RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 ROCK1Q13464 1354 aa27.71■■■□□ 2.03
CDCA4-201ENST00000336219 WASHC2AQ641Q2 1341 aa27.7■■■□□ 2.03
CDCA4-201ENST00000336219 NUP153P49790 1475 aaKnown RBP27.7■■■□□ 2.02
CDCA4-201ENST00000336219 RAPGEF6Q8TEU7 1601 aa27.69■■■□□ 2.02
CDCA4-201ENST00000336219 MSH5O43196 834 aa27.68■■■□□ 2.02
CDCA4-201ENST00000336219 ABCC5O15440 1437 aa27.67■■■□□ 2.02
CDCA4-201ENST00000336219 EIF4G2P78344 907 aaKnown RBP eCLIP27.66■■■□□ 2.02
CDCA4-201ENST00000336219 L3MBTL2Q969R5 705 aa27.65■■■□□ 2.02
CDCA4-201ENST00000336219 GRIN2AQ12879 1464 aa27.64■■■□□ 2.02
CDCA4-201ENST00000336219 FOXD1Q16676 465 aa27.63■■■□□ 2.01
CDCA4-201ENST00000336219 BCL11AQ9H165 835 aa27.62■■■□□ 2.01
CDCA4-201ENST00000336219 ANKRD30BQ9BXX2 1392 aa27.62■■■□□ 2.01
CDCA4-201ENST00000336219 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
CDCA4-201ENST00000336219 RPRD2Q5VT52 1461 aaKnown RBP27.62■■■□□ 2.01
CDCA4-201ENST00000336219 ZNF644Q9H582 1327 aaPredicted RBP27.59■■■□□ 2.01
CDCA4-201ENST00000336219 CCDC184Q52MB2 194 aa27.59■■■□□ 2.01
CDCA4-201ENST00000336219 CDK11AQ9UQ88 783 aaPredicted RBP27.58■■■□□ 2
CDCA4-201ENST00000336219 TEX14Q8IWB6 1497 aa27.57■■■□□ 2
CDCA4-201ENST00000336219 CNTLNQ9NXG0 1405 aa27.57■■■□□ 2
CDCA4-201ENST00000336219 NCOA1Q15788 1441 aa27.55■■■□□ 2
CDCA4-201ENST00000336219 ITSN2Q9NZM3 1697 aa27.52■■■□□ 2
CDCA4-201ENST00000336219 TROQ12816 1431 aaPredicted RBP27.52■■■□□ 2
CDCA4-201ENST00000336219 CCDC7Q96M83 1385 aa27.5■■□□□ 1.99
CDCA4-201ENST00000336219 PRG4Q92954 1404 aaPredicted RBP27.5■■□□□ 1.99
CDCA4-201ENST00000336219 CAMSAP2Q08AD1 1489 aa27.5■■□□□ 1.99
CDCA4-201ENST00000336219 NBPF8Q3BBV2 869 aa27.49■■□□□ 1.99
CDCA4-201ENST00000336219 SLC4A1APQ9BWU0 796 aaKnown RBP27.49■■□□□ 1.99
CDCA4-201ENST00000336219 ADGBQ8N7X0 1667 aa27.49■■□□□ 1.99
CDCA4-201ENST00000336219 C11orf95C9JLR9 678 aaPredicted RBP27.49■■□□□ 1.99
CDCA4-201ENST00000336219 POLR1AO95602 1720 aaPredicted RBP27.48■■□□□ 1.99
CDCA4-201ENST00000336219 MAGI1Q96QZ7 1491 aaPredicted RBP27.48■■□□□ 1.99
CDCA4-201ENST00000336219 ADCY10Q96PN6 1610 aa27.47■■□□□ 1.99
CDCA4-201ENST00000336219 CEP170Q5SW79 1584 aa27.47■■□□□ 1.99
CDCA4-201ENST00000336219 PZPP20742 1482 aa27.46■■□□□ 1.99
CDCA4-201ENST00000336219 PLB1Q6P1J6 1458 aa27.45■■□□□ 1.98
CDCA4-201ENST00000336219 GPATCH8Q9UKJ3 1502 aaKnown RBP27.44■■□□□ 1.98
CDCA4-201ENST00000336219 SPATA31E1Q6ZUB1 1445 aa27.44■■□□□ 1.98
CDCA4-201ENST00000336219 KIF14Q15058 1648 aa27.44■■□□□ 1.98
CDCA4-201ENST00000336219 CROCC2H7BZ55 1655 aa27.44■■□□□ 1.98
CDCA4-201ENST00000336219 CFDP1Q9UEE9 299 aaPredicted RBP27.43■■□□□ 1.98
CDCA4-201ENST00000336219 FAM9BQ8IZU0 186 aa27.42■■□□□ 1.98
CDCA4-201ENST00000336219 SYNJ2O15056 1496 aa27.42■■□□□ 1.98
CDCA4-201ENST00000336219 ADGRL2O95490 1459 aa27.4■■□□□ 1.98
CDCA4-201ENST00000336219 PRKRIP1Q9H875 184 aaPredicted RBP27.4■■□□□ 1.98
CDCA4-201ENST00000336219 FANCIQ9NVI1 1328 aa27.39■■□□□ 1.98
CDCA4-201ENST00000336219 CHMP7Q8WUX9 453 aaPredicted RBP27.38■■□□□ 1.97
CDCA4-201ENST00000336219 KIF7Q2M1P5 1343 aa27.35■■□□□ 1.97
CDCA4-201ENST00000336219 MBD5Q9P267 1494 aa27.34■■□□□ 1.97
CDCA4-201ENST00000336219 CARMIL2Q6F5E8 1435 aa27.33■■□□□ 1.97
CDCA4-201ENST00000336219 PPP4R2Q9NY27 417 aa27.33■■□□□ 1.97
CDCA4-201ENST00000336219 KIAA1107Q9UPP5 1409 aa27.33■■□□□ 1.97
CDCA4-201ENST00000336219 ERCC6Q03468 1493 aa27.33■■□□□ 1.97
CDCA4-201ENST00000336219 B4GALNT3Q6L9W6 998 aa27.33■■□□□ 1.97
CDCA4-201ENST00000336219 MRS2Q9HD23 443 aa27.33■■□□□ 1.97
CDCA4-201ENST00000336219 NUP160Q12769 1436 aa27.31■■□□□ 1.96
CDCA4-201ENST00000336219 ZNF777Q9ULD5 760 aaPredicted RBP27.31■■□□□ 1.96
CDCA4-201ENST00000336219 ANKRD30AQ9BXX3 1397 aa27.29■■□□□ 1.96
CDCA4-201ENST00000336219 ERICH6Q7L0X2 663 aa27.29■■□□□ 1.96
CDCA4-201ENST00000336219 CDC42BPAQ5VT25 1732 aa27.29■■□□□ 1.96
CDCA4-201ENST00000336219 JPH4Q96JJ6 628 aa27.27■■□□□ 1.96
CDCA4-201ENST00000336219 FBLN2P98095 1184 aa27.25■■□□□ 1.95
CDCA4-201ENST00000336219 CNGB1Q14028 1251 aaPredicted RBP27.25■■□□□ 1.95
CDCA4-201ENST00000336219 ABCA8O94911 1581 aa27.24■■□□□ 1.95
CDCA4-201ENST00000336219 ANKRD50Q9ULJ7 1429 aa27.24■■□□□ 1.95
CDCA4-201ENST00000336219 PKD2Q13563 968 aa27.23■■□□□ 1.95
CDCA4-201ENST00000336219 ERICH6BQ5W0A0 696 aa27.23■■□□□ 1.95
CDCA4-201ENST00000336219 BCORL1Q5H9F3 1711 aa27.22■■□□□ 1.95
CDCA4-201ENST00000336219 ZBED9Q6R2W3 1325 aa27.22■■□□□ 1.95
CDCA4-201ENST00000336219 ABCC10Q5T3U5 1492 aa27.21■■□□□ 1.95
CDCA4-201ENST00000336219 SHANK2Q9UPX8 1470 aa27.21■■□□□ 1.95
CDCA4-201ENST00000336219 USP47Q96K76 1375 aa27.19■■□□□ 1.94
CDCA4-201ENST00000336219 KDM5CP41229 1560 aa27.18■■□□□ 1.94
CDCA4-201ENST00000336219 PLEKHD1A6NEE1 506 aa27.18■■□□□ 1.94
CDCA4-201ENST00000336219 ATP10BO94823 1461 aa27.18■■□□□ 1.94
CDCA4-201ENST00000336219 C9orf84Q5VXU9 1444 aa27.17■■□□□ 1.94
CDCA4-201ENST00000336219 DHX29Q7Z478 1369 aaKnown RBP27.15■■□□□ 1.94
CDCA4-201ENST00000336219 SENP3-EIF4A1A0A087X0R7 540 aa27.15■■□□□ 1.94
CDCA4-201ENST00000336219 UHRF1BP1Q6BDS2 1440 aa27.14■■□□□ 1.93
CDCA4-201ENST00000336219 KDM5DQ9BY66 1539 aa27.13■■□□□ 1.93
CDCA4-201ENST00000336219 ZNF326Q5BKZ1 582 aaKnown RBP27.13■■□□□ 1.93
CDCA4-201ENST00000336219 NUP155O75694 1391 aa27.12■■□□□ 1.93
CDCA4-201ENST00000336219 RALGAPBQ86X10 1494 aa27.11■■□□□ 1.93
CDCA4-201ENST00000336219 ARID4BQ4LE39 1312 aaPredicted RBP27.1■■□□□ 1.93
CDCA4-201ENST00000336219 ARHGEF12Q9NZN5 1544 aa27.1■■□□□ 1.93
CDCA4-201ENST00000336219 POLR3GLQ9BT43 218 aa27.09■■□□□ 1.93
CDCA4-201ENST00000336219 ARHGEF5Q12774 1597 aa27.07■■□□□ 1.92
CDCA4-201ENST00000336219 TSPY4P0CV99 314 aa27.05■■□□□ 1.92
CDCA4-201ENST00000336219 TSPY10P0CW01 314 aa27.05■■□□□ 1.92
CDCA4-201ENST00000336219 PTPRGP23470 1445 aa27.04■■□□□ 1.92
CDCA4-201ENST00000336219 KIF15Q9NS87 1388 aa27.03■■□□□ 1.92
CDCA4-201ENST00000336219 ROCK2O75116 1388 aaKnown RBP27■■□□□ 1.91
CDCA4-201ENST00000336219 CDC42BPBQ9Y5S2 1711 aa26.99■■□□□ 1.91
CDCA4-201ENST00000336219 HNRNPMP52272 730 aaKnown RBP eCLIP26.98■■□□□ 1.911e-7■■■■□ 25.8
CDCA4-201ENST00000336219 CARD11Q9BXL7 1154 aa26.98■■□□□ 1.91
CDCA4-201ENST00000336219 SAMD9LQ8IVG5 1584 aa26.97■■□□□ 1.91
CDCA4-201ENST00000336219 PREX2Q70Z35 1606 aa26.97■■□□□ 1.91
CDCA4-201ENST00000336219 PAK3O75914 559 aaPredicted RBP26.95■■□□□ 1.91
CDCA4-201ENST00000336219 SMG6Q86US8 1419 aaKnown RBP26.95■■□□□ 1.91
CDCA4-201ENST00000336219 CCDC141Q6ZP82 1450 aa26.95■■□□□ 1.91
CDCA4-201ENST00000336219 NUDCQ9Y266 331 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms