RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ARHGAP35Q9NRY4 1499 aa25.86■■□□□ 1.73
LINC01116-202ENST00000339037 POGZQ7Z3K3 1410 aa25.86■■□□□ 1.73
LINC01116-202ENST00000339037 MAGI2Q86UL8 1455 aa25.85■■□□□ 1.73
LINC01116-202ENST00000339037 YEATS2Q9ULM3 1422 aa25.85■■□□□ 1.73
LINC01116-202ENST00000339037 PCF11O94913 1555 aaKnown RBP25.85■■□□□ 1.73
LINC01116-202ENST00000339037 SCAPERQ9BY12 1400 aa25.83■■□□□ 1.73
LINC01116-202ENST00000339037 RIMS1Q86UR5 1692 aaKnown RBP25.83■■□□□ 1.73
LINC01116-202ENST00000339037 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
LINC01116-202ENST00000339037 LMTK3Q96Q04 1460 aa25.82■■□□□ 1.72
LINC01116-202ENST00000339037 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
LINC01116-202ENST00000339037 SIGLEC1Q9BZZ2 1709 aa25.76■■□□□ 1.71
LINC01116-202ENST00000339037 MYO5CQ9NQX4 1742 aa25.75■■□□□ 1.71
LINC01116-202ENST00000339037 KIF14Q15058 1648 aa25.75■■□□□ 1.71
LINC01116-202ENST00000339037 TROQ12816 1431 aaPredicted RBP25.74■■□□□ 1.71
LINC01116-202ENST00000339037 CLIP1P30622 1438 aa25.72■■□□□ 1.71
LINC01116-202ENST00000339037 MLECQ14165 292 aa25.72■■□□□ 1.71
LINC01116-202ENST00000339037 FBXO41Q8TF61 875 aa25.72■■□□□ 1.71
LINC01116-202ENST00000339037 PIAS4Q8N2W9 510 aaPredicted RBP25.7■■□□□ 1.7
LINC01116-202ENST00000339037 ATP10AO60312 1499 aa25.7■■□□□ 1.7
LINC01116-202ENST00000339037 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
LINC01116-202ENST00000339037 C9orf84Q5VXU9 1444 aa25.69■■□□□ 1.7
LINC01116-202ENST00000339037 ZNF518AQ6AHZ1 1483 aa25.68■■□□□ 1.7
LINC01116-202ENST00000339037 FER1L4A9Z1Z3 1794 aa25.67■■□□□ 1.7
LINC01116-202ENST00000339037 HSPA2P54652 639 aa25.66■■□□□ 1.7
LINC01116-202ENST00000339037 ARHGEF12Q9NZN5 1544 aa25.64■■□□□ 1.7
LINC01116-202ENST00000339037 LRRIQ1Q96JM4 1722 aa25.63■■□□□ 1.69
LINC01116-202ENST00000339037 KDM5CP41229 1560 aa25.62■■□□□ 1.69
LINC01116-202ENST00000339037 AFAP1Q8N556 730 aa25.62■■□□□ 1.69
LINC01116-202ENST00000339037 CCDC18Q5T9S5 1454 aa25.6■■□□□ 1.69
LINC01116-202ENST00000339037 CASKIN1Q8WXD9 1431 aa25.6■■□□□ 1.69
LINC01116-202ENST00000339037 MYT1LQ9UL68 1186 aa25.57■■□□□ 1.68
LINC01116-202ENST00000339037 PREX2Q70Z35 1606 aa25.54■■□□□ 1.68
LINC01116-202ENST00000339037 CDC42BPBQ9Y5S2 1711 aa25.54■■□□□ 1.68
LINC01116-202ENST00000339037 DIP2CQ9Y2E4 1556 aa25.53■■□□□ 1.68
LINC01116-202ENST00000339037 MLH3Q9UHC1 1453 aa25.52■■□□□ 1.68
LINC01116-202ENST00000339037 ABCC1P33527 1531 aa25.52■■□□□ 1.68
LINC01116-202ENST00000339037 CEBPAP49715 358 aaPredicted RBP25.51■■□□□ 1.67
LINC01116-202ENST00000339037 REREQ9P2R6 1566 aa25.51■■□□□ 1.67
LINC01116-202ENST00000339037 FYCO1Q9BQS8 1478 aa25.5■■□□□ 1.67
LINC01116-202ENST00000339037 PREX1Q8TCU6 1659 aa25.49■■□□□ 1.67
LINC01116-202ENST00000339037 ABCA6Q8N139 1617 aa25.49■■□□□ 1.67
LINC01116-202ENST00000339037 TRAPPC8Q9Y2L5 1435 aa25.49■■□□□ 1.67
LINC01116-202ENST00000339037 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
LINC01116-202ENST00000339037 AGLP35573 1532 aa25.42■■□□□ 1.66
LINC01116-202ENST00000339037 UHRF1BP1Q6BDS2 1440 aa25.42■■□□□ 1.66
LINC01116-202ENST00000339037 CDC42BPAQ5VT25 1732 aa25.42■■□□□ 1.66
LINC01116-202ENST00000339037 CERKQ8TCT0 537 aa25.4■■□□□ 1.66
LINC01116-202ENST00000339037 ESF1Q9H501 851 aaKnown RBP25.4■■□□□ 1.66
LINC01116-202ENST00000339037 ZNF777Q9ULD5 760 aaPredicted RBP25.38■■□□□ 1.65
LINC01116-202ENST00000339037 KIDINS220Q9ULH0 1771 aa25.38■■□□□ 1.65
LINC01116-202ENST00000339037 GPATCH8Q9UKJ3 1502 aaKnown RBP25.36■■□□□ 1.65
LINC01116-202ENST00000339037 SETD1BQ9UPS6 1966 aaKnown RBP25.35■■□□□ 1.65
LINC01116-202ENST00000339037 DMRT2Q9Y5R5 561 aa25.35■■□□□ 1.65
LINC01116-202ENST00000339037 SYCP2Q9BX26 1530 aa25.35■■□□□ 1.65
LINC01116-202ENST00000339037 SAMD9LQ8IVG5 1584 aa25.35■■□□□ 1.65
LINC01116-202ENST00000339037 C3P01024 1663 aa25.34■■□□□ 1.65
LINC01116-202ENST00000339037 CNTLNQ9NXG0 1405 aa25.33■■□□□ 1.65
LINC01116-202ENST00000339037 SPAG9O60271 1321 aaKnown RBP25.31■■□□□ 1.64
LINC01116-202ENST00000339037 STRCQ7RTU9 1775 aa25.3■■□□□ 1.64
LINC01116-202ENST00000339037 HNRNPMP52272 730 aaKnown RBP eCLIP25.29■■□□□ 1.64
LINC01116-202ENST00000339037 CFDP1Q9UEE9 299 aaPredicted RBP25.29■■□□□ 1.64
LINC01116-202ENST00000339037 CCNB3Q8WWL7 1395 aa25.28■■□□□ 1.64
LINC01116-202ENST00000339037 KIAA1107Q9UPP5 1409 aa25.28■■□□□ 1.64
LINC01116-202ENST00000339037 PLEKHH2Q8IVE3 1493 aa25.28■■□□□ 1.64
LINC01116-202ENST00000339037 MTUS2Q5JR59 1369 aa25.27■■□□□ 1.64
LINC01116-202ENST00000339037 ATP7AQ04656 1500 aa25.25■■□□□ 1.63
LINC01116-202ENST00000339037 INO80Q9ULG1 1556 aaPredicted RBP25.22■■□□□ 1.63
LINC01116-202ENST00000339037 PTPRTO14522 1441 aa25.21■■□□□ 1.63
LINC01116-202ENST00000339037 NPATQ14207 1427 aa25.21■■□□□ 1.63
LINC01116-202ENST00000339037 PLXNC1O60486 1568 aa25.2■■□□□ 1.62
LINC01116-202ENST00000339037 MROH2AA6NES4 1674 aa25.2■■□□□ 1.62
LINC01116-202ENST00000339037 SUPT6HQ7KZ85 1726 aaKnown RBP25.19■■□□□ 1.62
LINC01116-202ENST00000339037 A2MP01023 1474 aa25.19■■□□□ 1.62
LINC01116-202ENST00000339037 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
LINC01116-202ENST00000339037 NCOA1Q15788 1441 aa25.17■■□□□ 1.62
LINC01116-202ENST00000339037 EHBP1L1Q8N3D4 1523 aa25.16■■□□□ 1.62
LINC01116-202ENST00000339037 TIAM1Q13009 1591 aa25.14■■□□□ 1.62
LINC01116-202ENST00000339037 ZNF644Q9H582 1327 aaPredicted RBP25.12■■□□□ 1.61
LINC01116-202ENST00000339037 CLTCQ00610 1675 aaKnown RBP25.11■■□□□ 1.61
LINC01116-202ENST00000339037 GGT6Q6P531 493 aa25.11■■□□□ 1.61
LINC01116-202ENST00000339037 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
LINC01116-202ENST00000339037 KCNA4P22459 653 aa25.1■■□□□ 1.61
LINC01116-202ENST00000339037 CAMSAP1Q5T5Y3 1602 aa25.1■■□□□ 1.61
LINC01116-202ENST00000339037 MBD5Q9P267 1494 aa25.09■■□□□ 1.61
LINC01116-202ENST00000339037 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.61
LINC01116-202ENST00000339037 PTPRKQ15262 1439 aa25.06■■□□□ 1.6
LINC01116-202ENST00000339037 LTBP4Q8N2S1 1624 aa25.06■■□□□ 1.6
LINC01116-202ENST00000339037 MYO3AQ8NEV4 1616 aa25.05■■□□□ 1.6
LINC01116-202ENST00000339037 RTEL1-TNFRSF6BF6WH68 1400 aa25.05■■□□□ 1.6
LINC01116-202ENST00000339037 ZNF142P52746 1687 aaPredicted RBP25.03■■□□□ 1.6
LINC01116-202ENST00000339037 CEP170BQ9Y4F5 1589 aaPredicted RBP25.02■■□□□ 1.6
LINC01116-202ENST00000339037 PLA2R1Q13018 1463 aa25.02■■□□□ 1.6
LINC01116-202ENST00000339037 NCKAP5LQ9HCH0 1330 aa25.01■■□□□ 1.59
LINC01116-202ENST00000339037 NCOA2Q15596 1464 aa25.01■■□□□ 1.59
LINC01116-202ENST00000339037 IQSEC2Q5JU85 1478 aa25.01■■□□□ 1.59
LINC01116-202ENST00000339037 DHX29Q7Z478 1369 aaKnown RBP25■■□□□ 1.59
LINC01116-202ENST00000339037 CCDC141Q6ZP82 1450 aa25■■□□□ 1.59
LINC01116-202ENST00000339037 PKD2Q13563 968 aa24.98■■□□□ 1.59
LINC01116-202ENST00000339037 CAMSAP2Q08AD1 1489 aa24.97■■□□□ 1.59
LINC01116-202ENST00000339037 TCOF1Q13428 1488 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms