RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
GPBP1-202ENST00000309096 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
GPBP1-202ENST00000309096 G3V3G9 751 aa11.42□□□□□ -0.58
GPBP1-202ENST00000309096 TMEM92Q6UXU6 159 aa11.41□□□□□ -0.58
GPBP1-202ENST00000309096 C3orf67Q6ZVT6 689 aa11.41□□□□□ -0.58
GPBP1-202ENST00000309096 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.59
GPBP1-202ENST00000309096 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
GPBP1-202ENST00000309096 KIF3CO14782 793 aa11.36□□□□□ -0.59
GPBP1-202ENST00000309096 NCKAP5LQ9HCH0 1330 aa11.34□□□□□ -0.59
GPBP1-202ENST00000309096 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
GPBP1-202ENST00000309096 CDAN1Q8IWY9 1227 aa11.33□□□□□ -0.6
GPBP1-202ENST00000309096 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
GPBP1-202ENST00000309096 ST18O60284 1047 aa11.32□□□□□ -0.6
GPBP1-202ENST00000309096 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
GPBP1-202ENST00000309096 HAP1P54257 671 aaPredicted RBP11.29□□□□□ -0.6
GPBP1-202ENST00000309096 GPHNQ9NQX3 736 aaPredicted RBP11.29□□□□□ -0.6
GPBP1-202ENST00000309096 SNPHO15079 494 aa11.27□□□□□ -0.61
GPBP1-202ENST00000309096 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
GPBP1-202ENST00000309096 MFSD10Q14728 455 aa11.25□□□□□ -0.61
GPBP1-202ENST00000309096 PDE4AP27815 886 aa11.24□□□□□ -0.61
GPBP1-202ENST00000309096 FOXK1P85037 733 aa11.24□□□□□ -0.61
GPBP1-202ENST00000309096 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
GPBP1-202ENST00000309096 DSG2Q14126 1118 aa11.23□□□□□ -0.61
GPBP1-202ENST00000309096 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
GPBP1-202ENST00000309096 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
GPBP1-202ENST00000309096 PPP1R15BQ5SWA1 713 aa11.18□□□□□ -0.62
GPBP1-202ENST00000309096 VSIG10Q8N0Z9 540 aa11.18□□□□□ -0.62
GPBP1-202ENST00000309096 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
GPBP1-202ENST00000309096 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
GPBP1-202ENST00000309096 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
GPBP1-202ENST00000309096 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
GPBP1-202ENST00000309096 SLC34A2O95436 690 aa11.13□□□□□ -0.63
GPBP1-202ENST00000309096 WDR70Q9NW82 654 aa11.13□□□□□ -0.63
GPBP1-202ENST00000309096 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
GPBP1-202ENST00000309096 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
GPBP1-202ENST00000309096 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
GPBP1-202ENST00000309096 EMP3P54852 163 aa11.07□□□□□ -0.64
GPBP1-202ENST00000309096 PTCD2Q8WV60 388 aaKnown RBP11.07□□□□□ -0.64
GPBP1-202ENST00000309096 OXER1Q8TDS5 423 aa11.06□□□□□ -0.64
GPBP1-202ENST00000309096 GPR153Q6NV75 609 aa11.05□□□□□ -0.64
GPBP1-202ENST00000309096 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
GPBP1-202ENST00000309096 SPNS2Q8IVW8 549 aa11.04□□□□□ -0.64
GPBP1-202ENST00000309096 E2F4Q16254 413 aa11.03□□□□□ -0.64
GPBP1-202ENST00000309096 RIMBP2O15034 1052 aa11.03□□□□□ -0.64
GPBP1-202ENST00000309096 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
GPBP1-202ENST00000309096 PCDHGA4Q9Y5G9 962 aa11.03□□□□□ -0.64
GPBP1-202ENST00000309096 KDM4FA0A1W2PPD8 638 aa11.02□□□□□ -0.65
GPBP1-202ENST00000309096 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
GPBP1-202ENST00000309096 MMRN1Q13201 1228 aa11.02□□□□□ -0.65
GPBP1-202ENST00000309096 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
GPBP1-202ENST00000309096 UPF1Q92900 1129 aaKnown RBP eCLIP11.01□□□□□ -0.65
GPBP1-202ENST00000309096 FAM205CA6NFA0 338 aa11□□□□□ -0.65
GPBP1-202ENST00000309096 ARSIQ5FYB1 569 aa11□□□□□ -0.65
GPBP1-202ENST00000309096 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.654e-7■■■■□ 25.4
GPBP1-202ENST00000309096 ARIH1Q9Y4X5 557 aaPredicted RBP11□□□□□ -0.65
GPBP1-202ENST00000309096 P3H3Q8IVL6 736 aa10.98□□□□□ -0.65
GPBP1-202ENST00000309096 DPYSL4O14531 572 aa10.96□□□□□ -0.65
GPBP1-202ENST00000309096 HS3ST6Q96QI5 342 aa10.96□□□□□ -0.65
GPBP1-202ENST00000309096 NUDT7P0C024 238 aa10.94□□□□□ -0.66
GPBP1-202ENST00000309096 TBC1D12O60347 775 aa10.93□□□□□ -0.66
GPBP1-202ENST00000309096 MAP3K9P80192 1104 aa10.92□□□□□ -0.66
GPBP1-202ENST00000309096 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
GPBP1-202ENST00000309096 PDIA6Q15084 440 aa10.91□□□□□ -0.66
GPBP1-202ENST00000309096 ANO8Q9HCE9 1232 aaPredicted RBP10.9□□□□□ -0.66
GPBP1-202ENST00000309096 POTEB3A0JP26 581 aa10.9□□□□□ -0.67
GPBP1-202ENST00000309096 EVI5O60447 810 aa10.9□□□□□ -0.67
GPBP1-202ENST00000309096 POTEBQ6S5H4 581 aa10.9□□□□□ -0.67
GPBP1-202ENST00000309096 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
GPBP1-202ENST00000309096 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
GPBP1-202ENST00000309096 LHX6Q9UPM6 363 aa10.87□□□□□ -0.67
GPBP1-202ENST00000309096 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
GPBP1-202ENST00000309096 ERBB3P21860 1342 aa10.85□□□□□ -0.67
GPBP1-202ENST00000309096 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
GPBP1-202ENST00000309096 PTGER2P43116 358 aa10.83□□□□□ -0.68
GPBP1-202ENST00000309096 VARS2Q5ST30 1063 aaKnown RBP10.81□□□□□ -0.68
GPBP1-202ENST00000309096 FOSBP53539 338 aa10.8□□□□□ -0.68
GPBP1-202ENST00000309096 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
GPBP1-202ENST00000309096 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.68
GPBP1-202ENST00000309096 PCDHGA10Q9Y5H3 936 aa10.77□□□□□ -0.68
GPBP1-202ENST00000309096 SEMA3EO15041 775 aa10.77□□□□□ -0.69
GPBP1-202ENST00000309096 NBR1Q14596 966 aa10.77□□□□□ -0.69
GPBP1-202ENST00000309096 PHF14O94880 888 aa10.76□□□□□ -0.69
GPBP1-202ENST00000309096 DDX12PQ92771 950 aa10.76□□□□□ -0.69
GPBP1-202ENST00000309096 MLLT3P42568 568 aaPredicted RBP10.75□□□□□ -0.69
GPBP1-202ENST00000309096 ZNF454Q8N9F8 522 aa10.75□□□□□ -0.69
GPBP1-202ENST00000309096 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
GPBP1-202ENST00000309096 ZNF687Q8N1G0 1237 aa10.74□□□□□ -0.69
GPBP1-202ENST00000309096 TESPA1A2RU30 521 aaPredicted RBP10.73□□□□□ -0.69
GPBP1-202ENST00000309096 PPP4R3BQ5MIZ7 849 aa10.73□□□□□ -0.69
GPBP1-202ENST00000309096 BCANQ96GW7 911 aa10.73□□□□□ -0.69
GPBP1-202ENST00000309096 PRIM1P49642 420 aaKnown RBP10.72□□□□□ -0.69
GPBP1-202ENST00000309096 TULP1O00294 542 aaPredicted RBP10.7□□□□□ -0.7
GPBP1-202ENST00000309096 OSBPP22059 807 aa10.7□□□□□ -0.7
GPBP1-202ENST00000309096 TYW1BQ6NUM6 668 aa10.7□□□□□ -0.7
GPBP1-202ENST00000309096 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
GPBP1-202ENST00000309096 EPAS1Q99814 870 aa10.7□□□□□ -0.7
GPBP1-202ENST00000309096 ADAM33Q9BZ11 813 aa10.7□□□□□ -0.7
GPBP1-202ENST00000309096 GRXCR2A6NFK2 248 aa10.69□□□□□ -0.7
GPBP1-202ENST00000309096 BCL2L12Q9HB09 334 aa10.69□□□□□ -0.7
GPBP1-202ENST00000309096 FBXW7Q969H0 707 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms