RNA–Protein interactions for RNA: ENST00000330459.7

KPNA2-201, Transcript of karyopherin subunit alpha 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA2, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA2-201ENST00000330459 DNMT1P26358 1616 aaKnown RBP13.87□□□□□ -0.19
KPNA2-201ENST00000330459 ADCY10Q96PN6 1610 aa13.87□□□□□ -0.19
KPNA2-201ENST00000330459 TONSLQ96HA7 1378 aa13.87□□□□□ -0.19
KPNA2-201ENST00000330459 GPATCH8Q9UKJ3 1502 aaKnown RBP13.87□□□□□ -0.19
KPNA2-201ENST00000330459 CHD1O14646 1710 aa13.85□□□□□ -0.19
KPNA2-201ENST00000330459 ITSN2Q9NZM3 1697 aa13.85□□□□□ -0.19
KPNA2-201ENST00000330459 MPHOSPH9Q99550 1183 aa13.83□□□□□ -0.19
KPNA2-201ENST00000330459 KIF14Q15058 1648 aa13.83□□□□□ -0.2
KPNA2-201ENST00000330459 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
KPNA2-201ENST00000330459 KDM6BO15054 1643 aa13.82□□□□□ -0.2
KPNA2-201ENST00000330459 ZNF777Q9ULD5 760 aaPredicted RBP13.82□□□□□ -0.2
KPNA2-201ENST00000330459 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
KPNA2-201ENST00000330459 SHROOM2Q13796 1616 aa13.8□□□□□ -0.2
KPNA2-201ENST00000330459 ABCC10Q5T3U5 1492 aa13.79□□□□□ -0.2
KPNA2-201ENST00000330459 DENND4BO75064 1496 aaPredicted RBP13.79□□□□□ -0.2
KPNA2-201ENST00000330459 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
KPNA2-201ENST00000330459 YTHDC1Q96MU7 727 aaKnown RBP13.78□□□□□ -0.2
KPNA2-201ENST00000330459 ADGRL2O95490 1459 aa13.76□□□□□ -0.21
KPNA2-201ENST00000330459 CDC42BPAQ5VT25 1732 aa13.75□□□□□ -0.21
KPNA2-201ENST00000330459 ANKRD30AQ9BXX3 1397 aa13.75□□□□□ -0.21
KPNA2-201ENST00000330459 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
KPNA2-201ENST00000330459 ADGBQ8N7X0 1667 aa13.73□□□□□ -0.21
KPNA2-201ENST00000330459 TSPY4P0CV99 314 aa13.72□□□□□ -0.21
KPNA2-201ENST00000330459 TSPY10P0CW01 314 aa13.72□□□□□ -0.21
KPNA2-201ENST00000330459 CROCC2H7BZ55 1655 aa13.72□□□□□ -0.21
KPNA2-201ENST00000330459 ANKRD30BQ9BXX2 1392 aa13.72□□□□□ -0.21
KPNA2-201ENST00000330459 FOXD1Q16676 465 aa13.72□□□□□ -0.21
KPNA2-201ENST00000330459 KDM5BQ9UGL1 1544 aa13.71□□□□□ -0.21
KPNA2-201ENST00000330459 DDX10Q13206 875 aaKnown RBP13.71□□□□□ -0.22
KPNA2-201ENST00000330459 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.22
KPNA2-201ENST00000330459 SHANK2Q9UPX8 1470 aa13.7□□□□□ -0.22
KPNA2-201ENST00000330459 ERCC6L2Q5T890 1561 aa13.7□□□□□ -0.22
KPNA2-201ENST00000330459 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
KPNA2-201ENST00000330459 ABCC2Q92887 1545 aa13.7□□□□□ -0.22
KPNA2-201ENST00000330459 HIRIP3Q9BW71 556 aaPredicted RBP13.69□□□□□ -0.22
KPNA2-201ENST00000330459 CLASP1Q7Z460 1538 aa13.69□□□□□ -0.22
KPNA2-201ENST00000330459 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
KPNA2-201ENST00000330459 HNRNPMP52272 730 aaKnown RBP eCLIP13.69□□□□□ -0.22
KPNA2-201ENST00000330459 ANKRD50Q9ULJ7 1429 aa13.68□□□□□ -0.22
KPNA2-201ENST00000330459 L3MBTL2Q969R5 705 aa13.68□□□□□ -0.22
KPNA2-201ENST00000330459 RPRD2Q5VT52 1461 aaKnown RBP13.68□□□□□ -0.22
KPNA2-201ENST00000330459 PZPP20742 1482 aa13.67□□□□□ -0.22
KPNA2-201ENST00000330459 ARHGEF5Q12774 1597 aa13.67□□□□□ -0.22
KPNA2-201ENST00000330459 GTF3C3Q9Y5Q9 886 aa13.66□□□□□ -0.22
KPNA2-201ENST00000330459 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
KPNA2-201ENST00000330459 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
KPNA2-201ENST00000330459 PHF23Q9BUL5 403 aaPredicted RBP13.65□□□□□ -0.22
KPNA2-201ENST00000330459 CDC42BPBQ9Y5S2 1711 aa13.64□□□□□ -0.23
KPNA2-201ENST00000330459 UHRF1BP1LA0JNW5 1464 aa13.64□□□□□ -0.23
KPNA2-201ENST00000330459 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
KPNA2-201ENST00000330459 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
KPNA2-201ENST00000330459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.63□□□□□ -0.23
KPNA2-201ENST00000330459 PKD2Q13563 968 aa13.63□□□□□ -0.23
KPNA2-201ENST00000330459 SAMD9LQ8IVG5 1584 aa13.63□□□□□ -0.23
KPNA2-201ENST00000330459 KIF15Q9NS87 1388 aa13.62□□□□□ -0.23
KPNA2-201ENST00000330459 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.23
KPNA2-201ENST00000330459 KCNH8Q96L42 1107 aa13.62□□□□□ -0.23
KPNA2-201ENST00000330459 NUP155O75694 1391 aa13.62□□□□□ -0.23
KPNA2-201ENST00000330459 ARHGAP5Q13017 1502 aa13.61□□□□□ -0.23
KPNA2-201ENST00000330459 TTC37Q6PGP7 1564 aa13.61□□□□□ -0.23
KPNA2-201ENST00000330459 HSPA5P11021 654 aaKnown RBP13.6□□□□□ -0.23
KPNA2-201ENST00000330459 PLEKHH2Q8IVE3 1493 aa13.6□□□□□ -0.23
KPNA2-201ENST00000330459 TEX14Q8IWB6 1497 aa13.6□□□□□ -0.23
KPNA2-201ENST00000330459 ANP32CO43423 234 aa13.59□□□□□ -0.23
KPNA2-201ENST00000330459 ZCCHC11Q5TAX3 1644 aaKnown RBP13.58□□□□□ -0.24
KPNA2-201ENST00000330459 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
KPNA2-201ENST00000330459 KDM5DQ9BY66 1539 aa13.57□□□□□ -0.24
KPNA2-201ENST00000330459 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
KPNA2-201ENST00000330459 PLCH2O75038 1416 aa13.57□□□□□ -0.24
KPNA2-201ENST00000330459 SYCP2Q9BX26 1530 aa13.57□□□□□ -0.24
KPNA2-201ENST00000330459 EFCAB2Q5VUJ9 269 aa13.56□□□□□ -0.24
KPNA2-201ENST00000330459 MAST1Q9Y2H9 1570 aa13.56□□□□□ -0.24
KPNA2-201ENST00000330459 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
KPNA2-201ENST00000330459 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
KPNA2-201ENST00000330459 MYT1Q01538 1121 aa13.52□□□□□ -0.24
KPNA2-201ENST00000330459 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
KPNA2-201ENST00000330459 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
KPNA2-201ENST00000330459 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
KPNA2-201ENST00000330459 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
KPNA2-201ENST00000330459 SPATA31E1Q6ZUB1 1445 aa13.48□□□□□ -0.25
KPNA2-201ENST00000330459 ARAP3Q8WWN8 1544 aa13.47□□□□□ -0.25
KPNA2-201ENST00000330459 DUOX2Q9NRD8 1548 aa13.47□□□□□ -0.25
KPNA2-201ENST00000330459 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
KPNA2-201ENST00000330459 CCDC7Q96M83 1385 aa13.46□□□□□ -0.25
KPNA2-201ENST00000330459 ABCC1P33527 1531 aa13.46□□□□□ -0.25
KPNA2-201ENST00000330459 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.25
KPNA2-201ENST00000330459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.252e-7■■■□□ 16.2
KPNA2-201ENST00000330459 UHRF1BP1Q6BDS2 1440 aa13.46□□□□□ -0.25
KPNA2-201ENST00000330459 UNC13BO14795 1591 aa13.46□□□□□ -0.26
KPNA2-201ENST00000330459 ZNF326Q5BKZ1 582 aaKnown RBP13.45□□□□□ -0.26
KPNA2-201ENST00000330459 ERBINQ96RT1 1412 aa13.45□□□□□ -0.26
KPNA2-201ENST00000330459 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
KPNA2-201ENST00000330459 RTEL1-TNFRSF6BF6WH68 1400 aa13.44□□□□□ -0.26
KPNA2-201ENST00000330459 SPAG9O60271 1321 aaKnown RBP13.44□□□□□ -0.26
KPNA2-201ENST00000330459 CNTLNQ9NXG0 1405 aa13.43□□□□□ -0.26
KPNA2-201ENST00000330459 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
KPNA2-201ENST00000330459 CCDC144AA2RUR9 1427 aa13.42□□□□□ -0.26
KPNA2-201ENST00000330459 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
KPNA2-201ENST00000330459 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
KPNA2-201ENST00000330459 USP47Q96K76 1375 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms