RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 RPRD2Q5VT52 1461 aaKnown RBP19.06■□□□□ 0.64
MKS1-201ENST00000313863 PPP4R2Q9NY27 417 aa19.04■□□□□ 0.64
MKS1-201ENST00000313863 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
MKS1-201ENST00000313863 CDK13Q14004 1512 aaKnown RBP19.03■□□□□ 0.64
MKS1-201ENST00000313863 DAPK1P53355 1430 aa19.03■□□□□ 0.64
MKS1-201ENST00000313863 ANKRD30BQ9BXX2 1392 aa19.02■□□□□ 0.64
MKS1-201ENST00000313863 PRKRIP1Q9H875 184 aaPredicted RBP19.02■□□□□ 0.63
MKS1-201ENST00000313863 ZBED9Q6R2W3 1325 aa19.01■□□□□ 0.63
MKS1-201ENST00000313863 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
MKS1-201ENST00000313863 MRS2Q9HD23 443 aa18.96■□□□□ 0.63
MKS1-201ENST00000313863 MRC2Q9UBG0 1479 aa18.96■□□□□ 0.63
MKS1-201ENST00000313863 ADGBQ8N7X0 1667 aa18.96■□□□□ 0.63
MKS1-201ENST00000313863 ABCC5O15440 1437 aa18.95■□□□□ 0.62
MKS1-201ENST00000313863 SPATA31E1Q6ZUB1 1445 aa18.95■□□□□ 0.62
MKS1-201ENST00000313863 ITSN2Q9NZM3 1697 aa18.94■□□□□ 0.62
MKS1-201ENST00000313863 KIAA0586Q9BVV6 1533 aa18.94■□□□□ 0.62
MKS1-201ENST00000313863 ERICH6Q7L0X2 663 aa18.94■□□□□ 0.62
MKS1-201ENST00000313863 KIAA0556O60303 1618 aa18.94■□□□□ 0.62
MKS1-201ENST00000313863 RAPGEF6Q8TEU7 1601 aa18.93■□□□□ 0.62
MKS1-201ENST00000313863 IRX6P78412 446 aaPredicted RBP18.93■□□□□ 0.62
MKS1-201ENST00000313863 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
MKS1-201ENST00000313863 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
MKS1-201ENST00000313863 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
MKS1-201ENST00000313863 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
MKS1-201ENST00000313863 C11orf95C9JLR9 678 aaPredicted RBP18.9■□□□□ 0.62
MKS1-201ENST00000313863 DISP1Q96F81 1524 aa18.89■□□□□ 0.62
MKS1-201ENST00000313863 NBPF8Q3BBV2 869 aa18.89■□□□□ 0.62
MKS1-201ENST00000313863 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
MKS1-201ENST00000313863 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
MKS1-201ENST00000313863 MSH5O43196 834 aa18.88■□□□□ 0.61
MKS1-201ENST00000313863 FOXD1Q16676 465 aa18.88■□□□□ 0.61
MKS1-201ENST00000313863 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
MKS1-201ENST00000313863 NUP153P49790 1475 aaKnown RBP18.88■□□□□ 0.61
MKS1-201ENST00000313863 KIF14Q15058 1648 aa18.87■□□□□ 0.61
MKS1-201ENST00000313863 CROCC2H7BZ55 1655 aa18.86■□□□□ 0.61
MKS1-201ENST00000313863 MBD5Q9P267 1494 aa18.86■□□□□ 0.61
MKS1-201ENST00000313863 SMG6Q86US8 1419 aaKnown RBP18.85■□□□□ 0.61
MKS1-201ENST00000313863 PZPP20742 1482 aa18.85■□□□□ 0.61
MKS1-201ENST00000313863 ADCY10Q96PN6 1610 aa18.84■□□□□ 0.61
MKS1-201ENST00000313863 ADGRL2O95490 1459 aa18.84■□□□□ 0.61
MKS1-201ENST00000313863 CAMSAP2Q08AD1 1489 aa18.83■□□□□ 0.61
MKS1-201ENST00000313863 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
MKS1-201ENST00000313863 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
MKS1-201ENST00000313863 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
MKS1-201ENST00000313863 DNAJC5BQ9UF47 199 aa18.81■□□□□ 0.6
MKS1-201ENST00000313863 GRIN2AQ12879 1464 aa18.81■□□□□ 0.6
MKS1-201ENST00000313863 KDM5CP41229 1560 aa18.79■□□□□ 0.6
MKS1-201ENST00000313863 DHX29Q7Z478 1369 aaKnown RBP18.79■□□□□ 0.6
MKS1-201ENST00000313863 USP47Q96K76 1375 aa18.79■□□□□ 0.6
MKS1-201ENST00000313863 ARID3CA6NKF2 412 aa18.78■□□□□ 0.6
MKS1-201ENST00000313863 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
MKS1-201ENST00000313863 ANKRD30AQ9BXX3 1397 aa18.77■□□□□ 0.6
MKS1-201ENST00000313863 ZNF644Q9H582 1327 aaPredicted RBP18.77■□□□□ 0.6
MKS1-201ENST00000313863 BCORL1Q5H9F3 1711 aa18.77■□□□□ 0.6
MKS1-201ENST00000313863 CFDP1Q9UEE9 299 aaPredicted RBP18.77■□□□□ 0.59
MKS1-201ENST00000313863 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
MKS1-201ENST00000313863 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
MKS1-201ENST00000313863 ARHGEF12Q9NZN5 1544 aa18.76■□□□□ 0.59
MKS1-201ENST00000313863 UHRF1BP1Q6BDS2 1440 aa18.75■□□□□ 0.59
MKS1-201ENST00000313863 GPATCH8Q9UKJ3 1502 aaKnown RBP18.74■□□□□ 0.59
MKS1-201ENST00000313863 RALGAPBQ86X10 1494 aa18.74■□□□□ 0.59
MKS1-201ENST00000313863 RNF123Q5XPI4 1314 aa18.74■□□□□ 0.59
MKS1-201ENST00000313863 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
MKS1-201ENST00000313863 EIF4G3O43432 1585 aaKnown RBP18.73■□□□□ 0.59
MKS1-201ENST00000313863 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
MKS1-201ENST00000313863 SHANK2Q9UPX8 1470 aa18.72■□□□□ 0.59
MKS1-201ENST00000313863 PRG4Q92954 1404 aaPredicted RBP18.71■□□□□ 0.59
MKS1-201ENST00000313863 PKD2Q13563 968 aa18.69■□□□□ 0.58
MKS1-201ENST00000313863 KDM5DQ9BY66 1539 aa18.69■□□□□ 0.58
MKS1-201ENST00000313863 ANKRD50Q9ULJ7 1429 aa18.69■□□□□ 0.58
MKS1-201ENST00000313863 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
MKS1-201ENST00000313863 CARMIL2Q6F5E8 1435 aa18.67■□□□□ 0.58
MKS1-201ENST00000313863 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
MKS1-201ENST00000313863 CCDC136Q96JN2 1154 aa18.65■□□□□ 0.58
MKS1-201ENST00000313863 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
MKS1-201ENST00000313863 TMC1Q8TDI8 760 aa18.65■□□□□ 0.58
MKS1-201ENST00000313863 CEP170Q5SW79 1584 aa18.65■□□□□ 0.58
MKS1-201ENST00000313863 BRD4O60885 1362 aaPredicted RBP18.64■□□□□ 0.57
MKS1-201ENST00000313863 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
MKS1-201ENST00000313863 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
MKS1-201ENST00000313863 PLB1Q6P1J6 1458 aa18.63■□□□□ 0.57
MKS1-201ENST00000313863 POLR3GLQ9BT43 218 aa18.63■□□□□ 0.57
MKS1-201ENST00000313863 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
MKS1-201ENST00000313863 E9PCH4 1651 aa18.63■□□□□ 0.57
MKS1-201ENST00000313863 RALBP1Q15311 655 aa18.62■□□□□ 0.57
MKS1-201ENST00000313863 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
MKS1-201ENST00000313863 CARD11Q9BXL7 1154 aa18.61■□□□□ 0.57
MKS1-201ENST00000313863 C9orf84Q5VXU9 1444 aa18.61■□□□□ 0.57
MKS1-201ENST00000313863 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
MKS1-201ENST00000313863 NUP160Q12769 1436 aa18.6■□□□□ 0.57
MKS1-201ENST00000313863 NUP155O75694 1391 aa18.6■□□□□ 0.57
MKS1-201ENST00000313863 MYBBP1AQ9BQG0 1328 aaKnown RBP18.6■□□□□ 0.57
MKS1-201ENST00000313863 ANP32AP39687 249 aaKnown RBP18.59■□□□□ 0.57
MKS1-201ENST00000313863 ABCC10Q5T3U5 1492 aa18.59■□□□□ 0.57
MKS1-201ENST00000313863 ABCA8O94911 1581 aa18.59■□□□□ 0.57
MKS1-201ENST00000313863 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
MKS1-201ENST00000313863 CHMP7Q8WUX9 453 aaPredicted RBP18.57■□□□□ 0.56
MKS1-201ENST00000313863 PTPRGP23470 1445 aa18.57■□□□□ 0.56
MKS1-201ENST00000313863 PLEKHD1A6NEE1 506 aa18.56■□□□□ 0.56
MKS1-201ENST00000313863 TSPY4P0CV99 314 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms