RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
RAPH1-202ENST00000319170 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
RAPH1-202ENST00000319170 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
RAPH1-202ENST00000319170 GZF1Q9H116 711 aaPredicted RBP17.9■□□□□ 0.46
RAPH1-202ENST00000319170 GBP4Q96PP9 640 aa17.89■□□□□ 0.45
RAPH1-202ENST00000319170 MORC1Q86VD1 984 aa17.89■□□□□ 0.45
RAPH1-202ENST00000319170 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
RAPH1-202ENST00000319170 KIF27Q86VH2 1401 aa17.87■□□□□ 0.45
RAPH1-202ENST00000319170 DCAF11Q8TEB1 546 aa17.87■□□□□ 0.45
RAPH1-202ENST00000319170 PRM3Q9NNZ6 103 aa17.87■□□□□ 0.45
RAPH1-202ENST00000319170 SAFB2Q14151 953 aaKnown RBP eCLIP17.86■□□□□ 0.45
RAPH1-202ENST00000319170 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
RAPH1-202ENST00000319170 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
RAPH1-202ENST00000319170 A0A0U1RQG5 324 aaPredicted RBP17.83■□□□□ 0.45
RAPH1-202ENST00000319170 TPM4P67936 248 aa17.83■□□□□ 0.45
RAPH1-202ENST00000319170 ITPRIPQ8IWB1 547 aa17.83■□□□□ 0.44
RAPH1-202ENST00000319170 KTN1Q86UP2 1357 aaKnown RBP17.83■□□□□ 0.44
RAPH1-202ENST00000319170 SYAP1Q96A49 352 aaPredicted RBP17.83■□□□□ 0.44
RAPH1-202ENST00000319170 PDE4CQ08493 712 aa17.82■□□□□ 0.44
RAPH1-202ENST00000319170 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
RAPH1-202ENST00000319170 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
RAPH1-202ENST00000319170 GOLGA6L1Q8N7Z2 621 aa17.8■□□□□ 0.44
RAPH1-202ENST00000319170 IPO8O15397 1037 aaKnown RBP17.8■□□□□ 0.44
RAPH1-202ENST00000319170 HTATSF1O43719 755 aaKnown RBP17.8■□□□□ 0.44
RAPH1-202ENST00000319170 GPATCH3Q96I76 525 aa17.79■□□□□ 0.44
RAPH1-202ENST00000319170 SLKQ9H2G2 1235 aaPredicted RBP17.79■□□□□ 0.44
RAPH1-202ENST00000319170 TNNT3P45378 269 aaPredicted RBP17.79■□□□□ 0.44
RAPH1-202ENST00000319170 ZNF330Q9Y3S2 320 aaPredicted RBP17.79■□□□□ 0.44
RAPH1-202ENST00000319170 ARHGAP35Q9NRY4 1499 aa17.77■□□□□ 0.43
RAPH1-202ENST00000319170 RBM19Q9Y4C8 960 aaKnown RBP17.77■□□□□ 0.43
RAPH1-202ENST00000319170 PAK3O75914 559 aaPredicted RBP17.77■□□□□ 0.43
RAPH1-202ENST00000319170 MLECQ14165 292 aa17.76■□□□□ 0.43
RAPH1-202ENST00000319170 STK26Q9P289 416 aa17.76■□□□□ 0.43
RAPH1-202ENST00000319170 CHMP3Q9Y3E7 222 aa17.76■□□□□ 0.43
RAPH1-202ENST00000319170 ROCK2O75116 1388 aaKnown RBP17.76■□□□□ 0.43
RAPH1-202ENST00000319170 CREBRFQ8IUR6 639 aa17.75■□□□□ 0.43
RAPH1-202ENST00000319170 TRIM6-TRIM34B2RNG4 842 aa17.75■□□□□ 0.43
RAPH1-202ENST00000319170 FHAD1B1AJZ9 1412 aa17.75■□□□□ 0.43
RAPH1-202ENST00000319170 HDGFP51858 240 aaKnown RBP17.74■□□□□ 0.43
RAPH1-202ENST00000319170 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
RAPH1-202ENST00000319170 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
RAPH1-202ENST00000319170 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
RAPH1-202ENST00000319170 RWDD1Q9H446 243 aaPredicted RBP17.72■□□□□ 0.43
RAPH1-202ENST00000319170 GORABQ5T7V8 394 aa17.72■□□□□ 0.43
RAPH1-202ENST00000319170 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
RAPH1-202ENST00000319170 TMX4Q9H1E5 349 aaPredicted RBP17.72■□□□□ 0.43
RAPH1-202ENST00000319170 GOLGA6L3A6NEY3 463 aa17.71■□□□□ 0.43
RAPH1-202ENST00000319170 RCAN3Q9UKA8 241 aa17.71■□□□□ 0.43
RAPH1-202ENST00000319170 CSPP1Q1MSJ5 1256 aa17.71■□□□□ 0.42
RAPH1-202ENST00000319170 RASSF8Q8NHQ8 419 aa17.71■□□□□ 0.42
RAPH1-202ENST00000319170 NOL8Q76FK4 1167 aaKnown RBP17.69■□□□□ 0.42
RAPH1-202ENST00000319170 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
RAPH1-202ENST00000319170 TAF7LQ5H9L4 462 aa17.68■□□□□ 0.42
RAPH1-202ENST00000319170 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
RAPH1-202ENST00000319170 PHF14O94880 888 aa17.68■□□□□ 0.42
RAPH1-202ENST00000319170 HSPA5P11021 654 aaKnown RBP17.67■□□□□ 0.42
RAPH1-202ENST00000319170 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
RAPH1-202ENST00000319170 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
RAPH1-202ENST00000319170 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
RAPH1-202ENST00000319170 SETD5Q9C0A6 1442 aa17.67■□□□□ 0.42
RAPH1-202ENST00000319170 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
RAPH1-202ENST00000319170 CCDC34Q96HJ3 373 aa17.67■□□□□ 0.42
RAPH1-202ENST00000319170 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
RAPH1-202ENST00000319170 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
RAPH1-202ENST00000319170 EIF3AQ14152 1382 aaKnown RBP17.66■□□□□ 0.42
RAPH1-202ENST00000319170 VPS53Q5VIR6 699 aa17.65■□□□□ 0.42
RAPH1-202ENST00000319170 FOXD1Q16676 465 aa17.63■□□□□ 0.41
RAPH1-202ENST00000319170 FOXD4L5Q5VV16 416 aaPredicted RBP17.63■□□□□ 0.41
RAPH1-202ENST00000319170 FOXD4L4Q8WXT5 416 aaPredicted RBP17.63■□□□□ 0.41
RAPH1-202ENST00000319170 STK31Q9BXU1 1019 aa17.62■□□□□ 0.41
RAPH1-202ENST00000319170 SMC4Q9NTJ3 1288 aa17.62■□□□□ 0.41
RAPH1-202ENST00000319170 USP35Q9P2H5 1018 aa17.62■□□□□ 0.41
RAPH1-202ENST00000319170 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
RAPH1-202ENST00000319170 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
RAPH1-202ENST00000319170 G3V3G9 751 aa17.62■□□□□ 0.41
RAPH1-202ENST00000319170 DCAF8Q5TAQ9 597 aa17.62■□□□□ 0.41
RAPH1-202ENST00000319170 NACADO15069 1562 aa17.61■□□□□ 0.41
RAPH1-202ENST00000319170 TPM3P06753 285 aa17.61■□□□□ 0.41
RAPH1-202ENST00000319170 SETQ01105 290 aaPredicted RBP17.6■□□□□ 0.41
RAPH1-202ENST00000319170 KIF16BQ96L93 1317 aa17.6■□□□□ 0.41
RAPH1-202ENST00000319170 CEP89Q96ST8 783 aa17.6■□□□□ 0.41
RAPH1-202ENST00000319170 SLC4A10Q6U841 1118 aa17.59■□□□□ 0.41
RAPH1-202ENST00000319170 PES1O00541 588 aaKnown RBP17.59■□□□□ 0.41
RAPH1-202ENST00000319170 RALBP1Q15311 655 aa17.59■□□□□ 0.41
RAPH1-202ENST00000319170 HMMRO75330 724 aa17.59■□□□□ 0.41
RAPH1-202ENST00000319170 CCDC146Q8IYE0 955 aa17.58■□□□□ 0.4
RAPH1-202ENST00000319170 TPD52L1Q16890 204 aaPredicted RBP17.57■□□□□ 0.4
RAPH1-202ENST00000319170 ST18O60284 1047 aa17.56■□□□□ 0.4
RAPH1-202ENST00000319170 PKD2Q13563 968 aa17.55■□□□□ 0.4
RAPH1-202ENST00000319170 IPO9Q96P70 1041 aaKnown RBP17.55■□□□□ 0.4
RAPH1-202ENST00000319170 CCDC9Q9Y3X0 531 aaKnown RBP17.55■□□□□ 0.4
RAPH1-202ENST00000319170 MARCH6O60337 910 aa17.55■□□□□ 0.4
RAPH1-202ENST00000319170 TOMM22Q9NS69 142 aa17.55■□□□□ 0.4
RAPH1-202ENST00000319170 H3BQV1 296 aa17.55■□□□□ 0.4
RAPH1-202ENST00000319170 IFFO2Q5TF58 517 aa17.55■□□□□ 0.4
RAPH1-202ENST00000319170 GGT6Q6P531 493 aa17.54■□□□□ 0.4
RAPH1-202ENST00000319170 CUX2O14529 1486 aa17.53■□□□□ 0.4
RAPH1-202ENST00000319170 SF3A1Q15459 793 aaKnown RBP17.53■□□□□ 0.4
RAPH1-202ENST00000319170 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
RAPH1-202ENST00000319170 PRDM2Q13029 1718 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms