
RNF13-201ENST00000344229 PLA2R1Q13018 1463 aa17.66■□□□□ 0.42
RNF13-201ENST00000344229 RALGAPBQ86X10 1494 aa17.66■□□□□ 0.42
RNF13-201ENST00000344229 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
RNF13-201ENST00000344229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.42
RNF13-201ENST00000344229 CCDC184Q52MB2 194 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms