RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
RC3H2-201ENST00000335387 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
RC3H2-201ENST00000335387 ADGRL2O95490 1459 aa19■□□□□ 0.63
RC3H2-201ENST00000335387 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
RC3H2-201ENST00000335387 RPRD2Q5VT52 1461 aaKnown RBP18.98■□□□□ 0.63
RC3H2-201ENST00000335387 TEX14Q8IWB6 1497 aa18.98■□□□□ 0.63
RC3H2-201ENST00000335387 ABCC5O15440 1437 aa18.98■□□□□ 0.63
RC3H2-201ENST00000335387 DDX10Q13206 875 aaKnown RBP18.96■□□□□ 0.63
RC3H2-201ENST00000335387 KCNH8Q96L42 1107 aa18.95■□□□□ 0.62
RC3H2-201ENST00000335387 NUP160Q12769 1436 aa18.93■□□□□ 0.62
RC3H2-201ENST00000335387 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
RC3H2-201ENST00000335387 MBD5Q9P267 1494 aa18.92■□□□□ 0.62
RC3H2-201ENST00000335387 TROQ12816 1431 aaPredicted RBP18.92■□□□□ 0.62
RC3H2-201ENST00000335387 ABCA8O94911 1581 aa18.9■□□□□ 0.62
RC3H2-201ENST00000335387 NCOA1Q15788 1441 aa18.89■□□□□ 0.61
RC3H2-201ENST00000335387 SHANK2Q9UPX8 1470 aa18.89■□□□□ 0.61
RC3H2-201ENST00000335387 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.61
RC3H2-201ENST00000335387 CAMSAP2Q08AD1 1489 aa18.88■□□□□ 0.61
RC3H2-201ENST00000335387 CDC42BPAQ5VT25 1732 aa18.88■□□□□ 0.61
RC3H2-201ENST00000335387 SPATA31E1Q6ZUB1 1445 aa18.88■□□□□ 0.61
RC3H2-201ENST00000335387 PZPP20742 1482 aa18.88■□□□□ 0.61
RC3H2-201ENST00000335387 ANP32CO43423 234 aa18.87■□□□□ 0.61
RC3H2-201ENST00000335387 KIF14Q15058 1648 aa18.87■□□□□ 0.61
RC3H2-201ENST00000335387 GPATCH8Q9UKJ3 1502 aaKnown RBP18.86■□□□□ 0.61
RC3H2-201ENST00000335387 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
RC3H2-201ENST00000335387 CNTLNQ9NXG0 1405 aa18.85■□□□□ 0.61
RC3H2-201ENST00000335387 ABCC10Q5T3U5 1492 aa18.82■□□□□ 0.6
RC3H2-201ENST00000335387 ARHGEF5Q12774 1597 aa18.81■□□□□ 0.6
RC3H2-201ENST00000335387 WASHC2AQ641Q2 1341 aa18.81■□□□□ 0.6
RC3H2-201ENST00000335387 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
RC3H2-201ENST00000335387 SHROOM2Q13796 1616 aa18.79■□□□□ 0.6
RC3H2-201ENST00000335387 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
RC3H2-201ENST00000335387 CDK11AQ9UQ88 783 aaPredicted RBP18.77■□□□□ 0.6
RC3H2-201ENST00000335387 HSPA5P11021 654 aaKnown RBP18.76■□□□□ 0.59
RC3H2-201ENST00000335387 ARHGEF12Q9NZN5 1544 aa18.76■□□□□ 0.59
RC3H2-201ENST00000335387 PRG4Q92954 1404 aaPredicted RBP18.76■□□□□ 0.59
RC3H2-201ENST00000335387 PLB1Q6P1J6 1458 aa18.76■□□□□ 0.59
RC3H2-201ENST00000335387 UHRF1BP1Q6BDS2 1440 aa18.75■□□□□ 0.59
RC3H2-201ENST00000335387 CARMIL2Q6F5E8 1435 aa18.75■□□□□ 0.59
RC3H2-201ENST00000335387 CCDC7Q96M83 1385 aa18.75■□□□□ 0.59
RC3H2-201ENST00000335387 KDM5CP41229 1560 aa18.75■□□□□ 0.59
RC3H2-201ENST00000335387 TSHZ2Q9NRE2 1034 aa18.75■□□□□ 0.59
RC3H2-201ENST00000335387 KIAA1107Q9UPP5 1409 aa18.74■□□□□ 0.59
RC3H2-201ENST00000335387 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.59
RC3H2-201ENST00000335387 PTPRGP23470 1445 aa18.73■□□□□ 0.59
RC3H2-201ENST00000335387 L3MBTL2Q969R5 705 aa18.72■□□□□ 0.59
RC3H2-201ENST00000335387 HIRIP3Q9BW71 556 aaPredicted RBP18.71■□□□□ 0.59
RC3H2-201ENST00000335387 PREX2Q70Z35 1606 aa18.71■□□□□ 0.59
RC3H2-201ENST00000335387 CHIC2Q9UKJ5 165 aa18.71■□□□□ 0.59
RC3H2-201ENST00000335387 MAST1Q9Y2H9 1570 aa18.71■□□□□ 0.59
RC3H2-201ENST00000335387 BCORL1Q5H9F3 1711 aa18.69■□□□□ 0.58
RC3H2-201ENST00000335387 ATP10BO94823 1461 aa18.67■□□□□ 0.58
RC3H2-201ENST00000335387 E9PCH4 1651 aa18.67■□□□□ 0.58
RC3H2-201ENST00000335387 CDC42BPBQ9Y5S2 1711 aa18.67■□□□□ 0.58
RC3H2-201ENST00000335387 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
RC3H2-201ENST00000335387 RALGAPBQ86X10 1494 aa18.66■□□□□ 0.58
RC3H2-201ENST00000335387 ZNF644Q9H582 1327 aaPredicted RBP18.66■□□□□ 0.58
RC3H2-201ENST00000335387 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
RC3H2-201ENST00000335387 ANKRD30AQ9BXX3 1397 aa18.65■□□□□ 0.58
RC3H2-201ENST00000335387 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
RC3H2-201ENST00000335387 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
RC3H2-201ENST00000335387 UNC13BO14795 1591 aa18.64■□□□□ 0.57
RC3H2-201ENST00000335387 LAMC1P11047 1609 aa18.63■□□□□ 0.57
RC3H2-201ENST00000335387 FBLN2P98095 1184 aa18.62■□□□□ 0.57
RC3H2-201ENST00000335387 FKBP8Q14318 412 aa18.61■□□□□ 0.57
RC3H2-201ENST00000335387 ANKRD50Q9ULJ7 1429 aa18.61■□□□□ 0.57
RC3H2-201ENST00000335387 SAMD9LQ8IVG5 1584 aa18.61■□□□□ 0.57
RC3H2-201ENST00000335387 C9orf84Q5VXU9 1444 aa18.6■□□□□ 0.57
RC3H2-201ENST00000335387 C11orf95C9JLR9 678 aaPredicted RBP18.6■□□□□ 0.57
RC3H2-201ENST00000335387 PLXNC1O60486 1568 aa18.6■□□□□ 0.57
RC3H2-201ENST00000335387 PRKRIP1Q9H875 184 aaPredicted RBP18.59■□□□□ 0.57
RC3H2-201ENST00000335387 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
RC3H2-201ENST00000335387 CFDP1Q9UEE9 299 aaPredicted RBP18.58■□□□□ 0.57
RC3H2-201ENST00000335387 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
RC3H2-201ENST00000335387 JPH4Q96JJ6 628 aa18.57■□□□□ 0.56
RC3H2-201ENST00000335387 SLC4A1APQ9BWU0 796 aaKnown RBP18.57■□□□□ 0.56
RC3H2-201ENST00000335387 NEFLP07196 543 aa18.55■□□□□ 0.56
RC3H2-201ENST00000335387 TRPM1Q7Z4N2 1603 aa18.54■□□□□ 0.56
RC3H2-201ENST00000335387 IQGAP3Q86VI3 1631 aa18.54■□□□□ 0.56
RC3H2-201ENST00000335387 FOXD1Q16676 465 aa18.54■□□□□ 0.56
RC3H2-201ENST00000335387 ZBED9Q6R2W3 1325 aa18.53■□□□□ 0.56
RC3H2-201ENST00000335387 CCDC141Q6ZP82 1450 aa18.53■□□□□ 0.56
RC3H2-201ENST00000335387 MAGI2Q86UL8 1455 aa18.53■□□□□ 0.56
RC3H2-201ENST00000335387 ROCK2O75116 1388 aaKnown RBP18.52■□□□□ 0.55
RC3H2-201ENST00000335387 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
RC3H2-201ENST00000335387 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
RC3H2-201ENST00000335387 FAM135AQ9P2D6 1515 aa18.5■□□□□ 0.55
RC3H2-201ENST00000335387 USP47Q96K76 1375 aa18.49■□□□□ 0.55
RC3H2-201ENST00000335387 ATP10AO60312 1499 aa18.48■□□□□ 0.55
RC3H2-201ENST00000335387 KTN1Q86UP2 1357 aaKnown RBP18.48■□□□□ 0.55
RC3H2-201ENST00000335387 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
RC3H2-201ENST00000335387 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
RC3H2-201ENST00000335387 RSPH4AQ5TD94 716 aa18.46■□□□□ 0.55
RC3H2-201ENST00000335387 PLEKHD1A6NEE1 506 aa18.45■□□□□ 0.54
RC3H2-201ENST00000335387 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
RC3H2-201ENST00000335387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.45■□□□□ 0.54
RC3H2-201ENST00000335387 RNF17Q9BXT8 1623 aaKnown RBP18.44■□□□□ 0.54
RC3H2-201ENST00000335387 PLEKHH2Q8IVE3 1493 aa18.44■□□□□ 0.54
RC3H2-201ENST00000335387 ABCC2Q92887 1545 aa18.44■□□□□ 0.54
RC3H2-201ENST00000335387 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms