RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 HECW1Q76N89 1606 aa22.3■■□□□ 1.16
CRAT-201ENST00000318080 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
CRAT-201ENST00000318080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
CRAT-201ENST00000318080 CDK11AQ9UQ88 783 aaPredicted RBP22.27■■□□□ 1.16
CRAT-201ENST00000318080 UACAQ9BZF9 1416 aa22.25■■□□□ 1.15
CRAT-201ENST00000318080 HFM1A2PYH4 1435 aa22.24■■□□□ 1.15
CRAT-201ENST00000318080 DEKP35659 375 aaKnown RBP22.23■■□□□ 1.15
CRAT-201ENST00000318080 CCDC184Q52MB2 194 aa22.23■■□□□ 1.15
CRAT-201ENST00000318080 NAIPQ13075 1403 aa22.22■■□□□ 1.15
CRAT-201ENST00000318080 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
CRAT-201ENST00000318080 WASHC2AQ641Q2 1341 aa22.22■■□□□ 1.15
CRAT-201ENST00000318080 NBR1Q14596 966 aa22.21■■□□□ 1.15
CRAT-201ENST00000318080 RRP7BPQ9NSQ0 103 aa22.21■■□□□ 1.15
CRAT-201ENST00000318080 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
CRAT-201ENST00000318080 ABCA8O94911 1581 aa22.21■■□□□ 1.15
CRAT-201ENST00000318080 PTPN23Q9H3S7 1636 aa22.21■■□□□ 1.15
CRAT-201ENST00000318080 FANCIQ9NVI1 1328 aa22.21■■□□□ 1.15
CRAT-201ENST00000318080 HSPA5P11021 654 aaKnown RBP22.2■■□□□ 1.14
CRAT-201ENST00000318080 ANO8Q9HCE9 1232 aaPredicted RBP22.2■■□□□ 1.14
CRAT-201ENST00000318080 ATP10BO94823 1461 aa22.16■■□□□ 1.14
CRAT-201ENST00000318080 NCOA2Q15596 1464 aa22.16■■□□□ 1.14
CRAT-201ENST00000318080 B4GALNT3Q6L9W6 998 aa22.15■■□□□ 1.14
CRAT-201ENST00000318080 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
CRAT-201ENST00000318080 FOXD1Q16676 465 aa22.12■■□□□ 1.13
CRAT-201ENST00000318080 EHBP1L1Q8N3D4 1523 aa22.12■■□□□ 1.13
CRAT-201ENST00000318080 MYOM3Q5VTT5 1437 aa22.12■■□□□ 1.13
CRAT-201ENST00000318080 DENND4BO75064 1496 aaPredicted RBP22.1■■□□□ 1.13
CRAT-201ENST00000318080 SLC24A1O60721 1099 aa22.09■■□□□ 1.13
CRAT-201ENST00000318080 PAK3O75914 559 aaPredicted RBP22.09■■□□□ 1.13
CRAT-201ENST00000318080 SUPT6HQ7KZ85 1726 aaKnown RBP22.07■■□□□ 1.12
CRAT-201ENST00000318080 KIF14Q15058 1648 aa22.06■■□□□ 1.12
CRAT-201ENST00000318080 SENP3-EIF4A1A0A087X0R7 540 aa22.05■■□□□ 1.12
CRAT-201ENST00000318080 FAM9BQ8IZU0 186 aa22.05■■□□□ 1.12
CRAT-201ENST00000318080 ABCC2Q92887 1545 aa22.04■■□□□ 1.12
CRAT-201ENST00000318080 L3MBTL2Q969R5 705 aa22.04■■□□□ 1.12
CRAT-201ENST00000318080 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
CRAT-201ENST00000318080 EIF4G2P78344 907 aaKnown RBP eCLIP22.04■■□□□ 1.12
CRAT-201ENST00000318080 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
CRAT-201ENST00000318080 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
CRAT-201ENST00000318080 KDM6BO15054 1643 aa22.02■■□□□ 1.12
CRAT-201ENST00000318080 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
CRAT-201ENST00000318080 CNGB1Q14028 1251 aaPredicted RBP21.99■■□□□ 1.11
CRAT-201ENST00000318080 ADCY10Q96PN6 1610 aa21.99■■□□□ 1.11
CRAT-201ENST00000318080 MPHOSPH9Q99550 1183 aa21.99■■□□□ 1.11
CRAT-201ENST00000318080 PRKRIP1Q9H875 184 aaPredicted RBP21.98■■□□□ 1.11
CRAT-201ENST00000318080 CNTLNQ9NXG0 1405 aa21.96■■□□□ 1.11
CRAT-201ENST00000318080 NBPF8Q3BBV2 869 aa21.96■■□□□ 1.11
CRAT-201ENST00000318080 PPP4R2Q9NY27 417 aa21.96■■□□□ 1.11
CRAT-201ENST00000318080 MRS2Q9HD23 443 aa21.96■■□□□ 1.11
CRAT-201ENST00000318080 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
CRAT-201ENST00000318080 ZCCHC11Q5TAX3 1644 aaKnown RBP21.94■■□□□ 1.1
CRAT-201ENST00000318080 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
CRAT-201ENST00000318080 CCDC7Q96M83 1385 aa21.93■■□□□ 1.1
CRAT-201ENST00000318080 RTN4Q9NQC3 1192 aaKnown RBP21.92■■□□□ 1.1
CRAT-201ENST00000318080 NOP58Q9Y2X3 529 aaKnown RBP21.92■■□□□ 1.1
CRAT-201ENST00000318080 UHRF1BP1LA0JNW5 1464 aa21.91■■□□□ 1.1
CRAT-201ENST00000318080 SALL2Q9Y467 1007 aaPredicted RBP21.89■■□□□ 1.1
CRAT-201ENST00000318080 NCOA1Q15788 1441 aa21.89■■□□□ 1.09
CRAT-201ENST00000318080 GPATCH8Q9UKJ3 1502 aaKnown RBP21.88■■□□□ 1.09
CRAT-201ENST00000318080 CCDC136Q96JN2 1154 aa21.88■■□□□ 1.09
CRAT-201ENST00000318080 CFDP1Q9UEE9 299 aaPredicted RBP21.87■■□□□ 1.09
CRAT-201ENST00000318080 ABCC10Q5T3U5 1492 aa21.87■■□□□ 1.09
CRAT-201ENST00000318080 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
CRAT-201ENST00000318080 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
CRAT-201ENST00000318080 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
CRAT-201ENST00000318080 TCOF1Q13428 1488 aaKnown RBP21.86■■□□□ 1.09
CRAT-201ENST00000318080 KIF7Q2M1P5 1343 aa21.85■■□□□ 1.09
CRAT-201ENST00000318080 ZBED9Q6R2W3 1325 aa21.84■■□□□ 1.09
CRAT-201ENST00000318080 IL27Q8NEV9 243 aa21.84■■□□□ 1.09
CRAT-201ENST00000318080 TTC37Q6PGP7 1564 aa21.83■■□□□ 1.09
CRAT-201ENST00000318080 ERICH6BQ5W0A0 696 aa21.83■■□□□ 1.08
CRAT-201ENST00000318080 GCC2Q8IWJ2 1684 aa21.82■■□□□ 1.08
CRAT-201ENST00000318080 CDC42BPAQ5VT25 1732 aa21.81■■□□□ 1.08
CRAT-201ENST00000318080 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
CRAT-201ENST00000318080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.8■■□□□ 1.08
CRAT-201ENST00000318080 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
CRAT-201ENST00000318080 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
CRAT-201ENST00000318080 ASXL2Q76L83 1435 aa21.78■■□□□ 1.08
CRAT-201ENST00000318080 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.08
CRAT-201ENST00000318080 AKNAQ7Z591 1439 aa21.77■■□□□ 1.08
CRAT-201ENST00000318080 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
CRAT-201ENST00000318080 SPATA31E1Q6ZUB1 1445 aa21.76■■□□□ 1.07
CRAT-201ENST00000318080 NPM1P06748 294 aaKnown RBP eCLIP21.75■■□□□ 1.07
CRAT-201ENST00000318080 TEX14Q8IWB6 1497 aa21.75■■□□□ 1.07
CRAT-201ENST00000318080 RPRD2Q5VT52 1461 aaKnown RBP21.74■■□□□ 1.07
CRAT-201ENST00000318080 HNRNPMP52272 730 aaKnown RBP eCLIP21.74■■□□□ 1.07
CRAT-201ENST00000318080 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.74■■□□□ 1.07
CRAT-201ENST00000318080 WDR7Q9Y4E6 1490 aa21.74■■□□□ 1.07
CRAT-201ENST00000318080 MYT1LQ9UL68 1186 aa21.73■■□□□ 1.07
CRAT-201ENST00000318080 CDC42BPBQ9Y5S2 1711 aa21.73■■□□□ 1.07
CRAT-201ENST00000318080 ITSN2Q9NZM3 1697 aa21.73■■□□□ 1.07
CRAT-201ENST00000318080 ZNF326Q5BKZ1 582 aaKnown RBP21.72■■□□□ 1.07
CRAT-201ENST00000318080 ABCC5O15440 1437 aa21.72■■□□□ 1.07
CRAT-201ENST00000318080 NPM2Q86SE8 214 aaKnown RBP21.71■■□□□ 1.07
CRAT-201ENST00000318080 DAPK1P53355 1430 aa21.7■■□□□ 1.06
CRAT-201ENST00000318080 ARHGAP5Q13017 1502 aa21.68■■□□□ 1.06
CRAT-201ENST00000318080 DHX29Q7Z478 1369 aaKnown RBP21.67■■□□□ 1.06
CRAT-201ENST00000318080 RTL5Q5HYW3 569 aaPredicted RBP21.67■■□□□ 1.06
CRAT-201ENST00000318080 PREX2Q70Z35 1606 aa21.67■■□□□ 1.06
CRAT-201ENST00000318080 SAMD9LQ8IVG5 1584 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms