RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
LYSMD3-201ENST00000315948 CAMSAP2Q08AD1 1489 aa10.23□□□□□ -0.77
LYSMD3-201ENST00000315948 DENND4BO75064 1496 aaPredicted RBP10.22□□□□□ -0.77
LYSMD3-201ENST00000315948 MIA2Q96PC5 1412 aa10.22□□□□□ -0.77
LYSMD3-201ENST00000315948 ABCC10Q5T3U5 1492 aa10.22□□□□□ -0.77
LYSMD3-201ENST00000315948 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
LYSMD3-201ENST00000315948 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
LYSMD3-201ENST00000315948 CDC42BPAQ5VT25 1732 aa10.19□□□□□ -0.78
LYSMD3-201ENST00000315948 ABCC2Q92887 1545 aa10.19□□□□□ -0.78
LYSMD3-201ENST00000315948 MPHOSPH9Q99550 1183 aa10.18□□□□□ -0.78
LYSMD3-201ENST00000315948 CLSPNQ9HAW4 1339 aa10.17□□□□□ -0.78
LYSMD3-201ENST00000315948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.16□□□□□ -0.78
LYSMD3-201ENST00000315948 DNMT1P26358 1616 aaKnown RBP10.16□□□□□ -0.78
LYSMD3-201ENST00000315948 NCOA1Q15788 1441 aa10.16□□□□□ -0.78
LYSMD3-201ENST00000315948 AKNAQ7Z591 1439 aa10.16□□□□□ -0.78
LYSMD3-201ENST00000315948 MIER1Q8N108 512 aa10.15□□□□□ -0.78
LYSMD3-201ENST00000315948 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.78
LYSMD3-201ENST00000315948 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.78
LYSMD3-201ENST00000315948 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.78
LYSMD3-201ENST00000315948 AFAP1Q8N556 730 aa10.14□□□□□ -0.79
LYSMD3-201ENST00000315948 CYB5RLQ6IPT4 315 aa10.14□□□□□ -0.79
LYSMD3-201ENST00000315948 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 ARHGAP5Q13017 1502 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 SAMD9LQ8IVG5 1584 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 ARHGEF12Q9NZN5 1544 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 C9orf84Q5VXU9 1444 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 SYCP2Q9BX26 1530 aa10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.13□□□□□ -0.79
LYSMD3-201ENST00000315948 TSPY4P0CV99 314 aa10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 TSPY10P0CW01 314 aa10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 PPP1R15AO75807 674 aaPredicted RBP10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 YTHDC1Q96MU7 727 aaKnown RBP10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 KDM5BQ9UGL1 1544 aa10.12□□□□□ -0.79
LYSMD3-201ENST00000315948 GCC2Q8IWJ2 1684 aa10.11□□□□□ -0.79
LYSMD3-201ENST00000315948 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
LYSMD3-201ENST00000315948 TONSLQ96HA7 1378 aa10.11□□□□□ -0.79
LYSMD3-201ENST00000315948 ROCK1Q13464 1354 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 PKD2Q13563 968 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 KIF15Q9NS87 1388 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 ANKRD50Q9ULJ7 1429 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 L3MBTL2Q969R5 705 aa10.1□□□□□ -0.79
LYSMD3-201ENST00000315948 TRAPPC8Q9Y2L5 1435 aa10.09□□□□□ -0.79
LYSMD3-201ENST00000315948 ANKRD30AQ9BXX3 1397 aa10.09□□□□□ -0.79
LYSMD3-201ENST00000315948 PZPP20742 1482 aa10.09□□□□□ -0.79
LYSMD3-201ENST00000315948 ASXL2Q76L83 1435 aa10.08□□□□□ -0.8
LYSMD3-201ENST00000315948 NUP155O75694 1391 aa10.08□□□□□ -0.8
LYSMD3-201ENST00000315948 ZNF326Q5BKZ1 582 aaKnown RBP10.08□□□□□ -0.8
LYSMD3-201ENST00000315948 PREX2Q70Z35 1606 aa10.08□□□□□ -0.8
LYSMD3-201ENST00000315948 UHRF1BP1LA0JNW5 1464 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 ANKRD30BQ9BXX2 1392 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 NBPF8Q3BBV2 869 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 CROCC2H7BZ55 1655 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 DDX10Q13206 875 aaKnown RBP10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 PLCH2O75038 1416 aa10.06□□□□□ -0.8
LYSMD3-201ENST00000315948 WDR7Q9Y4E6 1490 aa10.05□□□□□ -0.8
LYSMD3-201ENST00000315948 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
LYSMD3-201ENST00000315948 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
LYSMD3-201ENST00000315948 ADGRL2O95490 1459 aa10.04□□□□□ -0.8
LYSMD3-201ENST00000315948 PLEKHH2Q8IVE3 1493 aa10.04□□□□□ -0.8
LYSMD3-201ENST00000315948 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
LYSMD3-201ENST00000315948 MYO5CQ9NQX4 1742 aa10.02□□□□□ -0.8
LYSMD3-201ENST00000315948 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
LYSMD3-201ENST00000315948 RAPGEF3O95398 923 aa10.01□□□□□ -0.81
LYSMD3-201ENST00000315948 ADGBQ8N7X0 1667 aa10.01□□□□□ -0.81
LYSMD3-201ENST00000315948 RGL3Q3MIN7 710 aa10.01□□□□□ -0.81
LYSMD3-201ENST00000315948 FANCAO15360 1455 aa10.01□□□□□ -0.81
LYSMD3-201ENST00000315948 SCAPERQ9BY12 1400 aa10□□□□□ -0.81
LYSMD3-201ENST00000315948 SPAG9O60271 1321 aaKnown RBP10□□□□□ -0.81
LYSMD3-201ENST00000315948 SHANK2Q9UPX8 1470 aa10□□□□□ -0.81
LYSMD3-201ENST00000315948 C11orf95C9JLR9 678 aaPredicted RBP9.99□□□□□ -0.81
LYSMD3-201ENST00000315948 ARHGEF5Q12774 1597 aa9.99□□□□□ -0.81
LYSMD3-201ENST00000315948 ABCC1P33527 1531 aa9.98□□□□□ -0.81
LYSMD3-201ENST00000315948 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
LYSMD3-201ENST00000315948 KIAA1107Q9UPP5 1409 aa9.98□□□□□ -0.81
LYSMD3-201ENST00000315948 CNGB1Q14028 1251 aaPredicted RBP9.98□□□□□ -0.81
LYSMD3-201ENST00000315948 RPRD2Q5VT52 1461 aaKnown RBP9.97□□□□□ -0.81
LYSMD3-201ENST00000315948 TEX14Q8IWB6 1497 aa9.97□□□□□ -0.81
LYSMD3-201ENST00000315948 ADGRL1O94910 1474 aa9.97□□□□□ -0.81
LYSMD3-201ENST00000315948 KIF3BO15066 747 aa9.96□□□□□ -0.82
LYSMD3-201ENST00000315948 SENP3Q9H4L4 574 aaPredicted RBP9.96□□□□□ -0.82
LYSMD3-201ENST00000315948 CD109Q6YHK3 1445 aa9.96□□□□□ -0.82
LYSMD3-201ENST00000315948 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
LYSMD3-201ENST00000315948 FAM135AQ9P2D6 1515 aa9.95□□□□□ -0.82
LYSMD3-201ENST00000315948 DCAF11Q8TEB1 546 aa9.95□□□□□ -0.82
LYSMD3-201ENST00000315948 RSPH4AQ5TD94 716 aa9.95□□□□□ -0.82
LYSMD3-201ENST00000315948 PLA2R1Q13018 1463 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 RIMBP3CA6NJZ7 1639 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 RIMBP3BA6NNM3 1639 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 RIMBP3Q9UFD9 1639 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 ABCA9Q8IUA7 1624 aa9.94□□□□□ -0.82
LYSMD3-201ENST00000315948 FAM69CQ0P6D2 419 aa9.93□□□□□ -0.82
LYSMD3-201ENST00000315948 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
LYSMD3-201ENST00000315948 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
LYSMD3-201ENST00000315948 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
LYSMD3-201ENST00000315948 GGT6Q6P531 493 aa9.91□□□□□ -0.82
LYSMD3-201ENST00000315948 NBPF1Q3BBV0 1214 aa9.9□□□□□ -0.82
LYSMD3-201ENST00000315948 SCAF1Q9H7N4 1312 aaKnown RBP9.9□□□□□ -0.83
LYSMD3-201ENST00000315948 EIF4G2P78344 907 aaKnown RBP eCLIP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms