RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ITSN2Q9NZM3 1697 aa21.41■■□□□ 1.02
PBX3-201ENST00000342287 KDM5BQ9UGL1 1544 aa21.4■■□□□ 1.02
PBX3-201ENST00000342287 ZNF644Q9H582 1327 aaPredicted RBP21.39■■□□□ 1.01
PBX3-201ENST00000342287 HFM1A2PYH4 1435 aa21.39■■□□□ 1.01
PBX3-201ENST00000342287 ZCCHC11Q5TAX3 1644 aaKnown RBP21.35■■□□□ 1.01
PBX3-201ENST00000342287 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
PBX3-201ENST00000342287 ZNF777Q9ULD5 760 aaPredicted RBP21.34■■□□□ 1.01
PBX3-201ENST00000342287 CAMSAP2Q08AD1 1489 aa21.34■■□□□ 1.01
PBX3-201ENST00000342287 CHIC2Q9UKJ5 165 aa21.34■■□□□ 1.01
PBX3-201ENST00000342287 DAPK1P53355 1430 aa21.34■■□□□ 1.01
PBX3-201ENST00000342287 NAIPQ13075 1403 aa21.33■■□□□ 1.01
PBX3-201ENST00000342287 CDC42BPAQ5VT25 1732 aa21.32■■□□□ 1
PBX3-201ENST00000342287 ABCC5O15440 1437 aa21.32■■□□□ 1
PBX3-201ENST00000342287 AKNAQ7Z591 1439 aa21.31■■□□□ 1
PBX3-201ENST00000342287 DNMT1P26358 1616 aaKnown RBP21.31■■□□□ 1
PBX3-201ENST00000342287 KCNH8Q96L42 1107 aa21.3■■□□□ 1
PBX3-201ENST00000342287 RRP7BPQ9NSQ0 103 aa21.29■■□□□ 1
PBX3-201ENST00000342287 ROCK1Q13464 1354 aa21.28■■□□□ 1
PBX3-201ENST00000342287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.27■■□□□ 1
PBX3-201ENST00000342287 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
PBX3-201ENST00000342287 TTC37Q6PGP7 1564 aa21.23■□□□□ 0.99
PBX3-201ENST00000342287 PREX2Q70Z35 1606 aa21.23■□□□□ 0.99
PBX3-201ENST00000342287 GCC2Q8IWJ2 1684 aa21.22■□□□□ 0.99
PBX3-201ENST00000342287 NPM1P06748 294 aaKnown RBP eCLIP21.21■□□□□ 0.99
PBX3-201ENST00000342287 CDC42BPBQ9Y5S2 1711 aa21.2■□□□□ 0.99
PBX3-201ENST00000342287 WDR7Q9Y4E6 1490 aa21.2■□□□□ 0.98
PBX3-201ENST00000342287 MAPKBP1O60336 1514 aa21.19■□□□□ 0.98
PBX3-201ENST00000342287 ARHGAP5Q13017 1502 aa21.18■□□□□ 0.98
PBX3-201ENST00000342287 RSPH4AQ5TD94 716 aa21.18■□□□□ 0.98
PBX3-201ENST00000342287 HNRNPMP52272 730 aaKnown RBP eCLIP21.17■□□□□ 0.98
PBX3-201ENST00000342287 PLCH2O75038 1416 aa21.17■□□□□ 0.98
PBX3-201ENST00000342287 MYO5CQ9NQX4 1742 aa21.16■□□□□ 0.98
PBX3-201ENST00000342287 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
PBX3-201ENST00000342287 TSPY4P0CV99 314 aa21.16■□□□□ 0.98
PBX3-201ENST00000342287 TSPY10P0CW01 314 aa21.16■□□□□ 0.98
PBX3-201ENST00000342287 SAMD9LQ8IVG5 1584 aa21.16■□□□□ 0.98
PBX3-201ENST00000342287 ADGRL2O95490 1459 aa21.15■□□□□ 0.98
PBX3-201ENST00000342287 MBD5Q9P267 1494 aa21.15■□□□□ 0.98
PBX3-201ENST00000342287 ASXL2Q76L83 1435 aa21.15■□□□□ 0.98
PBX3-201ENST00000342287 SHANK2Q9UPX8 1470 aa21.15■□□□□ 0.98
PBX3-201ENST00000342287 ARHGEF5Q12774 1597 aa21.15■□□□□ 0.98
PBX3-201ENST00000342287 CROCC2H7BZ55 1655 aa21.15■□□□□ 0.98
PBX3-201ENST00000342287 ANKRD30AQ9BXX3 1397 aa21.14■□□□□ 0.98
PBX3-201ENST00000342287 EFCAB2Q5VUJ9 269 aa21.14■□□□□ 0.97
PBX3-201ENST00000342287 PLEKHH2Q8IVE3 1493 aa21.12■□□□□ 0.97
PBX3-201ENST00000342287 ADGBQ8N7X0 1667 aa21.12■□□□□ 0.97
PBX3-201ENST00000342287 C9orf84Q5VXU9 1444 aa21.12■□□□□ 0.97
PBX3-201ENST00000342287 KIAA1107Q9UPP5 1409 aa21.11■□□□□ 0.97
PBX3-201ENST00000342287 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
PBX3-201ENST00000342287 KDM6BO15054 1643 aa21.11■□□□□ 0.97
PBX3-201ENST00000342287 CCDC141Q6ZP82 1450 aa21.1■□□□□ 0.97
PBX3-201ENST00000342287 ARAP3Q8WWN8 1544 aa21.08■□□□□ 0.96
PBX3-201ENST00000342287 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
PBX3-201ENST00000342287 ABCA9Q8IUA7 1624 aa21.05■□□□□ 0.96
PBX3-201ENST00000342287 CYB5RLQ6IPT4 315 aa21.05■□□□□ 0.96
PBX3-201ENST00000342287 SIN3AQ96ST3 1273 aa21.04■□□□□ 0.96
PBX3-201ENST00000342287 MPHOSPH9Q99550 1183 aa21.03■□□□□ 0.96
PBX3-201ENST00000342287 RIMBP3CA6NJZ7 1639 aa21.02■□□□□ 0.96
PBX3-201ENST00000342287 RIMBP3BA6NNM3 1639 aa21.02■□□□□ 0.96
PBX3-201ENST00000342287 RIMBP3Q9UFD9 1639 aa21.02■□□□□ 0.96
PBX3-201ENST00000342287 ANKRD50Q9ULJ7 1429 aa21.02■□□□□ 0.96
PBX3-201ENST00000342287 TIMELESSQ9UNS1 1208 aa21.02■□□□□ 0.95
PBX3-201ENST00000342287 ARHGEF12Q9NZN5 1544 aa21.01■□□□□ 0.95
PBX3-201ENST00000342287 KIF15Q9NS87 1388 aa21■□□□□ 0.95
PBX3-201ENST00000342287 MAST1Q9Y2H9 1570 aa20.99■□□□□ 0.95
PBX3-201ENST00000342287 ABCC1P33527 1531 aa20.99■□□□□ 0.95
PBX3-201ENST00000342287 FANCAO15360 1455 aa20.98■□□□□ 0.95
PBX3-201ENST00000342287 TSHZ2Q9NRE2 1034 aa20.97■□□□□ 0.95
PBX3-201ENST00000342287 DENND4BO75064 1496 aaPredicted RBP20.97■□□□□ 0.95
PBX3-201ENST00000342287 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
PBX3-201ENST00000342287 TRAPPC8Q9Y2L5 1435 aa20.94■□□□□ 0.94
PBX3-201ENST00000342287 ZNF316A6NFI3 1004 aaPredicted RBP20.92■□□□□ 0.94
PBX3-201ENST00000342287 CD109Q6YHK3 1445 aa20.92■□□□□ 0.94
PBX3-201ENST00000342287 PZPP20742 1482 aa20.9■□□□□ 0.94
PBX3-201ENST00000342287 PLXNC1O60486 1568 aa20.9■□□□□ 0.94
PBX3-201ENST00000342287 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
PBX3-201ENST00000342287 SPAG9O60271 1321 aaKnown RBP20.89■□□□□ 0.93
PBX3-201ENST00000342287 ADGRL1O94910 1474 aa20.89■□□□□ 0.93
PBX3-201ENST00000342287 RTEL1-TNFRSF6BF6WH68 1400 aa20.88■□□□□ 0.93
PBX3-201ENST00000342287 NUP155O75694 1391 aa20.88■□□□□ 0.93
PBX3-201ENST00000342287 SCAPERQ9BY12 1400 aa20.88■□□□□ 0.93
PBX3-201ENST00000342287 SLC24A1O60721 1099 aa20.88■□□□□ 0.93
PBX3-201ENST00000342287 TONSLQ96HA7 1378 aa20.88■□□□□ 0.93
PBX3-201ENST00000342287 FOXD1Q16676 465 aa20.87■□□□□ 0.93
PBX3-201ENST00000342287 ANKRD30BQ9BXX2 1392 aa20.86■□□□□ 0.93
PBX3-201ENST00000342287 DUOX2Q9NRD8 1548 aa20.85■□□□□ 0.93
PBX3-201ENST00000342287 PPP1R15AO75807 674 aaPredicted RBP20.85■□□□□ 0.93
PBX3-201ENST00000342287 KDM5DQ9BY66 1539 aa20.84■□□□□ 0.93
PBX3-201ENST00000342287 CFAP74Q9C0B2 1584 aa20.83■□□□□ 0.92
PBX3-201ENST00000342287 PKD2Q13563 968 aa20.82■□□□□ 0.92
PBX3-201ENST00000342287 ERBINQ96RT1 1412 aa20.82■□□□□ 0.92
PBX3-201ENST00000342287 ANO8Q9HCE9 1232 aaPredicted RBP20.82■□□□□ 0.92
PBX3-201ENST00000342287 ZFYVE16Q7Z3T8 1539 aa20.8■□□□□ 0.92
PBX3-201ENST00000342287 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
PBX3-201ENST00000342287 GLI2P10070 1586 aa20.78■□□□□ 0.92
PBX3-201ENST00000342287 ZNF518AQ6AHZ1 1483 aa20.77■□□□□ 0.92
PBX3-201ENST00000342287 NEO1Q92859 1461 aa20.77■□□□□ 0.92
PBX3-201ENST00000342287 ATP7AQ04656 1500 aa20.77■□□□□ 0.92
PBX3-201ENST00000342287 MYT1LQ9UL68 1186 aa20.77■□□□□ 0.92
PBX3-201ENST00000342287 INO80Q9ULG1 1556 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms