RNA–Protein interactions for RNA: ENST00000339626.5

RLIMP1-201, Transcript of ring finger protein, LIM domain interacting pseudogene 1, humanhuman

BASIC

Gene RLIMP1, Length 1,680 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMP1-201ENST00000339626 CABP2Q9NPB3 220 aa7.6□□□□□ -1.19
RLIMP1-201ENST00000339626 C3orf67Q6ZVT6 689 aa7.59□□□□□ -1.19
RLIMP1-201ENST00000339626 CEP164Q9UPV0 1460 aa7.59□□□□□ -1.19
RLIMP1-201ENST00000339626 CCDC88BA6NC98 1476 aa7.58□□□□□ -1.2
RLIMP1-201ENST00000339626 WDR62O43379 1518 aa7.58□□□□□ -1.2
RLIMP1-201ENST00000339626 TAOK2Q9UL54 1235 aa7.57□□□□□ -1.2
RLIMP1-201ENST00000339626 SNPHO15079 494 aa7.56□□□□□ -1.2
RLIMP1-201ENST00000339626 RIOK3O14730 519 aaKnown RBP7.55□□□□□ -1.2
RLIMP1-201ENST00000339626 PCDH10Q9P2E7 1040 aa7.55□□□□□ -1.2
RLIMP1-201ENST00000339626 URB2Q14146 1524 aaKnown RBP7.55□□□□□ -1.2
RLIMP1-201ENST00000339626 PDCD7Q8N8D1 485 aaKnown RBP7.54□□□□□ -1.2
RLIMP1-201ENST00000339626 VGFO15240 615 aaPredicted RBP7.53□□□□□ -1.2
RLIMP1-201ENST00000339626 EFCAB3Q8N7B9 438 aa7.49□□□□□ -1.21
RLIMP1-201ENST00000339626 BOLA1Q9Y3E2 137 aa7.49□□□□□ -1.21
RLIMP1-201ENST00000339626 ZNF608Q9ULD9 1512 aaPredicted RBP7.48□□□□□ -1.21
RLIMP1-201ENST00000339626 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 SUPT5HO00267 1087 aaKnown RBP7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 ECM2O94769 699 aaPredicted RBP7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 ILDR1Q86SU0 546 aaPredicted RBP7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 ZFP91Q96JP5 570 aaPredicted RBP7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 SOX12O15370 315 aa7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 ST18O60284 1047 aa7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 DPY19L2Q6NUT2 758 aa7.47□□□□□ -1.21
RLIMP1-201ENST00000339626 TMEM121BQ9BXQ6 578 aaPredicted RBP7.46□□□□□ -1.22
RLIMP1-201ENST00000339626 TOPBP1Q92547 1522 aa7.46□□□□□ -1.22
RLIMP1-201ENST00000339626 PRDM2Q13029 1718 aa7.44□□□□□ -1.22
RLIMP1-201ENST00000339626 RNF25Q96BH1 459 aaPredicted RBP7.44□□□□□ -1.22
RLIMP1-201ENST00000339626 IFT140Q96RY7 1462 aa7.44□□□□□ -1.22
RLIMP1-201ENST00000339626 AQRO60306 1485 aaKnown RBP eCLIP7.42□□□□□ -1.22
RLIMP1-201ENST00000339626 STK24Q9Y6E0 443 aa7.42□□□□□ -1.22
RLIMP1-201ENST00000339626 BCL11BQ9C0K0 894 aaPredicted RBP7.41□□□□□ -1.22
RLIMP1-201ENST00000339626 RAD54L2Q9Y4B4 1467 aa7.41□□□□□ -1.22
RLIMP1-201ENST00000339626 DNMBPQ6XZF7 1577 aa7.41□□□□□ -1.22
RLIMP1-201ENST00000339626 NLRP6P59044 892 aa7.41□□□□□ -1.22
RLIMP1-201ENST00000339626 CDAN1Q8IWY9 1227 aa7.41□□□□□ -1.22
RLIMP1-201ENST00000339626 STK25O00506 426 aa7.4□□□□□ -1.23
RLIMP1-201ENST00000339626 TDRD9Q8NDG6 1382 aaKnown RBP7.4□□□□□ -1.23
RLIMP1-201ENST00000339626 POLA1P09884 1462 aaPredicted RBP7.4□□□□□ -1.23
RLIMP1-201ENST00000339626 ABCC8Q09428 1581 aa7.39□□□□□ -1.23
RLIMP1-201ENST00000339626 PHF8Q9UPP1 1060 aa7.39□□□□□ -1.23
RLIMP1-201ENST00000339626 ZNF710Q8N1W2 664 aa7.38□□□□□ -1.23
RLIMP1-201ENST00000339626 EIF4G3O43432 1585 aaKnown RBP7.38□□□□□ -1.23
RLIMP1-201ENST00000339626 SOGA1O94964 1423 aa7.38□□□□□ -1.23
RLIMP1-201ENST00000339626 TARBP1Q13395 1621 aaKnown RBP7.37□□□□□ -1.23
RLIMP1-201ENST00000339626 EMP3P54852 163 aa7.37□□□□□ -1.23
RLIMP1-201ENST00000339626 DOK7Q18PE1 504 aa7.37□□□□□ -1.23
RLIMP1-201ENST00000339626 MICALL2Q8IY33 904 aa7.37□□□□□ -1.23
RLIMP1-201ENST00000339626 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
RLIMP1-201ENST00000339626 RIMBP2O15034 1052 aa7.36□□□□□ -1.23
RLIMP1-201ENST00000339626 MARVELD3Q96A59 401 aa7.36□□□□□ -1.23
RLIMP1-201ENST00000339626 CUX1P39880 1505 aa7.36□□□□□ -1.23
RLIMP1-201ENST00000339626 PKD2Q13563 968 aa7.35□□□□□ -1.23
RLIMP1-201ENST00000339626 RGL2O15211 777 aa7.34□□□□□ -1.23
RLIMP1-201ENST00000339626 CYB5RLQ6IPT4 315 aa7.34□□□□□ -1.23
RLIMP1-201ENST00000339626 RIMBP3CA6NJZ7 1639 aa7.33□□□□□ -1.24
RLIMP1-201ENST00000339626 RIMBP3BA6NNM3 1639 aa7.33□□□□□ -1.24
RLIMP1-201ENST00000339626 RIMBP3Q9UFD9 1639 aa7.33□□□□□ -1.24
RLIMP1-201ENST00000339626 ARHGEF11O15085 1522 aa7.33□□□□□ -1.24
RLIMP1-201ENST00000339626 MS4A4AQ96JQ5 239 aa7.32□□□□□ -1.24
RLIMP1-201ENST00000339626 CHMP7Q8WUX9 453 aaPredicted RBP7.32□□□□□ -1.24
RLIMP1-201ENST00000339626 SNAPC4Q5SXM2 1469 aa7.31□□□□□ -1.24
RLIMP1-201ENST00000339626 CHD1O14646 1710 aa7.31□□□□□ -1.24
RLIMP1-201ENST00000339626 FAM205CA6NFA0 338 aa7.3□□□□□ -1.24
RLIMP1-201ENST00000339626 HOXB3P14651 431 aaPredicted RBP7.29□□□□□ -1.24
RLIMP1-201ENST00000339626 FBXO22Q8NEZ5 403 aa7.29□□□□□ -1.24
RLIMP1-201ENST00000339626 MFRPQ9BY79 579 aa7.28□□□□□ -1.24
RLIMP1-201ENST00000339626 GRIN2BQ13224 1484 aa7.28□□□□□ -1.24
RLIMP1-201ENST00000339626 HOXB1P14653 301 aaPredicted RBP7.28□□□□□ -1.24
RLIMP1-201ENST00000339626 ERBB3P21860 1342 aa7.27□□□□□ -1.25
RLIMP1-201ENST00000339626 GAPVD1Q14C86 1478 aa7.27□□□□□ -1.25
RLIMP1-201ENST00000339626 HS3ST6Q96QI5 342 aa7.27□□□□□ -1.25
RLIMP1-201ENST00000339626 ZSWIM6Q9HCJ5 1215 aa7.27□□□□□ -1.25
RLIMP1-201ENST00000339626 ARAP1Q96P48 1450 aa7.26□□□□□ -1.25
RLIMP1-201ENST00000339626 WRNQ14191 1432 aaPredicted RBP eCLIP7.25□□□□□ -1.25
RLIMP1-201ENST00000339626 MAGI1Q96QZ7 1491 aaPredicted RBP7.25□□□□□ -1.25
RLIMP1-201ENST00000339626 ABCA10Q8WWZ4 1543 aa7.25□□□□□ -1.25
RLIMP1-201ENST00000339626 SYNJ1O43426 1573 aa7.25□□□□□ -1.25
RLIMP1-201ENST00000339626 TMEM92Q6UXU6 159 aa7.25□□□□□ -1.25
RLIMP1-201ENST00000339626 WDR97A6NE52 1622 aa7.24□□□□□ -1.25
RLIMP1-201ENST00000339626 SYNJ2O15056 1496 aa7.24□□□□□ -1.25
RLIMP1-201ENST00000339626 TMC2Q8TDI7 906 aa7.24□□□□□ -1.25
RLIMP1-201ENST00000339626 CLASP1Q7Z460 1538 aa7.23□□□□□ -1.25
RLIMP1-201ENST00000339626 ABCA5Q8WWZ7 1642 aa7.22□□□□□ -1.25
RLIMP1-201ENST00000339626 PBRM1Q86U86 1689 aa7.22□□□□□ -1.25
RLIMP1-201ENST00000339626 CHGAP10645 457 aaKnown RBP7.22□□□□□ -1.25
RLIMP1-201ENST00000339626 HS6ST3Q8IZP7 471 aa7.22□□□□□ -1.25
RLIMP1-201ENST00000339626 TOP2BQ02880 1626 aa7.21□□□□□ -1.25
RLIMP1-201ENST00000339626 SPNS2Q8IVW8 549 aa7.2□□□□□ -1.26
RLIMP1-201ENST00000339626 BIVM-ERCC5R4GMW8 1640 aa7.2□□□□□ -1.26
RLIMP1-201ENST00000339626 VARS2Q5ST30 1063 aaKnown RBP7.19□□□□□ -1.26
RLIMP1-201ENST00000339626 RYDENQ9NUL5 291 aaKnown RBP7.19□□□□□ -1.26
RLIMP1-201ENST00000339626 GRIN2AQ12879 1464 aa7.19□□□□□ -1.26
RLIMP1-201ENST00000339626 C2orf72A6NCS6 295 aa7.19□□□□□ -1.26
RLIMP1-201ENST00000339626 ERCC6L2Q5T890 1561 aa7.18□□□□□ -1.26
RLIMP1-201ENST00000339626 POTEB3A0JP26 581 aa7.18□□□□□ -1.26
RLIMP1-201ENST00000339626 ARSIQ5FYB1 569 aa7.18□□□□□ -1.26
RLIMP1-201ENST00000339626 POTEBQ6S5H4 581 aa7.18□□□□□ -1.26
RLIMP1-201ENST00000339626 FHAD1B1AJZ9 1412 aa7.17□□□□□ -1.26
RLIMP1-201ENST00000339626 MMRN1Q13201 1228 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms