RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 NPATQ14207 1427 aa7.14□□□□□ -1.27
POLR2B-201ENST00000314595 C9orf84Q5VXU9 1444 aa7.14□□□□□ -1.27
POLR2B-201ENST00000314595 HECW1Q76N89 1606 aa7.14□□□□□ -1.27
POLR2B-201ENST00000314595 FAM135AQ9P2D6 1515 aa7.13□□□□□ -1.27
POLR2B-201ENST00000314595 ATP10AO60312 1499 aa7.12□□□□□ -1.27
POLR2B-201ENST00000314595 CPS1P31327 1500 aa7.12□□□□□ -1.27
POLR2B-201ENST00000314595 HRCP23327 699 aa7.11□□□□□ -1.27
POLR2B-201ENST00000314595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.11□□□□□ -1.27
POLR2B-201ENST00000314595 UHRF1BP1Q6BDS2 1440 aa7.11□□□□□ -1.27
POLR2B-201ENST00000314595 TCOF1Q13428 1488 aaKnown RBP7.1□□□□□ -1.27
POLR2B-201ENST00000314595 CNTLNQ9NXG0 1405 aa7.1□□□□□ -1.27
POLR2B-201ENST00000314595 DIP2CQ9Y2E4 1556 aa7.09□□□□□ -1.27
POLR2B-201ENST00000314595 PRXQ9BXM0 1461 aa7.09□□□□□ -1.27
POLR2B-201ENST00000314595 SYNMO15061 1565 aa7.09□□□□□ -1.27
POLR2B-201ENST00000314595 POLR1AO95602 1720 aaPredicted RBP7.09□□□□□ -1.28
POLR2B-201ENST00000314595 MYO5CQ9NQX4 1742 aa7.09□□□□□ -1.28
POLR2B-201ENST00000314595 MYO3AQ8NEV4 1616 aa7.08□□□□□ -1.28
POLR2B-201ENST00000314595 ALKQ9UM73 1620 aa7.08□□□□□ -1.28
POLR2B-201ENST00000314595 PELP1Q8IZL8 1130 aaKnown RBP7.07□□□□□ -1.28
POLR2B-201ENST00000314595 MLH3Q9UHC1 1453 aa7.07□□□□□ -1.28
POLR2B-201ENST00000314595 DEPDC5O75140 1603 aa7.07□□□□□ -1.28
POLR2B-201ENST00000314595 NUP153P49790 1475 aaKnown RBP7.07□□□□□ -1.28
POLR2B-201ENST00000314595 TRAPPC8Q9Y2L5 1435 aa7.07□□□□□ -1.28
POLR2B-201ENST00000314595 ABCA6Q8N139 1617 aa7.05□□□□□ -1.28
POLR2B-201ENST00000314595 ZNF518AQ6AHZ1 1483 aa7.05□□□□□ -1.28
POLR2B-201ENST00000314595 PLXNC1O60486 1568 aa7.05□□□□□ -1.28
POLR2B-201ENST00000314595 ITSN2Q9NZM3 1697 aa7.05□□□□□ -1.28
POLR2B-201ENST00000314595 PLCH2O75038 1416 aa7.04□□□□□ -1.28
POLR2B-201ENST00000314595 RNF17Q9BXT8 1623 aaKnown RBP7.04□□□□□ -1.28
POLR2B-201ENST00000314595 CAMSAP1Q5T5Y3 1602 aa7.04□□□□□ -1.28
POLR2B-201ENST00000314595 SUPT6HQ7KZ85 1726 aaKnown RBP7.02□□□□□ -1.29
POLR2B-201ENST00000314595 NEURL4Q96JN8 1562 aa7.02□□□□□ -1.29
POLR2B-201ENST00000314595 CEP170BQ9Y4F5 1589 aaPredicted RBP7.02□□□□□ -1.29
POLR2B-201ENST00000314595 VWDEQ8N2E2 1590 aa7.02□□□□□ -1.29
POLR2B-201ENST00000314595 MED14O60244 1454 aa7.01□□□□□ -1.29
POLR2B-201ENST00000314595 PREX2Q70Z35 1606 aa7□□□□□ -1.29
POLR2B-201ENST00000314595 KIDINS220Q9ULH0 1771 aa7□□□□□ -1.29
POLR2B-201ENST00000314595 PTPRKQ15262 1439 aa6.99□□□□□ -1.29
POLR2B-201ENST00000314595 ABCC1P33527 1531 aa6.99□□□□□ -1.29
POLR2B-201ENST00000314595 PKD2Q13563 968 aa6.99□□□□□ -1.29
POLR2B-201ENST00000314595 RAPGEF3O95398 923 aa6.98□□□□□ -1.29
POLR2B-201ENST00000314595 HSPA2P54652 639 aa6.98□□□□□ -1.29
POLR2B-201ENST00000314595 CDC42BPBQ9Y5S2 1711 aa6.97□□□□□ -1.29
POLR2B-201ENST00000314595 DNMT1P26358 1616 aaKnown RBP6.97□□□□□ -1.29
POLR2B-201ENST00000314595 INO80Q9ULG1 1556 aaPredicted RBP6.97□□□□□ -1.29
POLR2B-201ENST00000314595 KIF14Q15058 1648 aa6.97□□□□□ -1.29
POLR2B-201ENST00000314595 A2ML1A8K2U0 1454 aa6.96□□□□□ -1.29
POLR2B-201ENST00000314595 ADGBQ8N7X0 1667 aa6.96□□□□□ -1.29
POLR2B-201ENST00000314595 ZC3H13Q5T200 1668 aaKnown RBP6.95□□□□□ -1.3
POLR2B-201ENST00000314595 KDM5AP29375 1690 aaKnown RBP6.95□□□□□ -1.3
POLR2B-201ENST00000314595 PPP6R1Q9UPN7 881 aa6.94□□□□□ -1.3
POLR2B-201ENST00000314595 SCAPERQ9BY12 1400 aa6.94□□□□□ -1.3
POLR2B-201ENST00000314595 CAMSAP2Q08AD1 1489 aa6.94□□□□□ -1.3
POLR2B-201ENST00000314595 SHANK2Q9UPX8 1470 aa6.94□□□□□ -1.3
POLR2B-201ENST00000314595 CLTCQ00610 1675 aaKnown RBP6.93□□□□□ -1.3
POLR2B-201ENST00000314595 XIRP1Q702N8 1843 aaKnown RBP6.93□□□□□ -1.3
POLR2B-201ENST00000314595 CDK13Q14004 1512 aaKnown RBP6.93□□□□□ -1.3
POLR2B-201ENST00000314595 IQGAP1P46940 1657 aa6.93□□□□□ -1.3
POLR2B-201ENST00000314595 CDK12Q9NYV4 1490 aaPredicted RBP6.92□□□□□ -1.3
POLR2B-201ENST00000314595 STRCP1A6NGW2 1772 aa6.92□□□□□ -1.3
POLR2B-201ENST00000314595 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
POLR2B-201ENST00000314595 ARID4BQ4LE39 1312 aaPredicted RBP6.92□□□□□ -1.3
POLR2B-201ENST00000314595 SAMD9LQ8IVG5 1584 aa6.91□□□□□ -1.3
POLR2B-201ENST00000314595 KCNH8Q96L42 1107 aa6.9□□□□□ -1.3
POLR2B-201ENST00000314595 CDC42BPAQ5VT25 1732 aa6.9□□□□□ -1.31
POLR2B-201ENST00000314595 LRRIQ1Q96JM4 1722 aa6.9□□□□□ -1.31
POLR2B-201ENST00000314595 KDM5DQ9BY66 1539 aa6.89□□□□□ -1.31
POLR2B-201ENST00000314595 NLRP1Q9C000 1473 aa6.89□□□□□ -1.31
POLR2B-201ENST00000314595 LRRC9Q6ZRR7 1453 aa6.88□□□□□ -1.31
POLR2B-201ENST00000314595 ATP7AQ04656 1500 aa6.88□□□□□ -1.31
POLR2B-201ENST00000314595 EEA1Q15075 1411 aa6.88□□□□□ -1.31
POLR2B-201ENST00000314595 KIAA1107Q9UPP5 1409 aa6.88□□□□□ -1.31
POLR2B-201ENST00000314595 NWD1Q149M9 1564 aa6.87□□□□□ -1.31
POLR2B-201ENST00000314595 TROQ12816 1431 aaPredicted RBP6.87□□□□□ -1.31
POLR2B-201ENST00000314595 LRRC7Q96NW7 1537 aa6.87□□□□□ -1.31
POLR2B-201ENST00000314595 PZPP20742 1482 aa6.87□□□□□ -1.31
POLR2B-201ENST00000314595 SETD1AO15047 1707 aaKnown RBP6.87□□□□□ -1.31
POLR2B-201ENST00000314595 MYT1Q01538 1121 aa6.87□□□□□ -1.31
POLR2B-201ENST00000314595 SHPRHQ149N8 1683 aa6.87□□□□□ -1.31
POLR2B-201ENST00000314595 FAM135BQ49AJ0 1406 aa6.86□□□□□ -1.31
POLR2B-201ENST00000314595 PLEKHH2Q8IVE3 1493 aa6.86□□□□□ -1.31
POLR2B-201ENST00000314595 ABCC3O15438 1527 aa6.86□□□□□ -1.31
POLR2B-201ENST00000314595 TOM1O60784 492 aa6.86□□□□□ -1.31
POLR2B-201ENST00000314595 ZMYM3Q14202 1370 aa6.85□□□□□ -1.31
POLR2B-201ENST00000314595 PLEKHD1A6NEE1 506 aa6.85□□□□□ -1.31
POLR2B-201ENST00000314595 ARHGAP5Q13017 1502 aa6.85□□□□□ -1.31
POLR2B-201ENST00000314595 UBAP1LF5GYI3 381 aa6.85□□□□□ -1.31
POLR2B-201ENST00000314595 HSPA1LP34931 641 aa6.85□□□□□ -1.31
POLR2B-201ENST00000314595 EFCAB2Q5VUJ9 269 aa6.85□□□□□ -1.31
POLR2B-201ENST00000314595 LRP5O75197 1615 aa6.84□□□□□ -1.31
POLR2B-201ENST00000314595 SLIT1O75093 1534 aa6.84□□□□□ -1.31
POLR2B-201ENST00000314595 ZNF335Q9H4Z2 1342 aaPredicted RBP6.84□□□□□ -1.31
POLR2B-201ENST00000314595 CCDC18Q5T9S5 1454 aa6.84□□□□□ -1.31
POLR2B-201ENST00000314595 EIF2AK4Q9P2K8 1649 aaKnown RBP6.84□□□□□ -1.31
POLR2B-201ENST00000314595 RTEL1-TNFRSF6BF6WH68 1400 aa6.84□□□□□ -1.31
POLR2B-201ENST00000314595 RGS17Q9UGC6 210 aaPredicted RBP6.84□□□□□ -1.32
POLR2B-201ENST00000314595 FMN1Q68DA7 1419 aa6.83□□□□□ -1.32
POLR2B-201ENST00000314595 ARHGAP23Q9P227 1491 aa6.83□□□□□ -1.32
POLR2B-201ENST00000314595 CLIP1P30622 1438 aa6.83□□□□□ -1.32
POLR2B-201ENST00000314595 UBR1Q8IWV7 1749 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms