RNA–Protein interactions for RNA: ENST00000318524.6

NFX1-201, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best) BASIC

Gene NFX1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-201ENST00000318524 MYOM3Q5VTT5 1437 aa9.32□□□□□ -0.92
NFX1-201ENST00000318524 RAPGEF6Q8TEU7 1601 aa9.32□□□□□ -0.92
NFX1-201ENST00000318524 SENP3-EIF4A1A0A087X0R7 540 aa9.3□□□□□ -0.92
NFX1-201ENST00000318524 HECW1Q76N89 1606 aa9.3□□□□□ -0.92
NFX1-201ENST00000318524 TROQ12816 1431 aaPredicted RBP9.3□□□□□ -0.92
NFX1-201ENST00000318524 ARID4BQ4LE39 1312 aaPredicted RBP9.29□□□□□ -0.92
NFX1-201ENST00000318524 KIF3BO15066 747 aa9.28□□□□□ -0.92
NFX1-201ENST00000318524 SETD5Q9C0A6 1442 aa9.28□□□□□ -0.92
NFX1-201ENST00000318524 EFCAB2Q5VUJ9 269 aa9.28□□□□□ -0.92
NFX1-201ENST00000318524 DHX57Q6P158 1386 aaKnown RBP9.28□□□□□ -0.92
NFX1-201ENST00000318524 ARHGAP5Q13017 1502 aa9.28□□□□□ -0.92
NFX1-201ENST00000318524 PKD2Q13563 968 aa9.28□□□□□ -0.92
NFX1-201ENST00000318524 RRBP1Q9P2E9 1410 aaKnown RBP9.27□□□□□ -0.93
NFX1-201ENST00000318524 MPHOSPH9Q99550 1183 aa9.26□□□□□ -0.93
NFX1-201ENST00000318524 ASXL2Q76L83 1435 aa9.26□□□□□ -0.93
NFX1-201ENST00000318524 ZEB1P37275 1124 aaPredicted RBP9.26□□□□□ -0.93
NFX1-201ENST00000318524 GPATCH8Q9UKJ3 1502 aaKnown RBP9.25□□□□□ -0.93
NFX1-201ENST00000318524 SCAPERQ9BY12 1400 aa9.25□□□□□ -0.93
NFX1-201ENST00000318524 SPAG9O60271 1321 aaKnown RBP9.25□□□□□ -0.93
NFX1-201ENST00000318524 NUP155O75694 1391 aa9.25□□□□□ -0.93
NFX1-201ENST00000318524 SUPT6HQ7KZ85 1726 aaKnown RBP9.24□□□□□ -0.93
NFX1-201ENST00000318524 EHBP1L1Q8N3D4 1523 aa9.24□□□□□ -0.93
NFX1-201ENST00000318524 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
NFX1-201ENST00000318524 CAMSAP2Q08AD1 1489 aa9.22□□□□□ -0.93
NFX1-201ENST00000318524 ABCC5O15440 1437 aa9.22□□□□□ -0.93
NFX1-201ENST00000318524 TSPOAP1O95153 1857 aa9.22□□□□□ -0.93
NFX1-201ENST00000318524 CFAP43Q8NDM7 1665 aa9.22□□□□□ -0.93
NFX1-201ENST00000318524 ABCC2Q92887 1545 aa9.21□□□□□ -0.93
NFX1-201ENST00000318524 TONSLQ96HA7 1378 aa9.21□□□□□ -0.94
NFX1-201ENST00000318524 KIF15Q9NS87 1388 aa9.21□□□□□ -0.94
NFX1-201ENST00000318524 CLASP1Q7Z460 1538 aa9.21□□□□□ -0.94
NFX1-201ENST00000318524 TRAPPC8Q9Y2L5 1435 aa9.2□□□□□ -0.94
NFX1-201ENST00000318524 DAPK1P53355 1430 aa9.2□□□□□ -0.94
NFX1-201ENST00000318524 KDM6BO15054 1643 aa9.2□□□□□ -0.94
NFX1-201ENST00000318524 ABCA8O94911 1581 aa9.2□□□□□ -0.94
NFX1-201ENST00000318524 DIEXFQ68CQ4 756 aaKnown RBP9.2□□□□□ -0.94
NFX1-201ENST00000318524 NAIPQ13075 1403 aa9.2□□□□□ -0.94
NFX1-201ENST00000318524 CFAP65Q6ZU64 1925 aaKnown RBP9.19□□□□□ -0.94
NFX1-201ENST00000318524 DDX10Q13206 875 aaKnown RBP9.19□□□□□ -0.94
NFX1-201ENST00000318524 TTC37Q6PGP7 1564 aa9.19□□□□□ -0.94
NFX1-201ENST00000318524 CD109Q6YHK3 1445 aa9.19□□□□□ -0.94
NFX1-201ENST00000318524 SYCP2Q9BX26 1530 aa9.19□□□□□ -0.94
NFX1-201ENST00000318524 L3MBTL2Q969R5 705 aa9.18□□□□□ -0.94
NFX1-201ENST00000318524 ADCY10Q96PN6 1610 aa9.18□□□□□ -0.94
NFX1-201ENST00000318524 DCAF11Q8TEB1 546 aa9.18□□□□□ -0.94
NFX1-201ENST00000318524 C9orf84Q5VXU9 1444 aa9.17□□□□□ -0.94
NFX1-201ENST00000318524 ANKRD30AQ9BXX3 1397 aa9.17□□□□□ -0.94
NFX1-201ENST00000318524 BCANQ96GW7 911 aa9.17□□□□□ -0.94
NFX1-201ENST00000318524 ZCCHC11Q5TAX3 1644 aaKnown RBP9.16□□□□□ -0.94
NFX1-201ENST00000318524 SAFB2Q14151 953 aaKnown RBP eCLIP9.16□□□□□ -0.94
NFX1-201ENST00000318524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.16□□□□□ -0.94
NFX1-201ENST00000318524 PLEKHG5O94827 1062 aa9.16□□□□□ -0.94
NFX1-201ENST00000318524 ANKRD50Q9ULJ7 1429 aa9.16□□□□□ -0.94
NFX1-201ENST00000318524 FANCAO15360 1455 aa9.15□□□□□ -0.94
NFX1-201ENST00000318524 CEBPAP49715 358 aaPredicted RBP9.15□□□□□ -0.94
NFX1-201ENST00000318524 WDR7Q9Y4E6 1490 aa9.15□□□□□ -0.94
NFX1-201ENST00000318524 ZNF316A6NFI3 1004 aaPredicted RBP9.15□□□□□ -0.95
NFX1-201ENST00000318524 RIMBP3CA6NJZ7 1639 aa9.15□□□□□ -0.95
NFX1-201ENST00000318524 RIMBP3BA6NNM3 1639 aa9.15□□□□□ -0.95
NFX1-201ENST00000318524 RIMBP3Q9UFD9 1639 aa9.15□□□□□ -0.95
NFX1-201ENST00000318524 PLEKHH2Q8IVE3 1493 aa9.15□□□□□ -0.95
NFX1-201ENST00000318524 ARHGEF12Q9NZN5 1544 aa9.14□□□□□ -0.95
NFX1-201ENST00000318524 WASHC2CQ9Y4E1 1318 aa9.13□□□□□ -0.95
NFX1-201ENST00000318524 ADGRL1O94910 1474 aa9.13□□□□□ -0.95
NFX1-201ENST00000318524 FBXO31Q5XUX0 539 aaPredicted RBP9.13□□□□□ -0.95
NFX1-201ENST00000318524 ESF1Q9H501 851 aaKnown RBP9.13□□□□□ -0.95
NFX1-201ENST00000318524 STAG3Q9UJ98 1225 aa9.13□□□□□ -0.95
NFX1-201ENST00000318524 NCOA1Q15788 1441 aa9.13□□□□□ -0.95
NFX1-201ENST00000318524 MIER1Q8N108 512 aa9.12□□□□□ -0.95
NFX1-201ENST00000318524 MAP3K1Q13233 1512 aa9.12□□□□□ -0.95
NFX1-201ENST00000318524 ABCC10Q5T3U5 1492 aa9.11□□□□□ -0.95
NFX1-201ENST00000318524 HFM1A2PYH4 1435 aa9.11□□□□□ -0.95
NFX1-201ENST00000318524 SHROOM2Q13796 1616 aa9.11□□□□□ -0.95
NFX1-201ENST00000318524 NBPF8Q3BBV2 869 aa9.1□□□□□ -0.95
NFX1-201ENST00000318524 MIA2Q96PC5 1412 aa9.1□□□□□ -0.95
NFX1-201ENST00000318524 KDM5BQ9UGL1 1544 aa9.1□□□□□ -0.95
NFX1-201ENST00000318524 CDC42BPAQ5VT25 1732 aa9.1□□□□□ -0.95
NFX1-201ENST00000318524 PLCH2O75038 1416 aa9.09□□□□□ -0.95
NFX1-201ENST00000318524 AKNAQ7Z591 1439 aa9.09□□□□□ -0.95
NFX1-201ENST00000318524 STK26Q9P289 416 aa9.09□□□□□ -0.95
NFX1-201ENST00000318524 SAMD9LQ8IVG5 1584 aa9.09□□□□□ -0.95
NFX1-201ENST00000318524 NBPF1Q3BBV0 1214 aa9.08□□□□□ -0.96
NFX1-201ENST00000318524 MAPKBP1O60336 1514 aa9.08□□□□□ -0.96
NFX1-201ENST00000318524 YEATS2Q9ULM3 1422 aa9.07□□□□□ -0.96
NFX1-201ENST00000318524 PPP1R15AO75807 674 aaPredicted RBP9.07□□□□□ -0.96
NFX1-201ENST00000318524 CCDC141Q6ZP82 1450 aa9.07□□□□□ -0.96
NFX1-201ENST00000318524 CDC42BPBQ9Y5S2 1711 aa9.07□□□□□ -0.96
NFX1-201ENST00000318524 NUTM2FA1L443 756 aa9.06□□□□□ -0.96
NFX1-201ENST00000318524 TMEM132EQ6IEE7 984 aa9.06□□□□□ -0.96
NFX1-201ENST00000318524 RBM33Q96EV2 1170 aaKnown RBP9.06□□□□□ -0.96
NFX1-201ENST00000318524 MBD5Q9P267 1494 aa9.06□□□□□ -0.96
NFX1-201ENST00000318524 DNAJC5Q9H3Z4 198 aa9.06□□□□□ -0.96
NFX1-201ENST00000318524 HSPA5P11021 654 aaKnown RBP9.05□□□□□ -0.96
NFX1-201ENST00000318524 CARD11Q9BXL7 1154 aa9.05□□□□□ -0.96
NFX1-201ENST00000318524 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.97
NFX1-201ENST00000318524 COL17A1Q9UMD9 1497 aaPredicted RBP9.01□□□□□ -0.97
NFX1-201ENST00000318524 C11orf95C9JLR9 678 aaPredicted RBP9.01□□□□□ -0.97
NFX1-201ENST00000318524 MYO5CQ9NQX4 1742 aa9.01□□□□□ -0.97
NFX1-201ENST00000318524 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
NFX1-201ENST00000318524 TRAK1Q9UPV9 953 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms