RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 ABCC5O15440 1437 aa22.55■■□□□ 1.2
SMARCD2-202ENST00000323347 ADCY10Q96PN6 1610 aa22.55■■□□□ 1.2
SMARCD2-202ENST00000323347 CHIC2Q9UKJ5 165 aa22.53■■□□□ 1.2
SMARCD2-202ENST00000323347 JPH4Q96JJ6 628 aa22.51■■□□□ 1.19
SMARCD2-202ENST00000323347 PLB1Q6P1J6 1458 aa22.5■■□□□ 1.19
SMARCD2-202ENST00000323347 ITSN2Q9NZM3 1697 aa22.49■■□□□ 1.19
SMARCD2-202ENST00000323347 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
SMARCD2-202ENST00000323347 ARID3CA6NKF2 412 aa22.48■■□□□ 1.19
SMARCD2-202ENST00000323347 ABCA8O94911 1581 aa22.47■■□□□ 1.19
SMARCD2-202ENST00000323347 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
SMARCD2-202ENST00000323347 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
SMARCD2-202ENST00000323347 DDX10Q13206 875 aaKnown RBP22.45■■□□□ 1.18
SMARCD2-202ENST00000323347 TRIM52Q96A61 297 aa22.43■■□□□ 1.18
SMARCD2-202ENST00000323347 ADGRL2O95490 1459 aa22.42■■□□□ 1.18
SMARCD2-202ENST00000323347 CAMSAP2Q08AD1 1489 aa22.42■■□□□ 1.18
SMARCD2-202ENST00000323347 ZNF644Q9H582 1327 aaPredicted RBP22.42■■□□□ 1.18
SMARCD2-202ENST00000323347 KIF14Q15058 1648 aa22.39■■□□□ 1.18
SMARCD2-202ENST00000323347 ANKRD30BQ9BXX2 1392 aa22.39■■□□□ 1.18
SMARCD2-202ENST00000323347 CCER2I3L3R5 266 aa22.39■■□□□ 1.17
SMARCD2-202ENST00000323347 FBLN2P98095 1184 aa22.39■■□□□ 1.17
SMARCD2-202ENST00000323347 ADGBQ8N7X0 1667 aa22.38■■□□□ 1.17
SMARCD2-202ENST00000323347 CFDP1Q9UEE9 299 aaPredicted RBP22.37■■□□□ 1.17
SMARCD2-202ENST00000323347 NCOA1Q15788 1441 aa22.37■■□□□ 1.17
SMARCD2-202ENST00000323347 ATP10BO94823 1461 aa22.36■■□□□ 1.17
SMARCD2-202ENST00000323347 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
SMARCD2-202ENST00000323347 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
SMARCD2-202ENST00000323347 RPRD2Q5VT52 1461 aaKnown RBP22.36■■□□□ 1.17
SMARCD2-202ENST00000323347 TRHP20396 242 aaPredicted RBP22.35■■□□□ 1.17
SMARCD2-202ENST00000323347 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.17
SMARCD2-202ENST00000323347 HIRIP3Q9BW71 556 aaPredicted RBP22.31■■□□□ 1.16
SMARCD2-202ENST00000323347 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
SMARCD2-202ENST00000323347 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
SMARCD2-202ENST00000323347 PZPP20742 1482 aa22.31■■□□□ 1.16
SMARCD2-202ENST00000323347 SHANK2Q9UPX8 1470 aa22.31■■□□□ 1.16
SMARCD2-202ENST00000323347 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
SMARCD2-202ENST00000323347 CDC42BPAQ5VT25 1732 aa22.29■■□□□ 1.16
SMARCD2-202ENST00000323347 TEX14Q8IWB6 1497 aa22.29■■□□□ 1.16
SMARCD2-202ENST00000323347 L3MBTL2Q969R5 705 aa22.29■■□□□ 1.16
SMARCD2-202ENST00000323347 ANP32CO43423 234 aa22.28■■□□□ 1.16
SMARCD2-202ENST00000323347 ANKRD30AQ9BXX3 1397 aa22.26■■□□□ 1.15
SMARCD2-202ENST00000323347 SLC4A1APQ9BWU0 796 aaKnown RBP22.24■■□□□ 1.15
SMARCD2-202ENST00000323347 PTPRGP23470 1445 aa22.24■■□□□ 1.15
SMARCD2-202ENST00000323347 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
SMARCD2-202ENST00000323347 SHROOM2Q13796 1616 aa22.23■■□□□ 1.15
SMARCD2-202ENST00000323347 EIF4G2P78344 907 aaKnown RBP eCLIP22.22■■□□□ 1.15
SMARCD2-202ENST00000323347 FOXD1Q16676 465 aa22.22■■□□□ 1.15
SMARCD2-202ENST00000323347 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
SMARCD2-202ENST00000323347 KIAA1107Q9UPP5 1409 aa22.21■■□□□ 1.15
SMARCD2-202ENST00000323347 WASHC2AQ641Q2 1341 aa22.19■■□□□ 1.14
SMARCD2-202ENST00000323347 ANKRD50Q9ULJ7 1429 aa22.18■■□□□ 1.14
SMARCD2-202ENST00000323347 KDM5DQ9BY66 1539 aa22.18■■□□□ 1.14
SMARCD2-202ENST00000323347 C9orf84Q5VXU9 1444 aa22.17■■□□□ 1.14
SMARCD2-202ENST00000323347 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
SMARCD2-202ENST00000323347 CHD1O14646 1710 aa22.17■■□□□ 1.14
SMARCD2-202ENST00000323347 MBD5Q9P267 1494 aa22.16■■□□□ 1.14
SMARCD2-202ENST00000323347 SPATA31E1Q6ZUB1 1445 aa22.15■■□□□ 1.14
SMARCD2-202ENST00000323347 NBPF8Q3BBV2 869 aa22.15■■□□□ 1.14
SMARCD2-202ENST00000323347 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
SMARCD2-202ENST00000323347 PREX2Q70Z35 1606 aa22.12■■□□□ 1.13
SMARCD2-202ENST00000323347 RSPH4AQ5TD94 716 aa22.11■■□□□ 1.13
SMARCD2-202ENST00000323347 CNTLNQ9NXG0 1405 aa22.09■■□□□ 1.13
SMARCD2-202ENST00000323347 CCDC7Q96M83 1385 aa22.09■■□□□ 1.13
SMARCD2-202ENST00000323347 CDC42BPBQ9Y5S2 1711 aa22.08■■□□□ 1.13
SMARCD2-202ENST00000323347 TSPY4P0CV99 314 aa22.08■■□□□ 1.13
SMARCD2-202ENST00000323347 TSPY10P0CW01 314 aa22.08■■□□□ 1.13
SMARCD2-202ENST00000323347 SAMD9LQ8IVG5 1584 aa22.08■■□□□ 1.13
SMARCD2-202ENST00000323347 POLR1AO95602 1720 aaPredicted RBP22.07■■□□□ 1.12
SMARCD2-202ENST00000323347 PKD2Q13563 968 aa22.07■■□□□ 1.12
SMARCD2-202ENST00000323347 CCDC141Q6ZP82 1450 aa22.07■■□□□ 1.12
SMARCD2-202ENST00000323347 UHRF1BP1Q6BDS2 1440 aa22.05■■□□□ 1.12
SMARCD2-202ENST00000323347 MAST1Q9Y2H9 1570 aa22.05■■□□□ 1.12
SMARCD2-202ENST00000323347 ABCC2Q92887 1545 aa22.05■■□□□ 1.12
SMARCD2-202ENST00000323347 KIF15Q9NS87 1388 aa22.03■■□□□ 1.12
SMARCD2-202ENST00000323347 C11orf95C9JLR9 678 aaPredicted RBP22.03■■□□□ 1.12
SMARCD2-202ENST00000323347 NUP155O75694 1391 aa22.02■■□□□ 1.12
SMARCD2-202ENST00000323347 ARHGEF12Q9NZN5 1544 aa22.02■■□□□ 1.12
SMARCD2-202ENST00000323347 HNRNPMP52272 730 aaKnown RBP eCLIP22.01■■□□□ 1.11
SMARCD2-202ENST00000323347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22■■□□□ 1.11
SMARCD2-202ENST00000323347 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
SMARCD2-202ENST00000323347 UHRF1BP1LA0JNW5 1464 aa21.97■■□□□ 1.11
SMARCD2-202ENST00000323347 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
SMARCD2-202ENST00000323347 TTC37Q6PGP7 1564 aa21.97■■□□□ 1.11
SMARCD2-202ENST00000323347 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
SMARCD2-202ENST00000323347 KIF7Q2M1P5 1343 aa21.96■■□□□ 1.11
SMARCD2-202ENST00000323347 ARID4BQ4LE39 1312 aaPredicted RBP21.95■■□□□ 1.1
SMARCD2-202ENST00000323347 RALGAPBQ86X10 1494 aa21.95■■□□□ 1.1
SMARCD2-202ENST00000323347 UNC13BO14795 1591 aa21.92■■□□□ 1.1
SMARCD2-202ENST00000323347 PLXNC1O60486 1568 aa21.92■■□□□ 1.1
SMARCD2-202ENST00000323347 KDM5CP41229 1560 aa21.92■■□□□ 1.1
SMARCD2-202ENST00000323347 PRKRIP1Q9H875 184 aaPredicted RBP21.92■■□□□ 1.1
SMARCD2-202ENST00000323347 ARHGAP5Q13017 1502 aa21.92■■□□□ 1.1
SMARCD2-202ENST00000323347 SYCP2Q9BX26 1530 aa21.92■■□□□ 1.1
SMARCD2-202ENST00000323347 MYO5CQ9NQX4 1742 aa21.92■■□□□ 1.1
SMARCD2-202ENST00000323347 FAM135AQ9P2D6 1515 aa21.91■■□□□ 1.1
SMARCD2-202ENST00000323347 USP47Q96K76 1375 aa21.9■■□□□ 1.1
SMARCD2-202ENST00000323347 PLCH2O75038 1416 aa21.87■■□□□ 1.09
SMARCD2-202ENST00000323347 BCORL1Q5H9F3 1711 aa21.86■■□□□ 1.09
SMARCD2-202ENST00000323347 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
SMARCD2-202ENST00000323347 IQGAP3Q86VI3 1631 aa21.83■■□□□ 1.09
SMARCD2-202ENST00000323347 MAGI2Q86UL8 1455 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms