RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
LYSMD3-201ENST00000315948 CAMSAP2Q08AD1 1489 aa10.23□□□□□ -0.77
LYSMD3-201ENST00000315948 DENND4BO75064 1496 aaPredicted RBP10.22□□□□□ -0.77
LYSMD3-201ENST00000315948 MIA2Q96PC5 1412 aa10.22□□□□□ -0.77
LYSMD3-201ENST00000315948 ABCC10Q5T3U5 1492 aa10.22□□□□□ -0.77
LYSMD3-201ENST00000315948 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
LYSMD3-201ENST00000315948 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
LYSMD3-201ENST00000315948 CDC42BPAQ5VT25 1732 aa10.19□□□□□ -0.78
LYSMD3-201ENST00000315948 ABCC2Q92887 1545 aa10.19□□□□□ -0.78
LYSMD3-201ENST00000315948 MPHOSPH9Q99550 1183 aa10.18□□□□□ -0.78
LYSMD3-201ENST00000315948 CLSPNQ9HAW4 1339 aa10.17□□□□□ -0.78
LYSMD3-201ENST00000315948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.16□□□□□ -0.78
LYSMD3-201ENST00000315948 DNMT1P26358 1616 aaKnown RBP10.16□□□□□ -0.78
LYSMD3-201ENST00000315948 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
LYSMD3-201ENST00000315948 AKNAQ7Z591 1439 aa10.16□□□□□ -0.78
LYSMD3-201ENST00000315948 MIER1Q8N108 512 aa10.15□□□□□ -0.78
LYSMD3-201ENST00000315948 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
LYSMD3-201ENST00000315948 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.78
LYSMD3-201ENST00000315948 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.78
LYSMD3-201ENST00000315948 AFAP1Q8N556 730 aa10.14□□□□□ -0.79
LYSMD3-201ENST00000315948 CYB5RLQ6IPT4 315 aa10.14□□□□□ -0.79
LYSMD3-201ENST00000315948 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 ARHGAP5Q13017 1502 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 SAMD9LQ8IVG5 1584 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 ARHGEF12Q9NZN5 1544 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 C9orf84Q5VXU9 1444 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 SYCP2Q9BX26 1530 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 TSPY4P0CV99 314 aa10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 TSPY10P0CW01 314 aa10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 PPP1R15AO75807 674 aaPredicted RBP10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 YTHDC1Q96MU7 727 aaKnown RBP10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 KDM5BQ9UGL1 1544 aa10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 GCC2Q8IWJ2 1684 aa10.11□□□□□ -0.79
LYSMD3-201ENST00000315948 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
LYSMD3-201ENST00000315948 TONSLQ96HA7 1378 aa10.11□□□□□ -0.79
LYSMD3-201ENST00000315948 ROCK1Q13464 1354 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 PKD2Q13563 968 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 KIF15Q9NS87 1388 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 ANKRD50Q9ULJ7 1429 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 L3MBTL2Q969R5 705 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 TRAPPC8Q9Y2L5 1435 aa10.09□□□□□ -0.79
LYSMD3-201ENST00000315948 ANKRD30AQ9BXX3 1397 aa10.09□□□□□ -0.79
LYSMD3-201ENST00000315948 PZPP20742 1482 aa10.09□□□□□ -0.79
LYSMD3-201ENST00000315948 ASXL2Q76L83 1435 aa10.08□□□□□ -0.8
LYSMD3-201ENST00000315948 NUP155O75694 1391 aa10.08□□□□□ -0.8
LYSMD3-201ENST00000315948 ZNF326Q5BKZ1 582 aaKnown RBP10.08□□□□□ -0.8
LYSMD3-201ENST00000315948 PREX2Q70Z35 1606 aa10.08□□□□□ -0.8
LYSMD3-201ENST00000315948 UHRF1BP1LA0JNW5 1464 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 ANKRD30BQ9BXX2 1392 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 NBPF8Q3BBV2 869 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 CROCC2H7BZ55 1655 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 DDX10Q13206 875 aaKnown RBP10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 PLCH2O75038 1416 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 WDR7Q9Y4E6 1490 aa10.05□□□□□ -0.8
LYSMD3-201ENST00000315948 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
LYSMD3-201ENST00000315948 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
LYSMD3-201ENST00000315948 ADGRL2O95490 1459 aa10.04□□□□□ -0.8
LYSMD3-201ENST00000315948 PLEKHH2Q8IVE3 1493 aa10.04□□□□□ -0.8
LYSMD3-201ENST00000315948 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
LYSMD3-201ENST00000315948 MYO5CQ9NQX4 1742 aa10.02□□□□□ -0.8
LYSMD3-201ENST00000315948 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
LYSMD3-201ENST00000315948 RAPGEF3O95398 923 aa10.01□□□□□ -0.81
LYSMD3-201ENST00000315948 ADGBQ8N7X0 1667 aa10.01□□□□□ -0.81
LYSMD3-201ENST00000315948 RGL3Q3MIN7 710 aa10.01□□□□□ -0.81
LYSMD3-201ENST00000315948 FANCAO15360 1455 aa10.01□□□□□ -0.81
LYSMD3-201ENST00000315948 SCAPERQ9BY12 1400 aa10□□□□□ -0.81
LYSMD3-201ENST00000315948 SPAG9O60271 1321 aaKnown RBP10□□□□□ -0.81
LYSMD3-201ENST00000315948 SHANK2Q9UPX8 1470 aa10□□□□□ -0.81
LYSMD3-201ENST00000315948 C11orf95C9JLR9 678 aaPredicted RBP9.99□□□□□ -0.81
LYSMD3-201ENST00000315948 ARHGEF5Q12774 1597 aa9.99□□□□□ -0.81
LYSMD3-201ENST00000315948 ABCC1P33527 1531 aa9.98□□□□□ -0.81
LYSMD3-201ENST00000315948 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
LYSMD3-201ENST00000315948 KIAA1107Q9UPP5 1409 aa9.98□□□□□ -0.81
LYSMD3-201ENST00000315948 CNGB1Q14028 1251 aaPredicted RBP9.98□□□□□ -0.81
LYSMD3-201ENST00000315948 RPRD2Q5VT52 1461 aaKnown RBP9.97□□□□□ -0.81
LYSMD3-201ENST00000315948 TEX14Q8IWB6 1497 aa9.97□□□□□ -0.81
LYSMD3-201ENST00000315948 ADGRL1O94910 1474 aa9.97□□□□□ -0.81
LYSMD3-201ENST00000315948 KIF3BO15066 747 aa9.96□□□□□ -0.82
LYSMD3-201ENST00000315948 SENP3Q9H4L4 574 aaPredicted RBP9.96□□□□□ -0.82
LYSMD3-201ENST00000315948 CD109Q6YHK3 1445 aa9.96□□□□□ -0.82
LYSMD3-201ENST00000315948 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
LYSMD3-201ENST00000315948 FAM135AQ9P2D6 1515 aa9.95□□□□□ -0.82
LYSMD3-201ENST00000315948 DCAF11Q8TEB1 546 aa9.95□□□□□ -0.82
LYSMD3-201ENST00000315948 RSPH4AQ5TD94 716 aa9.95□□□□□ -0.82
LYSMD3-201ENST00000315948 PLA2R1Q13018 1463 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 RIMBP3CA6NJZ7 1639 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 RIMBP3BA6NNM3 1639 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 RIMBP3Q9UFD9 1639 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 ABCA9Q8IUA7 1624 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 FAM69CQ0P6D2 419 aa9.93□□□□□ -0.82
LYSMD3-201ENST00000315948 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
LYSMD3-201ENST00000315948 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
LYSMD3-201ENST00000315948 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
LYSMD3-201ENST00000315948 GGT6Q6P531 493 aa9.91□□□□□ -0.82
LYSMD3-201ENST00000315948 NBPF1Q3BBV0 1214 aa9.9□□□□□ -0.82
LYSMD3-201ENST00000315948 SCAF1Q9H7N4 1312 aaKnown RBP9.9□□□□□ -0.83
LYSMD3-201ENST00000315948 EIF4G2P78344 907 aaKnown RBP eCLIP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms