RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 ERICH6BQ5W0A0 696 aa21.4■■□□□ 1.02
PDS5A-201ENST00000303538 NRDCO43847 1150 aa21.39■■□□□ 1.01
PDS5A-201ENST00000303538 TMF1P82094 1093 aa21.39■■□□□ 1.01
PDS5A-201ENST00000303538 DRC7Q8IY82 874 aa21.39■■□□□ 1.01
PDS5A-201ENST00000303538 NAP1L5Q96NT1 182 aaPredicted RBP21.39■■□□□ 1.01
PDS5A-201ENST00000303538 MS4A1P11836 297 aa21.36■■□□□ 1.01
PDS5A-201ENST00000303538 RTN4Q9NQC3 1192 aaKnown RBP21.36■■□□□ 1.01
PDS5A-201ENST00000303538 MCCP23508 829 aa21.34■■□□□ 1.01
PDS5A-201ENST00000303538 GORABQ5T7V8 394 aa21.34■■□□□ 1.01
PDS5A-201ENST00000303538 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
PDS5A-201ENST00000303538 TAF7LQ5H9L4 462 aa21.33■■□□□ 1.01
PDS5A-201ENST00000303538 HDGFL2Q7Z4V5 671 aaPredicted RBP21.31■■□□□ 1
PDS5A-201ENST00000303538 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
PDS5A-201ENST00000303538 HSCBQ8IWL3 235 aa21.3■■□□□ 1
PDS5A-201ENST00000303538 KIAA1211Q6ZU35 1233 aa21.3■■□□□ 1
PDS5A-201ENST00000303538 B4GALNT3Q6L9W6 998 aa21.29■■□□□ 1
PDS5A-201ENST00000303538 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
PDS5A-201ENST00000303538 GTF2E1P29083 439 aaPredicted RBP21.27■□□□□ 0.99
PDS5A-201ENST00000303538 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
PDS5A-201ENST00000303538 KIAA2012Q0VF49 1180 aa21.26■□□□□ 0.99
PDS5A-201ENST00000303538 FRAT2O75474 233 aaPredicted RBP21.25■□□□□ 0.99
PDS5A-201ENST00000303538 NOC3LQ8WTT2 800 aaKnown RBP21.24■□□□□ 0.99
PDS5A-201ENST00000303538 VPS53Q5VIR6 699 aa21.23■□□□□ 0.99
PDS5A-201ENST00000303538 U2AF1L5P0DN76 240 aaPredicted RBP21.22■□□□□ 0.99
PDS5A-201ENST00000303538 U2AF1Q01081 240 aaKnown RBP eCLIP21.22■□□□□ 0.991e-7■■■■■ 28.2
PDS5A-201ENST00000303538 EVA1CP58658 441 aa21.22■□□□□ 0.99
PDS5A-201ENST00000303538 KRI1Q8N9T8 703 aaKnown RBP21.21■□□□□ 0.99
PDS5A-201ENST00000303538 CREBRFQ8IUR6 639 aa21.21■□□□□ 0.99
PDS5A-201ENST00000303538 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
PDS5A-201ENST00000303538 HSP90B1P14625 803 aaKnown RBP21.19■□□□□ 0.98
PDS5A-201ENST00000303538 CHAF1AQ13111 956 aaPredicted RBP21.19■□□□□ 0.98
PDS5A-201ENST00000303538 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
PDS5A-201ENST00000303538 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
PDS5A-201ENST00000303538 FOXD1Q16676 465 aa21.19■□□□□ 0.98
PDS5A-201ENST00000303538 NGDNQ8NEJ9 315 aaKnown RBP21.18■□□□□ 0.98
PDS5A-201ENST00000303538 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
PDS5A-201ENST00000303538 TOMM22Q9NS69 142 aa21.17■□□□□ 0.98
PDS5A-201ENST00000303538 RASSF8Q8NHQ8 419 aa21.17■□□□□ 0.98
PDS5A-201ENST00000303538 ITPRIPQ8IWB1 547 aa21.17■□□□□ 0.98
PDS5A-201ENST00000303538 DCAF1Q9Y4B6 1507 aa21.16■□□□□ 0.98
PDS5A-201ENST00000303538 FBXW7Q969H0 707 aa21.16■□□□□ 0.98
PDS5A-201ENST00000303538 SLC4A10Q6U841 1118 aa21.16■□□□□ 0.98
PDS5A-201ENST00000303538 PPP4R2Q9NY27 417 aa21.16■□□□□ 0.98
PDS5A-201ENST00000303538 WWC1Q8IX03 1113 aa21.16■□□□□ 0.98
PDS5A-201ENST00000303538 DCAF8L1A6NGE4 600 aa21.15■□□□□ 0.98
PDS5A-201ENST00000303538 EID1Q9Y6B2 187 aa21.14■□□□□ 0.98
PDS5A-201ENST00000303538 TRIM6-TRIM34B2RNG4 842 aa21.14■□□□□ 0.97
PDS5A-201ENST00000303538 L1TD1Q5T7N2 865 aaKnown RBP21.13■□□□□ 0.97
PDS5A-201ENST00000303538 SYTL4Q96C24 671 aaPredicted RBP21.13■□□□□ 0.97
PDS5A-201ENST00000303538 STK31Q9BXU1 1019 aa21.12■□□□□ 0.97
PDS5A-201ENST00000303538 SPAG9O60271 1321 aaKnown RBP21.11■□□□□ 0.97
PDS5A-201ENST00000303538 IPO8O15397 1037 aaKnown RBP21.11■□□□□ 0.97
PDS5A-201ENST00000303538 RAD21O60216 631 aa21.11■□□□□ 0.97
PDS5A-201ENST00000303538 PPP1R1BQ9UD71 204 aaPredicted RBP21.11■□□□□ 0.97
PDS5A-201ENST00000303538 MSNP26038 577 aaKnown RBP21.11■□□□□ 0.97
PDS5A-201ENST00000303538 MARCH6O60337 910 aa21.1■□□□□ 0.97
PDS5A-201ENST00000303538 AMPHP49418 695 aa21.1■□□□□ 0.97
PDS5A-201ENST00000303538 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
PDS5A-201ENST00000303538 NOL8Q76FK4 1167 aaKnown RBP21.09■□□□□ 0.97
PDS5A-201ENST00000303538 PKD2Q13563 968 aa21.09■□□□□ 0.97
PDS5A-201ENST00000303538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.08■□□□□ 0.972e-6■■□□□ 12.9
PDS5A-201ENST00000303538 NOP58Q9Y2X3 529 aaKnown RBP21.08■□□□□ 0.96
PDS5A-201ENST00000303538 ARID3AQ99856 593 aa21.06■□□□□ 0.96
PDS5A-201ENST00000303538 GPATCH3Q96I76 525 aa21.05■□□□□ 0.96
PDS5A-201ENST00000303538 KIF3BO15066 747 aa21.04■□□□□ 0.96
PDS5A-201ENST00000303538 GZF1Q9H116 711 aaPredicted RBP21.04■□□□□ 0.96
PDS5A-201ENST00000303538 CALD1Q05682 793 aaKnown RBP21.04■□□□□ 0.96
PDS5A-201ENST00000303538 FBXO3Q9UK99 471 aa21.04■□□□□ 0.96
PDS5A-201ENST00000303538 A0A0U1RQG5 324 aaPredicted RBP21.03■□□□□ 0.96
PDS5A-201ENST00000303538 NGEFQ8N5V2 710 aa21.03■□□□□ 0.96
PDS5A-201ENST00000303538 CWC22Q9HCG8 908 aaKnown RBP21.01■□□□□ 0.95
PDS5A-201ENST00000303538 SAMD1Q6SPF0 538 aaPredicted RBP21.01■□□□□ 0.95
PDS5A-201ENST00000303538 ROCK2O75116 1388 aaKnown RBP20.99■□□□□ 0.95
PDS5A-201ENST00000303538 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
PDS5A-201ENST00000303538 SMC4Q9NTJ3 1288 aa20.98■□□□□ 0.95
PDS5A-201ENST00000303538 KTN1Q86UP2 1357 aaKnown RBP20.98■□□□□ 0.95
PDS5A-201ENST00000303538 CCDC146Q8IYE0 955 aa20.98■□□□□ 0.95
PDS5A-201ENST00000303538 CEP89Q96ST8 783 aa20.97■□□□□ 0.95
PDS5A-201ENST00000303538 FOXD4L1Q9NU39 408 aa20.97■□□□□ 0.95
PDS5A-201ENST00000303538 CLUAP1Q96AJ1 413 aa20.97■□□□□ 0.95
PDS5A-201ENST00000303538 HSPA5P11021 654 aaKnown RBP20.97■□□□□ 0.95
PDS5A-201ENST00000303538 SLKQ9H2G2 1235 aaPredicted RBP20.97■□□□□ 0.95
PDS5A-201ENST00000303538 PES1O00541 588 aaKnown RBP20.96■□□□□ 0.95
PDS5A-201ENST00000303538 WASHC2CQ9Y4E1 1318 aa20.96■□□□□ 0.95
PDS5A-201ENST00000303538 HTATSF1O43719 755 aaKnown RBP20.96■□□□□ 0.95
PDS5A-201ENST00000303538 MFAP1P55081 439 aaKnown RBP20.95■□□□□ 0.94
PDS5A-201ENST00000303538 EEA1Q15075 1411 aa20.95■□□□□ 0.94
PDS5A-201ENST00000303538 CNKSR2Q8WXI2 1034 aa20.94■□□□□ 0.94
PDS5A-201ENST00000303538 TPM4P67936 248 aa20.94■□□□□ 0.94
PDS5A-201ENST00000303538 EFCAB2Q5VUJ9 269 aa20.93■□□□□ 0.94
PDS5A-201ENST00000303538 TERF2IPQ9NYB0 399 aa20.93■□□□□ 0.94
PDS5A-201ENST00000303538 CTDP1Q9Y5B0 961 aaPredicted RBP20.93■□□□□ 0.94
PDS5A-201ENST00000303538 FOXD4L5Q5VV16 416 aaPredicted RBP20.93■□□□□ 0.94
PDS5A-201ENST00000303538 FOXD4L4Q8WXT5 416 aaPredicted RBP20.93■□□□□ 0.94
PDS5A-201ENST00000303538 RWDD1Q9H446 243 aaPredicted RBP20.92■□□□□ 0.94
PDS5A-201ENST00000303538 TRIM34Q9BYJ4 488 aa20.92■□□□□ 0.94
PDS5A-201ENST00000303538 CCDC34Q96HJ3 373 aa20.91■□□□□ 0.94
PDS5A-201ENST00000303538 HNRNPMP52272 730 aaKnown RBP eCLIP20.91■□□□□ 0.942e-8■■■■□ 21.6
PDS5A-201ENST00000303538 TCEAL9Q9UHQ7 104 aa20.91■□□□□ 0.94
PDS5A-201ENST00000303538 CEP164Q9UPV0 1460 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms