RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 APBB1O00213 710 aa18.52■□□□□ 0.56
PDPK1-202ENST00000342085 DRC7Q8IY82 874 aa18.52■□□□□ 0.56
PDPK1-202ENST00000342085 CWC22Q9HCG8 908 aaKnown RBP18.51■□□□□ 0.55
PDPK1-202ENST00000342085 KANK1Q14678 1352 aa18.51■□□□□ 0.55
PDPK1-202ENST00000342085 RGS3P49796 1198 aa18.5■□□□□ 0.55
PDPK1-202ENST00000342085 MCCP23508 829 aa18.49■□□□□ 0.55
PDPK1-202ENST00000342085 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
PDPK1-202ENST00000342085 RASSF8Q8NHQ8 419 aa18.46■□□□□ 0.55
PDPK1-202ENST00000342085 MARCH6O60337 910 aa18.46■□□□□ 0.55
PDPK1-202ENST00000342085 CTDP1Q9Y5B0 961 aaPredicted RBP18.44■□□□□ 0.54
PDPK1-202ENST00000342085 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
PDPK1-202ENST00000342085 KIAA1211Q6ZU35 1233 aa18.43■□□□□ 0.54
PDPK1-202ENST00000342085 RAD21O60216 631 aa18.42■□□□□ 0.54
PDPK1-202ENST00000342085 MS4A1P11836 297 aa18.42■□□□□ 0.54
PDPK1-202ENST00000342085 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
PDPK1-202ENST00000342085 CREBRFQ8IUR6 639 aa18.42■□□□□ 0.54
PDPK1-202ENST00000342085 EVA1CP58658 441 aa18.41■□□□□ 0.54
PDPK1-202ENST00000342085 CEP89Q96ST8 783 aa18.41■□□□□ 0.54
PDPK1-202ENST00000342085 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
PDPK1-202ENST00000342085 TOMM22Q9NS69 142 aa18.4■□□□□ 0.54
PDPK1-202ENST00000342085 MORC1Q86VD1 984 aa18.39■□□□□ 0.54
PDPK1-202ENST00000342085 TCEAL9Q9UHQ7 104 aa18.39■□□□□ 0.54
PDPK1-202ENST00000342085 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
PDPK1-202ENST00000342085 TRIM34Q9BYJ4 488 aa18.39■□□□□ 0.53
PDPK1-202ENST00000342085 EID1Q9Y6B2 187 aa18.38■□□□□ 0.53
PDPK1-202ENST00000342085 FBXW7Q969H0 707 aa18.37■□□□□ 0.53
PDPK1-202ENST00000342085 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
PDPK1-202ENST00000342085 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.53
PDPK1-202ENST00000342085 NAP1L5Q96NT1 182 aaPredicted RBP18.33■□□□□ 0.53
PDPK1-202ENST00000342085 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.53
PDPK1-202ENST00000342085 NUTM2FA1L443 756 aa18.32■□□□□ 0.52
PDPK1-202ENST00000342085 TMF1P82094 1093 aa18.31■□□□□ 0.52
PDPK1-202ENST00000342085 HSCBQ8IWL3 235 aa18.31■□□□□ 0.52
PDPK1-202ENST00000342085 DCAF11Q8TEB1 546 aa18.3■□□□□ 0.52
PDPK1-202ENST00000342085 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
PDPK1-202ENST00000342085 SAMD1Q6SPF0 538 aaPredicted RBP18.28■□□□□ 0.52
PDPK1-202ENST00000342085 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
PDPK1-202ENST00000342085 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.51
PDPK1-202ENST00000342085 GPATCH3Q96I76 525 aa18.27■□□□□ 0.51
PDPK1-202ENST00000342085 STK31Q9BXU1 1019 aa18.25■□□□□ 0.51
PDPK1-202ENST00000342085 PPP1R1BQ9UD71 204 aaPredicted RBP18.25■□□□□ 0.51
PDPK1-202ENST00000342085 AMPHP49418 695 aa18.24■□□□□ 0.51
PDPK1-202ENST00000342085 CCDC34Q96HJ3 373 aa18.24■□□□□ 0.51
PDPK1-202ENST00000342085 NOL10Q9BSC4 688 aaKnown RBP18.24■□□□□ 0.51
PDPK1-202ENST00000342085 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
PDPK1-202ENST00000342085 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
PDPK1-202ENST00000342085 PES1O00541 588 aaKnown RBP18.21■□□□□ 0.51
PDPK1-202ENST00000342085 TRIM6-TRIM34B2RNG4 842 aa18.21■□□□□ 0.51
PDPK1-202ENST00000342085 TPM4P67936 248 aa18.21■□□□□ 0.51
PDPK1-202ENST00000342085 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
PDPK1-202ENST00000342085 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
PDPK1-202ENST00000342085 CCNB3Q8WWL7 1395 aa18.2■□□□□ 0.5
PDPK1-202ENST00000342085 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
PDPK1-202ENST00000342085 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDPK1-202ENST00000342085 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
PDPK1-202ENST00000342085 AMOTL1Q8IY63 956 aa18.17■□□□□ 0.5
PDPK1-202ENST00000342085 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
PDPK1-202ENST00000342085 CHMP4AQ9BY43 222 aa18.16■□□□□ 0.5
PDPK1-202ENST00000342085 SUPT16HQ9Y5B9 1047 aaKnown RBP18.16■□□□□ 0.5
PDPK1-202ENST00000342085 IPO8O15397 1037 aaKnown RBP18.16■□□□□ 0.5
PDPK1-202ENST00000342085 NGEFQ8N5V2 710 aa18.16■□□□□ 0.5
PDPK1-202ENST00000342085 MSNP26038 577 aaKnown RBP18.16■□□□□ 0.5
PDPK1-202ENST00000342085 CLIP1P30622 1438 aa18.15■□□□□ 0.5
PDPK1-202ENST00000342085 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
PDPK1-202ENST00000342085 CFAP44Q96MT7 982 aa18.15■□□□□ 0.5
PDPK1-202ENST00000342085 SF3B2Q13435 895 aaKnown RBP18.14■□□□□ 0.49
PDPK1-202ENST00000342085 DHX16O60231 1041 aaKnown RBP18.14■□□□□ 0.49
PDPK1-202ENST00000342085 VPS37DQ86XT2 251 aa18.13■□□□□ 0.49
PDPK1-202ENST00000342085 CCAR1Q8IX12 1150 aaKnown RBP18.13■□□□□ 0.49
PDPK1-202ENST00000342085 HDAC5Q9UQL6 1122 aa18.12■□□□□ 0.49
PDPK1-202ENST00000342085 AKAP17AQ02040 695 aaKnown RBP18.11■□□□□ 0.49
PDPK1-202ENST00000342085 CCDC43Q96MW1 224 aaKnown RBP18.11■□□□□ 0.49
PDPK1-202ENST00000342085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.11■□□□□ 0.492e-6■■■■■ 89.3
PDPK1-202ENST00000342085 TPD52L1Q16890 204 aaPredicted RBP18.11■□□□□ 0.49
PDPK1-202ENST00000342085 NOL8Q76FK4 1167 aaKnown RBP18.11■□□□□ 0.49
PDPK1-202ENST00000342085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.1■□□□□ 0.495e-9■■□□□ 12
PDPK1-202ENST00000342085 C1orf141Q5JVX7 400 aa18.1■□□□□ 0.49
PDPK1-202ENST00000342085 MIER1Q8N108 512 aa18.08■□□□□ 0.48
PDPK1-202ENST00000342085 RTN4Q9NQC3 1192 aaKnown RBP18.08■□□□□ 0.48
PDPK1-202ENST00000342085 TPM3P06753 285 aa18.07■□□□□ 0.48
PDPK1-202ENST00000342085 PAF1Q8N7H5 531 aa18.07■□□□□ 0.48
PDPK1-202ENST00000342085 SF3A1Q15459 793 aaKnown RBP18.06■□□□□ 0.48
PDPK1-202ENST00000342085 GOLGA6L1Q8N7Z2 621 aa18.06■□□□□ 0.48
PDPK1-202ENST00000342085 RBM33Q96EV2 1170 aaKnown RBP18.05■□□□□ 0.48
PDPK1-202ENST00000342085 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
PDPK1-202ENST00000342085 R3HCC1Q9Y3T6 440 aaKnown RBP18.02■□□□□ 0.48
PDPK1-202ENST00000342085 FOXD1Q16676 465 aa18.02■□□□□ 0.48
PDPK1-202ENST00000342085 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
PDPK1-202ENST00000342085 ARID3AQ99856 593 aa18.02■□□□□ 0.47
PDPK1-202ENST00000342085 KIF3BO15066 747 aa18.01■□□□□ 0.47
PDPK1-202ENST00000342085 TERF2IPQ9NYB0 399 aa18.01■□□□□ 0.47
PDPK1-202ENST00000342085 HMMRO75330 724 aa18.01■□□□□ 0.47
PDPK1-202ENST00000342085 SYNE3Q6ZMZ3 975 aa18.01■□□□□ 0.47
PDPK1-202ENST00000342085 TPM2P07951 284 aa18■□□□□ 0.47
PDPK1-202ENST00000342085 TSR1Q2NL82 804 aaKnown RBP18■□□□□ 0.47
PDPK1-202ENST00000342085 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
PDPK1-202ENST00000342085 APPP05067 770 aa17.98■□□□□ 0.47
PDPK1-202ENST00000342085 TMEM132AQ24JP5 1023 aa17.98■□□□□ 0.47
PDPK1-202ENST00000342085 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
PDPK1-202ENST00000342085 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms