RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 KIF14Q15058 1648 aa7.86□□□□□ -1.15
VPS50-202ENST00000305866 SYNJ2O15056 1496 aa7.86□□□□□ -1.15
VPS50-202ENST00000305866 ARHGEF5Q12774 1597 aa7.86□□□□□ -1.15
VPS50-202ENST00000305866 MAST1Q9Y2H9 1570 aa7.85□□□□□ -1.15
VPS50-202ENST00000305866 RBM19Q9Y4C8 960 aaKnown RBP7.84□□□□□ -1.15
VPS50-202ENST00000305866 ABCC10Q5T3U5 1492 aa7.83□□□□□ -1.16
VPS50-202ENST00000305866 TDRD9Q8NDG6 1382 aaKnown RBP7.83□□□□□ -1.16
VPS50-202ENST00000305866 PZPP20742 1482 aa7.83□□□□□ -1.16
VPS50-202ENST00000305866 RPRD2Q5VT52 1461 aaKnown RBP7.83□□□□□ -1.16
VPS50-202ENST00000305866 RNF123Q5XPI4 1314 aa7.83□□□□□ -1.16
VPS50-202ENST00000305866 WASHC2AQ641Q2 1341 aa7.83□□□□□ -1.16
VPS50-202ENST00000305866 DHX29Q7Z478 1369 aaKnown RBP7.82□□□□□ -1.16
VPS50-202ENST00000305866 ZNF608Q9ULD9 1512 aaPredicted RBP7.82□□□□□ -1.16
VPS50-202ENST00000305866 LAMC1P11047 1609 aa7.82□□□□□ -1.16
VPS50-202ENST00000305866 DAPK1P53355 1430 aa7.81□□□□□ -1.16
VPS50-202ENST00000305866 FANCIQ9NVI1 1328 aa7.81□□□□□ -1.16
VPS50-202ENST00000305866 CNTLNQ9NXG0 1405 aa7.81□□□□□ -1.16
VPS50-202ENST00000305866 C11orf95C9JLR9 678 aaPredicted RBP7.81□□□□□ -1.16
VPS50-202ENST00000305866 PTPRGP23470 1445 aa7.81□□□□□ -1.16
VPS50-202ENST00000305866 VIRMAQ69YN4 1812 aaKnown RBP7.8□□□□□ -1.16
VPS50-202ENST00000305866 MYO5CQ9NQX4 1742 aa7.8□□□□□ -1.16
VPS50-202ENST00000305866 CDK13Q14004 1512 aaKnown RBP7.8□□□□□ -1.16
VPS50-202ENST00000305866 CCDC184Q52MB2 194 aa7.8□□□□□ -1.16
VPS50-202ENST00000305866 ABCC5O15440 1437 aa7.8□□□□□ -1.16
VPS50-202ENST00000305866 TROQ12816 1431 aaPredicted RBP7.79□□□□□ -1.16
VPS50-202ENST00000305866 ANKRD30BQ9BXX2 1392 aa7.79□□□□□ -1.16
VPS50-202ENST00000305866 PREX2Q70Z35 1606 aa7.79□□□□□ -1.16
VPS50-202ENST00000305866 TRPM1Q7Z4N2 1603 aa7.79□□□□□ -1.16
VPS50-202ENST00000305866 UNC13BO14795 1591 aa7.78□□□□□ -1.16
VPS50-202ENST00000305866 ARHGEF12Q9NZN5 1544 aa7.78□□□□□ -1.16
VPS50-202ENST00000305866 BCL11AQ9H165 835 aa7.78□□□□□ -1.16
VPS50-202ENST00000305866 UHRF1BP1Q6BDS2 1440 aa7.78□□□□□ -1.16
VPS50-202ENST00000305866 NEURL4Q96JN8 1562 aa7.78□□□□□ -1.16
VPS50-202ENST00000305866 MTUS2Q5JR59 1369 aa7.78□□□□□ -1.16
VPS50-202ENST00000305866 DDX10Q13206 875 aaKnown RBP7.78□□□□□ -1.16
VPS50-202ENST00000305866 PLXNC1O60486 1568 aa7.78□□□□□ -1.16
VPS50-202ENST00000305866 GPATCH8Q9UKJ3 1502 aaKnown RBP7.78□□□□□ -1.16
VPS50-202ENST00000305866 MAGI2Q86UL8 1455 aa7.77□□□□□ -1.17
VPS50-202ENST00000305866 RNF17Q9BXT8 1623 aaKnown RBP7.77□□□□□ -1.17
VPS50-202ENST00000305866 CAMSAP2Q08AD1 1489 aa7.76□□□□□ -1.17
VPS50-202ENST00000305866 FKBP8Q14318 412 aa7.75□□□□□ -1.17
VPS50-202ENST00000305866 CDC42BPBQ9Y5S2 1711 aa7.75□□□□□ -1.17
VPS50-202ENST00000305866 ARAP3Q8WWN8 1544 aa7.75□□□□□ -1.17
VPS50-202ENST00000305866 CCDC7Q96M83 1385 aa7.74□□□□□ -1.17
VPS50-202ENST00000305866 MYOM1P52179 1685 aa7.73□□□□□ -1.17
VPS50-202ENST00000305866 ATP10AO60312 1499 aa7.73□□□□□ -1.17
VPS50-202ENST00000305866 DNAJC5BQ9UF47 199 aa7.73□□□□□ -1.17
VPS50-202ENST00000305866 UHRF1BP1LA0JNW5 1464 aa7.72□□□□□ -1.17
VPS50-202ENST00000305866 CLASP1Q7Z460 1538 aa7.72□□□□□ -1.17
VPS50-202ENST00000305866 IQGAP3Q86VI3 1631 aa7.72□□□□□ -1.17
VPS50-202ENST00000305866 RANGAP1P46060 587 aaPredicted RBP7.72□□□□□ -1.17
VPS50-202ENST00000305866 HIRIP3Q9BW71 556 aaPredicted RBP7.72□□□□□ -1.17
VPS50-202ENST00000305866 LRPPRCP42704 1394 aaKnown RBP7.72□□□□□ -1.17
VPS50-202ENST00000305866 SMG6Q86US8 1419 aaKnown RBP7.71□□□□□ -1.17
VPS50-202ENST00000305866 ZMYM4Q5VZL5 1548 aa7.71□□□□□ -1.18
VPS50-202ENST00000305866 NBPF8Q3BBV2 869 aa7.71□□□□□ -1.18
VPS50-202ENST00000305866 SAMD9LQ8IVG5 1584 aa7.71□□□□□ -1.18
VPS50-202ENST00000305866 DEPDC5O75140 1603 aa7.71□□□□□ -1.18
VPS50-202ENST00000305866 ATP10BO94823 1461 aa7.7□□□□□ -1.18
VPS50-202ENST00000305866 ERICH6BQ5W0A0 696 aa7.7□□□□□ -1.18
VPS50-202ENST00000305866 RALGAPBQ86X10 1494 aa7.7□□□□□ -1.18
VPS50-202ENST00000305866 IQGAP1P46940 1657 aa7.69□□□□□ -1.18
VPS50-202ENST00000305866 CHD1O14646 1710 aa7.69□□□□□ -1.18
VPS50-202ENST00000305866 ARID4BQ4LE39 1312 aaPredicted RBP7.69□□□□□ -1.18
VPS50-202ENST00000305866 KIAA1107Q9UPP5 1409 aa7.68□□□□□ -1.18
VPS50-202ENST00000305866 HSPA5P11021 654 aaKnown RBP7.68□□□□□ -1.18
VPS50-202ENST00000305866 TRIM52Q96A61 297 aa7.68□□□□□ -1.18
VPS50-202ENST00000305866 ZBED9Q6R2W3 1325 aa7.68□□□□□ -1.18
VPS50-202ENST00000305866 CARMIL2Q6F5E8 1435 aa7.68□□□□□ -1.18
VPS50-202ENST00000305866 PLB1Q6P1J6 1458 aa7.67□□□□□ -1.18
VPS50-202ENST00000305866 PRDM15P57071 1507 aaPredicted RBP7.67□□□□□ -1.18
VPS50-202ENST00000305866 PRKRIP1Q9H875 184 aaPredicted RBP7.67□□□□□ -1.18
VPS50-202ENST00000305866 INSRP06213 1382 aa7.67□□□□□ -1.18
VPS50-202ENST00000305866 VWDEQ8N2E2 1590 aa7.67□□□□□ -1.18
VPS50-202ENST00000305866 ERCC6Q03468 1493 aa7.66□□□□□ -1.18
VPS50-202ENST00000305866 ITGAEP38570 1179 aa7.66□□□□□ -1.18
VPS50-202ENST00000305866 WDR7Q9Y4E6 1490 aa7.66□□□□□ -1.18
VPS50-202ENST00000305866 IFT172Q9UG01 1749 aa7.66□□□□□ -1.18
VPS50-202ENST00000305866 ABCC2Q92887 1545 aa7.66□□□□□ -1.18
VPS50-202ENST00000305866 BCANQ96GW7 911 aa7.66□□□□□ -1.18
VPS50-202ENST00000305866 KIF7Q2M1P5 1343 aa7.65□□□□□ -1.18
VPS50-202ENST00000305866 PRG4Q92954 1404 aaPredicted RBP7.65□□□□□ -1.19
VPS50-202ENST00000305866 KIAA1210Q9ULL0 1709 aa7.65□□□□□ -1.19
VPS50-202ENST00000305866 TONSLQ96HA7 1378 aa7.64□□□□□ -1.19
VPS50-202ENST00000305866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.64□□□□□ -1.19
VPS50-202ENST00000305866 EIF2AK4Q9P2K8 1649 aaKnown RBP7.64□□□□□ -1.19
VPS50-202ENST00000305866 FAM50AQ14320 339 aaKnown RBP7.64□□□□□ -1.19
VPS50-202ENST00000305866 TTC37Q6PGP7 1564 aa7.63□□□□□ -1.19
VPS50-202ENST00000305866 PLEKHH2Q8IVE3 1493 aa7.63□□□□□ -1.19
VPS50-202ENST00000305866 MPHOSPH9Q99550 1183 aa7.63□□□□□ -1.19
VPS50-202ENST00000305866 GPRASP1Q5JY77 1395 aa7.63□□□□□ -1.19
VPS50-202ENST00000305866 ABCA9Q8IUA7 1624 aa7.63□□□□□ -1.19
VPS50-202ENST00000305866 ZC3H13Q5T200 1668 aaKnown RBP7.63□□□□□ -1.19
VPS50-202ENST00000305866 SPHKAPQ2M3C7 1700 aa7.62□□□□□ -1.19
VPS50-202ENST00000305866 CEP152O94986 1710 aa7.62□□□□□ -1.19
VPS50-202ENST00000305866 PLA2R1Q13018 1463 aa7.62□□□□□ -1.19
VPS50-202ENST00000305866 P3H3Q8IVL6 736 aa7.62□□□□□ -1.19
VPS50-202ENST00000305866 CCDC141Q6ZP82 1450 aa7.62□□□□□ -1.19
VPS50-202ENST00000305866 L3MBTL2Q969R5 705 aa7.62□□□□□ -1.19
VPS50-202ENST00000305866 ABCC1P33527 1531 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms