RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 WASHC2CQ9Y4E1 1318 aa10.03□□□□□ -0.8
TRIM2-201ENST00000338700 KIF3BO15066 747 aa10.03□□□□□ -0.8
TRIM2-201ENST00000338700 RSPH4AQ5TD94 716 aa10.03□□□□□ -0.8
TRIM2-201ENST00000338700 SIN3AQ96ST3 1273 aa10.02□□□□□ -0.81
TRIM2-201ENST00000338700 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
TRIM2-201ENST00000338700 TNNT2P45379 298 aaPredicted RBP10.02□□□□□ -0.81
TRIM2-201ENST00000338700 U2SURPO15042 1029 aaKnown RBP10.02□□□□□ -0.81
TRIM2-201ENST00000338700 CC2D1BQ5T0F9 858 aaKnown RBP10.02□□□□□ -0.81
TRIM2-201ENST00000338700 MS4A1P11836 297 aa10.01□□□□□ -0.81
TRIM2-201ENST00000338700 SRPK2P78362 688 aaKnown RBP10.01□□□□□ -0.81
TRIM2-201ENST00000338700 GOLGA6L22H0YM25 854 aa10□□□□□ -0.81
TRIM2-201ENST00000338700 NBR1Q14596 966 aa10□□□□□ -0.81
TRIM2-201ENST00000338700 CCDC18Q5T9S5 1454 aa10□□□□□ -0.81
TRIM2-201ENST00000338700 HNRNPMP52272 730 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM2-201ENST00000338700 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
TRIM2-201ENST00000338700 BICRAQ9NZM4 1560 aa9.98□□□□□ -0.81
TRIM2-201ENST00000338700 CFTRP13569 1480 aa9.98□□□□□ -0.81
TRIM2-201ENST00000338700 OS9Q13438 667 aaPredicted RBP9.98□□□□□ -0.81
TRIM2-201ENST00000338700 TIMELESSQ9UNS1 1208 aa9.98□□□□□ -0.81
TRIM2-201ENST00000338700 SETD5Q9C0A6 1442 aa9.97□□□□□ -0.81
TRIM2-201ENST00000338700 ZRSR1Q15695 479 aaKnown RBP9.97□□□□□ -0.81
TRIM2-201ENST00000338700 HDGFL2Q7Z4V5 671 aaPredicted RBP9.96□□□□□ -0.81
TRIM2-201ENST00000338700 MORC1Q86VD1 984 aa9.96□□□□□ -0.81
TRIM2-201ENST00000338700 SENP3-EIF4A1A0A087X0R7 540 aa9.96□□□□□ -0.81
TRIM2-201ENST00000338700 FRAT1Q92837 279 aaPredicted RBP9.96□□□□□ -0.81
TRIM2-201ENST00000338700 PRG4Q92954 1404 aaPredicted RBP9.96□□□□□ -0.81
TRIM2-201ENST00000338700 VPS8Q8N3P4 1428 aa9.96□□□□□ -0.81
TRIM2-201ENST00000338700 FHOD3Q2V2M9 1422 aa9.96□□□□□ -0.82
TRIM2-201ENST00000338700 ANKRD30AQ9BXX3 1397 aa9.96□□□□□ -0.82
TRIM2-201ENST00000338700 MEX3CQ5U5Q3 659 aaKnown RBP9.96□□□□□ -0.82
TRIM2-201ENST00000338700 PRDM2Q13029 1718 aa9.95□□□□□ -0.82
TRIM2-201ENST00000338700 PKD2Q13563 968 aa9.95□□□□□ -0.82
TRIM2-201ENST00000338700 SAFB2Q14151 953 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRIM2-201ENST00000338700 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
TRIM2-201ENST00000338700 SOX12O15370 315 aa9.94□□□□□ -0.82
TRIM2-201ENST00000338700 SNAPC4Q5SXM2 1469 aa9.94□□□□□ -0.82
TRIM2-201ENST00000338700 STK26Q9P289 416 aa9.94□□□□□ -0.82
TRIM2-201ENST00000338700 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
TRIM2-201ENST00000338700 SUPT16HQ9Y5B9 1047 aaKnown RBP9.94□□□□□ -0.82
TRIM2-201ENST00000338700 RTF1Q92541 710 aaKnown RBP9.93□□□□□ -0.82
TRIM2-201ENST00000338700 TOPBP1Q92547 1522 aa9.93□□□□□ -0.82
TRIM2-201ENST00000338700 PAK3O75914 559 aaPredicted RBP9.93□□□□□ -0.82
TRIM2-201ENST00000338700 RTN4Q9NQC3 1192 aaKnown RBP9.93□□□□□ -0.82
TRIM2-201ENST00000338700 NUP155O75694 1391 aa9.9□□□□□ -0.82
TRIM2-201ENST00000338700 EIF3AQ14152 1382 aaKnown RBP9.9□□□□□ -0.82
TRIM2-201ENST00000338700 ROCK2O75116 1388 aaKnown RBP9.9□□□□□ -0.82
TRIM2-201ENST00000338700 KTN1Q86UP2 1357 aaKnown RBP9.9□□□□□ -0.82
TRIM2-201ENST00000338700 DNMBPQ6XZF7 1577 aa9.9□□□□□ -0.82
TRIM2-201ENST00000338700 FGD1P98174 961 aa9.9□□□□□ -0.82
TRIM2-201ENST00000338700 TRIM44Q96DX7 344 aaPredicted RBP9.9□□□□□ -0.82
TRIM2-201ENST00000338700 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.82
TRIM2-201ENST00000338700 KCNJ4P48050 445 aa9.89□□□□□ -0.83
TRIM2-201ENST00000338700 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
TRIM2-201ENST00000338700 UNC13AQ9UPW8 1703 aa9.89□□□□□ -0.83
TRIM2-201ENST00000338700 HSPA5P11021 654 aaKnown RBP9.89□□□□□ -0.83
TRIM2-201ENST00000338700 RGS3P49796 1198 aa9.88□□□□□ -0.83
TRIM2-201ENST00000338700 PHF23Q9BUL5 403 aaPredicted RBP9.88□□□□□ -0.83
TRIM2-201ENST00000338700 MPHOSPH9Q99550 1183 aa9.88□□□□□ -0.83
TRIM2-201ENST00000338700 CALD1Q05682 793 aaKnown RBP9.88□□□□□ -0.83
TRIM2-201ENST00000338700 IGF1RP08069 1367 aa9.87□□□□□ -0.83
TRIM2-201ENST00000338700 POGZQ7Z3K3 1410 aa9.87□□□□□ -0.83
TRIM2-201ENST00000338700 SYNJ2O15056 1496 aa9.87□□□□□ -0.83
TRIM2-201ENST00000338700 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
TRIM2-201ENST00000338700 FOXD1Q16676 465 aa9.86□□□□□ -0.83
TRIM2-201ENST00000338700 PTMAP06454 111 aaKnown RBP9.86□□□□□ -0.83
TRIM2-201ENST00000338700 TULP1O00294 542 aaPredicted RBP9.86□□□□□ -0.83
TRIM2-201ENST00000338700 HSP90AB1P08238 724 aaKnown RBP9.86□□□□□ -0.83
TRIM2-201ENST00000338700 CFAP44Q96MT7 982 aa9.86□□□□□ -0.83
TRIM2-201ENST00000338700 NAP1L2Q9ULW6 460 aaPredicted RBP9.85□□□□□ -0.83
TRIM2-201ENST00000338700 TPRNQ4KMQ1 711 aa9.85□□□□□ -0.83
TRIM2-201ENST00000338700 SYNJ1O43426 1573 aa9.85□□□□□ -0.83
TRIM2-201ENST00000338700 CCER2I3L3R5 266 aa9.85□□□□□ -0.83
TRIM2-201ENST00000338700 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
TRIM2-201ENST00000338700 IPO8O15397 1037 aaKnown RBP9.85□□□□□ -0.83
TRIM2-201ENST00000338700 MCCP23508 829 aa9.85□□□□□ -0.83
TRIM2-201ENST00000338700 CHMP4AQ9BY43 222 aa9.84□□□□□ -0.83
TRIM2-201ENST00000338700 TAOK2Q9UL54 1235 aa9.84□□□□□ -0.83
TRIM2-201ENST00000338700 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRIM2-201ENST00000338700 RAB3GAP2Q9H2M9 1393 aa9.83□□□□□ -0.84
TRIM2-201ENST00000338700 NGDNQ8NEJ9 315 aaKnown RBP9.83□□□□□ -0.84
TRIM2-201ENST00000338700 TERF2IPQ9NYB0 399 aa9.83□□□□□ -0.84
TRIM2-201ENST00000338700 RALBP1Q15311 655 aa9.83□□□□□ -0.84
TRIM2-201ENST00000338700 AMER1Q5JTC6 1135 aaPredicted RBP9.83□□□□□ -0.84
TRIM2-201ENST00000338700 NUTM2DQ5VT03 806 aaPredicted RBP9.83□□□□□ -0.84
TRIM2-201ENST00000338700 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.83□□□□□ -0.84
TRIM2-201ENST00000338700 U2AF1L5P0DN76 240 aaPredicted RBP9.82□□□□□ -0.84
TRIM2-201ENST00000338700 ATF3P18847 181 aa9.82□□□□□ -0.84
TRIM2-201ENST00000338700 U2AF1Q01081 240 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRIM2-201ENST00000338700 GOLGA6L6A8MZA4 724 aa9.82□□□□□ -0.84
TRIM2-201ENST00000338700 ARHGAP5Q13017 1502 aa9.81□□□□□ -0.84
TRIM2-201ENST00000338700 TMX4Q9H1E5 349 aaPredicted RBP9.8□□□□□ -0.84
TRIM2-201ENST00000338700 DCAF8L1A6NGE4 600 aa9.8□□□□□ -0.84
TRIM2-201ENST00000338700 HSCBQ8IWL3 235 aa9.8□□□□□ -0.84
TRIM2-201ENST00000338700 EVA1CP58658 441 aa9.8□□□□□ -0.84
TRIM2-201ENST00000338700 MAGI1Q96QZ7 1491 aaPredicted RBP9.8□□□□□ -0.84
TRIM2-201ENST00000338700 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
TRIM2-201ENST00000338700 GOLGA6L4A6NEF3 574 aa9.78□□□□□ -0.84
TRIM2-201ENST00000338700 UACAQ9BZF9 1416 aa9.78□□□□□ -0.84
TRIM2-201ENST00000338700 VGFO15240 615 aaPredicted RBP9.78□□□□□ -0.84
TRIM2-201ENST00000338700 NAP1L5Q96NT1 182 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms