RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 AMER1Q5JTC6 1135 aaPredicted RBP25.96■■□□□ 1.75
MTCL1-201ENST00000306329 RTF1Q92541 710 aaKnown RBP25.95■■□□□ 1.75
MTCL1-201ENST00000306329 HSPA5P11021 654 aaKnown RBP25.95■■□□□ 1.74
MTCL1-201ENST00000306329 NCBP3Q53F19 620 aaKnown RBP25.94■■□□□ 1.74
MTCL1-201ENST00000306329 KANK1Q14678 1352 aa25.94■■□□□ 1.74
MTCL1-201ENST00000306329 KIAA1211Q6ZU35 1233 aa25.92■■□□□ 1.74
MTCL1-201ENST00000306329 GZF1Q9H116 711 aaPredicted RBP25.91■■□□□ 1.74
MTCL1-201ENST00000306329 GBP4Q96PP9 640 aa25.91■■□□□ 1.74
MTCL1-201ENST00000306329 IPO8O15397 1037 aaKnown RBP25.9■■□□□ 1.74
MTCL1-201ENST00000306329 KTN1Q86UP2 1357 aaKnown RBP25.89■■□□□ 1.74
MTCL1-201ENST00000306329 SLKQ9H2G2 1235 aaPredicted RBP25.89■■□□□ 1.73
MTCL1-201ENST00000306329 MLECQ14165 292 aa25.87■■□□□ 1.73
MTCL1-201ENST00000306329 ITPRIPQ8IWB1 547 aa25.86■■□□□ 1.73
MTCL1-201ENST00000306329 TIMELESSQ9UNS1 1208 aa25.86■■□□□ 1.73
MTCL1-201ENST00000306329 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
MTCL1-201ENST00000306329 RCAN3Q9UKA8 241 aa25.85■■□□□ 1.73
MTCL1-201ENST00000306329 KIAA2012Q0VF49 1180 aa25.85■■□□□ 1.73
MTCL1-201ENST00000306329 STK26Q9P289 416 aa25.84■■□□□ 1.73
MTCL1-201ENST00000306329 ARID3AQ99856 593 aa25.84■■□□□ 1.73
MTCL1-201ENST00000306329 HDGFP51858 240 aaKnown RBP25.84■■□□□ 1.73
MTCL1-201ENST00000306329 RWDD1Q9H446 243 aaPredicted RBP25.83■■□□□ 1.73
MTCL1-201ENST00000306329 PTMSP20962 102 aa25.83■■□□□ 1.73
MTCL1-201ENST00000306329 FHAD1B1AJZ9 1412 aa25.82■■□□□ 1.72
MTCL1-201ENST00000306329 HDGFL2Q7Z4V5 671 aaPredicted RBP25.81■■□□□ 1.72
MTCL1-201ENST00000306329 U2AF1L5P0DN76 240 aaPredicted RBP25.81■■□□□ 1.72
MTCL1-201ENST00000306329 U2AF1Q01081 240 aaKnown RBP eCLIP25.81■■□□□ 1.72
MTCL1-201ENST00000306329 PKD2Q13563 968 aa25.78■■□□□ 1.72
MTCL1-201ENST00000306329 FOXD1Q16676 465 aa25.77■■□□□ 1.72
MTCL1-201ENST00000306329 TCERG1O14776 1098 aaKnown RBP25.77■■□□□ 1.72
MTCL1-201ENST00000306329 SETD5Q9C0A6 1442 aa25.77■■□□□ 1.72
MTCL1-201ENST00000306329 EIF4G1Q04637 1599 aaKnown RBP25.76■■□□□ 1.71
MTCL1-201ENST00000306329 MFAP1P55081 439 aaKnown RBP25.75■■□□□ 1.71
MTCL1-201ENST00000306329 ZNF330Q9Y3S2 320 aaPredicted RBP25.75■■□□□ 1.71
MTCL1-201ENST00000306329 CALD1Q05682 793 aaKnown RBP25.75■■□□□ 1.71
MTCL1-201ENST00000306329 HTATSF1O43719 755 aaKnown RBP25.74■■□□□ 1.71
MTCL1-201ENST00000306329 SYAP1Q96A49 352 aaPredicted RBP25.74■■□□□ 1.71
MTCL1-201ENST00000306329 GGT6Q6P531 493 aa25.73■■□□□ 1.71
MTCL1-201ENST00000306329 PAK3O75914 559 aaPredicted RBP25.71■■□□□ 1.71
MTCL1-201ENST00000306329 NOC3LQ8WTT2 800 aaKnown RBP25.71■■□□□ 1.71
MTCL1-201ENST00000306329 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
MTCL1-201ENST00000306329 RALBP1Q15311 655 aa25.7■■□□□ 1.7
MTCL1-201ENST00000306329 ROCK2O75116 1388 aaKnown RBP25.7■■□□□ 1.7
MTCL1-201ENST00000306329 PMFBP1Q8TBY8 1022 aa25.69■■□□□ 1.7
MTCL1-201ENST00000306329 GOLGA6L3A6NEY3 463 aa25.69■■□□□ 1.7
MTCL1-201ENST00000306329 ERCC6Q03468 1493 aa25.67■■□□□ 1.7
MTCL1-201ENST00000306329 HSP90B1P14625 803 aaKnown RBP25.67■■□□□ 1.7
MTCL1-201ENST00000306329 TPM4P67936 248 aa25.66■■□□□ 1.7
MTCL1-201ENST00000306329 CSB-PGBD3P0DP91 1061 aa25.66■■□□□ 1.7
MTCL1-201ENST00000306329 SMC4Q9NTJ3 1288 aa25.66■■□□□ 1.7
MTCL1-201ENST00000306329 CARMIL1Q5VZK9 1371 aa25.65■■□□□ 1.7
MTCL1-201ENST00000306329 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
MTCL1-201ENST00000306329 TRIM6-TRIM34B2RNG4 842 aa25.65■■□□□ 1.7
MTCL1-201ENST00000306329 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.65■■□□□ 1.7
MTCL1-201ENST00000306329 STK31Q9BXU1 1019 aa25.64■■□□□ 1.7
MTCL1-201ENST00000306329 GORABQ5T7V8 394 aa25.64■■□□□ 1.69
MTCL1-201ENST00000306329 FOXD4L1Q9NU39 408 aa25.63■■□□□ 1.69
MTCL1-201ENST00000306329 CHMP3Q9Y3E7 222 aa25.62■■□□□ 1.69
MTCL1-201ENST00000306329 NOL8Q76FK4 1167 aaKnown RBP25.62■■□□□ 1.69
MTCL1-201ENST00000306329 CLUAP1Q96AJ1 413 aa25.6■■□□□ 1.69
MTCL1-201ENST00000306329 IPO9Q96P70 1041 aaKnown RBP25.6■■□□□ 1.69
MTCL1-201ENST00000306329 GPATCH3Q96I76 525 aa25.6■■□□□ 1.69
MTCL1-201ENST00000306329 SPAG9O60271 1321 aaKnown RBP25.59■■□□□ 1.69
MTCL1-201ENST00000306329 CUX2O14529 1486 aa25.58■■□□□ 1.69
MTCL1-201ENST00000306329 HMMRO75330 724 aa25.57■■□□□ 1.68
MTCL1-201ENST00000306329 CCDC146Q8IYE0 955 aa25.57■■□□□ 1.68
MTCL1-201ENST00000306329 TRHP20396 242 aaPredicted RBP25.57■■□□□ 1.68
MTCL1-201ENST00000306329 MPHOSPH9Q99550 1183 aa25.57■■□□□ 1.68
MTCL1-201ENST00000306329 SLC4A10Q6U841 1118 aa25.56■■□□□ 1.68
MTCL1-201ENST00000306329 TSHZ2Q9NRE2 1034 aa25.56■■□□□ 1.68
MTCL1-201ENST00000306329 TAF7LQ5H9L4 462 aa25.55■■□□□ 1.68
MTCL1-201ENST00000306329 CCDC34Q96HJ3 373 aa25.55■■□□□ 1.68
MTCL1-201ENST00000306329 TNNT3P45378 269 aaPredicted RBP25.54■■□□□ 1.68
MTCL1-201ENST00000306329 SOGA1O94964 1423 aa25.54■■□□□ 1.68
MTCL1-201ENST00000306329 KANK4Q5T7N3 995 aaPredicted RBP25.54■■□□□ 1.68
MTCL1-201ENST00000306329 CSPP1Q1MSJ5 1256 aa25.54■■□□□ 1.68
MTCL1-201ENST00000306329 NUP155O75694 1391 aa25.54■■□□□ 1.68
MTCL1-201ENST00000306329 PDE4CQ08493 712 aa25.53■■□□□ 1.68
MTCL1-201ENST00000306329 RASSF8Q8NHQ8 419 aa25.53■■□□□ 1.68
MTCL1-201ENST00000306329 CHMP4AQ9BY43 222 aa25.52■■□□□ 1.68
MTCL1-201ENST00000306329 CENPJQ9HC77 1338 aaPredicted RBP25.52■■□□□ 1.68
MTCL1-201ENST00000306329 RAB3GAP2Q9H2M9 1393 aa25.51■■□□□ 1.67
MTCL1-201ENST00000306329 CREBRFQ8IUR6 639 aa25.51■■□□□ 1.67
MTCL1-201ENST00000306329 GOLGA6L1Q8N7Z2 621 aa25.5■■□□□ 1.67
MTCL1-201ENST00000306329 A0A0U1RQG5 324 aaPredicted RBP25.5■■□□□ 1.67
MTCL1-201ENST00000306329 EIF3AQ14152 1382 aaKnown RBP25.5■■□□□ 1.67
MTCL1-201ENST00000306329 VPS8Q8N3P4 1428 aa25.49■■□□□ 1.67
MTCL1-201ENST00000306329 FOXD4L5Q5VV16 416 aaPredicted RBP25.49■■□□□ 1.67
MTCL1-201ENST00000306329 FOXD4L4Q8WXT5 416 aaPredicted RBP25.49■■□□□ 1.67
MTCL1-201ENST00000306329 HDAC5Q9UQL6 1122 aa25.48■■□□□ 1.67
MTCL1-201ENST00000306329 TMX4Q9H1E5 349 aaPredicted RBP25.45■■□□□ 1.66
MTCL1-201ENST00000306329 TERF2IPQ9NYB0 399 aa25.45■■□□□ 1.66
MTCL1-201ENST00000306329 ST18O60284 1047 aa25.45■■□□□ 1.66
MTCL1-201ENST00000306329 KIF16BQ96L93 1317 aa25.44■■□□□ 1.66
MTCL1-201ENST00000306329 TOMM22Q9NS69 142 aa25.43■■□□□ 1.66
MTCL1-201ENST00000306329 NLRP13Q86W25 1043 aa25.43■■□□□ 1.66
MTCL1-201ENST00000306329 PHF14O94880 888 aa25.43■■□□□ 1.66
MTCL1-201ENST00000306329 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
MTCL1-201ENST00000306329 PDE3BQ13370 1112 aa25.41■■□□□ 1.66
MTCL1-201ENST00000306329 PRM3Q9NNZ6 103 aa25.4■■□□□ 1.66
MTCL1-201ENST00000306329 TPM3P06753 285 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms