RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 UHRF1BP1LA0JNW5 1464 aa21.99■■□□□ 1.11
BRAT1-201ENST00000340611 ABCC10Q5T3U5 1492 aa21.99■■□□□ 1.11
BRAT1-201ENST00000340611 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
BRAT1-201ENST00000340611 CDC42BPAQ5VT25 1732 aa21.98■■□□□ 1.11
BRAT1-201ENST00000340611 TTC37Q6PGP7 1564 aa21.96■■□□□ 1.11
BRAT1-201ENST00000340611 MIA2Q96PC5 1412 aa21.95■■□□□ 1.11
BRAT1-201ENST00000340611 ZNF316A6NFI3 1004 aaPredicted RBP21.95■■□□□ 1.1
BRAT1-201ENST00000340611 TCOF1Q13428 1488 aaKnown RBP21.94■■□□□ 1.1
BRAT1-201ENST00000340611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.94■■□□□ 1.1
BRAT1-201ENST00000340611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.93■■□□□ 1.1
BRAT1-201ENST00000340611 CAMSAP2Q08AD1 1489 aa21.93■■□□□ 1.1
BRAT1-201ENST00000340611 RIMBP3CA6NJZ7 1639 aa21.92■■□□□ 1.1
BRAT1-201ENST00000340611 RIMBP3BA6NNM3 1639 aa21.92■■□□□ 1.1
BRAT1-201ENST00000340611 RIMBP3Q9UFD9 1639 aa21.92■■□□□ 1.1
BRAT1-201ENST00000340611 SETD5Q9C0A6 1442 aa21.92■■□□□ 1.1
BRAT1-201ENST00000340611 HNRNPMP52272 730 aaKnown RBP eCLIP21.92■■□□□ 1.1
BRAT1-201ENST00000340611 ITSN2Q9NZM3 1697 aa21.91■■□□□ 1.1
BRAT1-201ENST00000340611 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
BRAT1-201ENST00000340611 CDC42BPBQ9Y5S2 1711 aa21.89■■□□□ 1.09
BRAT1-201ENST00000340611 ASXL2Q76L83 1435 aa21.88■■□□□ 1.09
BRAT1-201ENST00000340611 ABCC5O15440 1437 aa21.88■■□□□ 1.09
BRAT1-201ENST00000340611 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
BRAT1-201ENST00000340611 DAPK1P53355 1430 aa21.87■■□□□ 1.09
BRAT1-201ENST00000340611 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
BRAT1-201ENST00000340611 WDR7Q9Y4E6 1490 aa21.84■■□□□ 1.09
BRAT1-201ENST00000340611 NAIPQ13075 1403 aa21.83■■□□□ 1.09
BRAT1-201ENST00000340611 MIER1Q8N108 512 aa21.83■■□□□ 1.08
BRAT1-201ENST00000340611 KDM6BO15054 1643 aa21.82■■□□□ 1.08
BRAT1-201ENST00000340611 DNMT1P26358 1616 aaKnown RBP21.82■■□□□ 1.08
BRAT1-201ENST00000340611 PREX2Q70Z35 1606 aa21.81■■□□□ 1.08
BRAT1-201ENST00000340611 SAMD9LQ8IVG5 1584 aa21.81■■□□□ 1.08
BRAT1-201ENST00000340611 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
BRAT1-201ENST00000340611 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
BRAT1-201ENST00000340611 SYCP2Q9BX26 1530 aa21.75■■□□□ 1.07
BRAT1-201ENST00000340611 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
BRAT1-201ENST00000340611 PLCH2O75038 1416 aa21.74■■□□□ 1.07
BRAT1-201ENST00000340611 TSHZ2Q9NRE2 1034 aa21.73■■□□□ 1.07
BRAT1-201ENST00000340611 MBD5Q9P267 1494 aa21.72■■□□□ 1.07
BRAT1-201ENST00000340611 ARHGEF12Q9NZN5 1544 aa21.72■■□□□ 1.07
BRAT1-201ENST00000340611 AKNAQ7Z591 1439 aa21.72■■□□□ 1.07
BRAT1-201ENST00000340611 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
BRAT1-201ENST00000340611 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
BRAT1-201ENST00000340611 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
BRAT1-201ENST00000340611 SIN3AQ96ST3 1273 aa21.69■■□□□ 1.06
BRAT1-201ENST00000340611 C9orf84Q5VXU9 1444 aa21.68■■□□□ 1.06
BRAT1-201ENST00000340611 CROCC2H7BZ55 1655 aa21.68■■□□□ 1.06
BRAT1-201ENST00000340611 AFAP1Q8N556 730 aa21.68■■□□□ 1.06
BRAT1-201ENST00000340611 NCOA1Q15788 1441 aa21.68■■□□□ 1.06
BRAT1-201ENST00000340611 MAPKBP1O60336 1514 aa21.67■■□□□ 1.06
BRAT1-201ENST00000340611 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
BRAT1-201ENST00000340611 FOXD1Q16676 465 aa21.67■■□□□ 1.06
BRAT1-201ENST00000340611 ABCA9Q8IUA7 1624 aa21.65■■□□□ 1.06
BRAT1-201ENST00000340611 ERICH6Q7L0X2 663 aa21.65■■□□□ 1.06
BRAT1-201ENST00000340611 TRAPPC8Q9Y2L5 1435 aa21.65■■□□□ 1.06
BRAT1-201ENST00000340611 FANCAO15360 1455 aa21.64■■□□□ 1.05
BRAT1-201ENST00000340611 CCDC141Q6ZP82 1450 aa21.64■■□□□ 1.05
BRAT1-201ENST00000340611 ROCK1Q13464 1354 aa21.63■■□□□ 1.05
BRAT1-201ENST00000340611 ANKRD30AQ9BXX3 1397 aa21.62■■□□□ 1.05
BRAT1-201ENST00000340611 ADGBQ8N7X0 1667 aa21.61■■□□□ 1.05
BRAT1-201ENST00000340611 CD109Q6YHK3 1445 aa21.61■■□□□ 1.05
BRAT1-201ENST00000340611 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
BRAT1-201ENST00000340611 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
BRAT1-201ENST00000340611 SUPT16HQ9Y5B9 1047 aaKnown RBP21.59■■□□□ 1.05
BRAT1-201ENST00000340611 KIF15Q9NS87 1388 aa21.59■■□□□ 1.05
BRAT1-201ENST00000340611 ABCC1P33527 1531 aa21.59■■□□□ 1.05
BRAT1-201ENST00000340611 FAM69CQ0P6D2 419 aa21.59■■□□□ 1.05
BRAT1-201ENST00000340611 ADGRL2O95490 1459 aa21.56■■□□□ 1.04
BRAT1-201ENST00000340611 SCAPERQ9BY12 1400 aa21.56■■□□□ 1.04
BRAT1-201ENST00000340611 ANKRD50Q9ULJ7 1429 aa21.56■■□□□ 1.04
BRAT1-201ENST00000340611 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
BRAT1-201ENST00000340611 ADGRL1O94910 1474 aa21.55■■□□□ 1.04
BRAT1-201ENST00000340611 KIAA1107Q9UPP5 1409 aa21.55■■□□□ 1.04
BRAT1-201ENST00000340611 DENND4BO75064 1496 aaPredicted RBP21.55■■□□□ 1.04
BRAT1-201ENST00000340611 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
BRAT1-201ENST00000340611 TSPOAP1O95153 1857 aa21.53■■□□□ 1.04
BRAT1-201ENST00000340611 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
BRAT1-201ENST00000340611 RSPH4AQ5TD94 716 aa21.52■■□□□ 1.03
BRAT1-201ENST00000340611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.52■■□□□ 1.032e-6■□□□□ 8.5
BRAT1-201ENST00000340611 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.03
BRAT1-201ENST00000340611 SPAG9O60271 1321 aaKnown RBP21.51■■□□□ 1.03
BRAT1-201ENST00000340611 RAPGEF3O95398 923 aa21.5■■□□□ 1.03
BRAT1-201ENST00000340611 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
BRAT1-201ENST00000340611 ARAP3Q8WWN8 1544 aa21.48■■□□□ 1.03
BRAT1-201ENST00000340611 NUP155O75694 1391 aa21.46■■□□□ 1.03
BRAT1-201ENST00000340611 DIP2BQ9P265 1576 aa21.44■■□□□ 1.02
BRAT1-201ENST00000340611 PZPP20742 1482 aa21.43■■□□□ 1.02
BRAT1-201ENST00000340611 PKD2Q13563 968 aa21.42■■□□□ 1.02
BRAT1-201ENST00000340611 MAST1Q9Y2H9 1570 aa21.42■■□□□ 1.02
BRAT1-201ENST00000340611 MAP3K4Q9Y6R4 1608 aa21.41■■□□□ 1.02
BRAT1-201ENST00000340611 ZFYVE16Q7Z3T8 1539 aa21.41■■□□□ 1.02
BRAT1-201ENST00000340611 ANO8Q9HCE9 1232 aaPredicted RBP21.38■■□□□ 1.01
BRAT1-201ENST00000340611 ATP7AQ04656 1500 aa21.37■■□□□ 1.01
BRAT1-201ENST00000340611 BCANQ96GW7 911 aa21.37■■□□□ 1.01
BRAT1-201ENST00000340611 PLXNC1O60486 1568 aa21.37■■□□□ 1.01
BRAT1-201ENST00000340611 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
BRAT1-201ENST00000340611 POGZQ7Z3K3 1410 aa21.34■■□□□ 1.01
BRAT1-201ENST00000340611 KIDINS220Q9ULH0 1771 aa21.34■■□□□ 1.01
BRAT1-201ENST00000340611 ZNF518AQ6AHZ1 1483 aa21.33■■□□□ 1.01
BRAT1-201ENST00000340611 KIF3BO15066 747 aa21.33■■□□□ 1.01
BRAT1-201ENST00000340611 INO80Q9ULG1 1556 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms