RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 KIAA0556O60303 1618 aa25.84■■□□□ 1.73
TRABD-201ENST00000303434 GRIN2AQ12879 1464 aa25.81■■□□□ 1.72
TRABD-201ENST00000303434 EIF4G3O43432 1585 aaKnown RBP25.8■■□□□ 1.72
TRABD-201ENST00000303434 TRIM52Q96A61 297 aa25.79■■□□□ 1.72
TRABD-201ENST00000303434 KDM6BO15054 1643 aa25.79■■□□□ 1.72
TRABD-201ENST00000303434 KDM5BQ9UGL1 1544 aa25.78■■□□□ 1.72
TRABD-201ENST00000303434 DENND4BO75064 1496 aaPredicted RBP25.77■■□□□ 1.72
TRABD-201ENST00000303434 NUP153P49790 1475 aaKnown RBP25.75■■□□□ 1.71
TRABD-201ENST00000303434 RAPGEF6Q8TEU7 1601 aa25.74■■□□□ 1.71
TRABD-201ENST00000303434 MPHOSPH9Q99550 1183 aa25.72■■□□□ 1.71
TRABD-201ENST00000303434 ANP32CO43423 234 aa25.71■■□□□ 1.71
TRABD-201ENST00000303434 CCER2I3L3R5 266 aa25.7■■□□□ 1.71
TRABD-201ENST00000303434 DAPK1P53355 1430 aa25.69■■□□□ 1.7
TRABD-201ENST00000303434 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
TRABD-201ENST00000303434 CCDC136Q96JN2 1154 aa25.68■■□□□ 1.7
TRABD-201ENST00000303434 ROCK1Q13464 1354 aa25.67■■□□□ 1.7
TRABD-201ENST00000303434 CHMP7Q8WUX9 453 aaPredicted RBP25.67■■□□□ 1.7
TRABD-201ENST00000303434 DNMT1P26358 1616 aaKnown RBP25.66■■□□□ 1.7
TRABD-201ENST00000303434 ABCC5O15440 1437 aa25.66■■□□□ 1.7
TRABD-201ENST00000303434 ZNF644Q9H582 1327 aaPredicted RBP25.66■■□□□ 1.7
TRABD-201ENST00000303434 NOP58Q9Y2X3 529 aaKnown RBP25.64■■□□□ 1.7
TRABD-201ENST00000303434 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
TRABD-201ENST00000303434 SYNJ2O15056 1496 aa25.63■■□□□ 1.69
TRABD-201ENST00000303434 FOXD1Q16676 465 aa25.59■■□□□ 1.69
TRABD-201ENST00000303434 TROQ12816 1431 aaPredicted RBP25.59■■□□□ 1.69
TRABD-201ENST00000303434 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
TRABD-201ENST00000303434 FBLN2P98095 1184 aa25.58■■□□□ 1.69
TRABD-201ENST00000303434 NBR1Q14596 966 aa25.58■■□□□ 1.69
TRABD-201ENST00000303434 PLB1Q6P1J6 1458 aa25.57■■□□□ 1.68
TRABD-201ENST00000303434 L3MBTL2Q969R5 705 aa25.57■■□□□ 1.68
TRABD-201ENST00000303434 HSPA5P11021 654 aaKnown RBP25.56■■□□□ 1.68
TRABD-201ENST00000303434 ANKRD30BQ9BXX2 1392 aa25.55■■□□□ 1.68
TRABD-201ENST00000303434 JPH4Q96JJ6 628 aa25.54■■□□□ 1.68
TRABD-201ENST00000303434 CFDP1Q9UEE9 299 aaPredicted RBP25.53■■□□□ 1.68
TRABD-201ENST00000303434 CARMIL2Q6F5E8 1435 aa25.52■■□□□ 1.68
TRABD-201ENST00000303434 EIF4G2P78344 907 aaKnown RBP eCLIP25.52■■□□□ 1.68
TRABD-201ENST00000303434 IL27Q8NEV9 243 aa25.52■■□□□ 1.68
TRABD-201ENST00000303434 NUP160Q12769 1436 aa25.51■■□□□ 1.67
TRABD-201ENST00000303434 ITSN2Q9NZM3 1697 aa25.5■■□□□ 1.67
TRABD-201ENST00000303434 WASHC2AQ641Q2 1341 aa25.5■■□□□ 1.67
TRABD-201ENST00000303434 CAMSAP2Q08AD1 1489 aa25.5■■□□□ 1.67
TRABD-201ENST00000303434 GPATCH8Q9UKJ3 1502 aaKnown RBP25.5■■□□□ 1.67
TRABD-201ENST00000303434 SLC4A1APQ9BWU0 796 aaKnown RBP25.49■■□□□ 1.67
TRABD-201ENST00000303434 RPRD2Q5VT52 1461 aaKnown RBP25.49■■□□□ 1.67
TRABD-201ENST00000303434 ADCY10Q96PN6 1610 aa25.49■■□□□ 1.67
TRABD-201ENST00000303434 RTL5Q5HYW3 569 aaPredicted RBP25.48■■□□□ 1.67
TRABD-201ENST00000303434 KIF14Q15058 1648 aa25.47■■□□□ 1.67
TRABD-201ENST00000303434 PPP4R2Q9NY27 417 aa25.45■■□□□ 1.66
TRABD-201ENST00000303434 NCOA1Q15788 1441 aa25.45■■□□□ 1.66
TRABD-201ENST00000303434 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.45■■□□□ 1.66
TRABD-201ENST00000303434 PAK3O75914 559 aaPredicted RBP25.44■■□□□ 1.66
TRABD-201ENST00000303434 ZNF777Q9ULD5 760 aaPredicted RBP25.44■■□□□ 1.66
TRABD-201ENST00000303434 ADGBQ8N7X0 1667 aa25.43■■□□□ 1.66
TRABD-201ENST00000303434 TEX14Q8IWB6 1497 aa25.41■■□□□ 1.66
TRABD-201ENST00000303434 NBPF8Q3BBV2 869 aa25.41■■□□□ 1.66
TRABD-201ENST00000303434 PZPP20742 1482 aa25.4■■□□□ 1.66
TRABD-201ENST00000303434 ADGRL2O95490 1459 aa25.38■■□□□ 1.65
TRABD-201ENST00000303434 CROCC2H7BZ55 1655 aa25.38■■□□□ 1.65
TRABD-201ENST00000303434 PLEKHD1A6NEE1 506 aa25.38■■□□□ 1.65
TRABD-201ENST00000303434 RTN4Q9NQC3 1192 aaKnown RBP25.37■■□□□ 1.65
TRABD-201ENST00000303434 ABCA8O94911 1581 aa25.37■■□□□ 1.65
TRABD-201ENST00000303434 C11orf95C9JLR9 678 aaPredicted RBP25.35■■□□□ 1.65
TRABD-201ENST00000303434 IRX6P78412 446 aaPredicted RBP25.35■■□□□ 1.65
TRABD-201ENST00000303434 ANKRD30AQ9BXX3 1397 aa25.34■■□□□ 1.65
TRABD-201ENST00000303434 ATP10BO94823 1461 aa25.34■■□□□ 1.65
TRABD-201ENST00000303434 CDC42BPAQ5VT25 1732 aa25.33■■□□□ 1.65
TRABD-201ENST00000303434 CNTLNQ9NXG0 1405 aa25.33■■□□□ 1.65
TRABD-201ENST00000303434 CCDC7Q96M83 1385 aa25.32■■□□□ 1.64
TRABD-201ENST00000303434 ABCC10Q5T3U5 1492 aa25.3■■□□□ 1.64
TRABD-201ENST00000303434 KIAA1107Q9UPP5 1409 aa25.29■■□□□ 1.64
TRABD-201ENST00000303434 SPATA31E1Q6ZUB1 1445 aa25.29■■□□□ 1.64
TRABD-201ENST00000303434 CHD1O14646 1710 aa25.29■■□□□ 1.64
TRABD-201ENST00000303434 IPO9Q96P70 1041 aaKnown RBP25.28■■□□□ 1.64
TRABD-201ENST00000303434 ANKRD50Q9ULJ7 1429 aa25.27■■□□□ 1.64
TRABD-201ENST00000303434 PKD2Q13563 968 aa25.26■■□□□ 1.63
TRABD-201ENST00000303434 HNRNPUQ00839 825 aaKnown RBP eCLIP25.24■■□□□ 1.63
TRABD-201ENST00000303434 ANP32AP39687 249 aaKnown RBP25.23■■□□□ 1.63
TRABD-201ENST00000303434 SHANK2Q9UPX8 1470 aa25.22■■□□□ 1.63
TRABD-201ENST00000303434 POLR1AO95602 1720 aaPredicted RBP25.22■■□□□ 1.63
TRABD-201ENST00000303434 C9orf84Q5VXU9 1444 aa25.22■■□□□ 1.63
TRABD-201ENST00000303434 PRKRIP1Q9H875 184 aaPredicted RBP25.21■■□□□ 1.63
TRABD-201ENST00000303434 ZBTB47Q9UFB7 747 aaPredicted RBP25.21■■□□□ 1.63
TRABD-201ENST00000303434 MBD5Q9P267 1494 aa25.2■■□□□ 1.63
TRABD-201ENST00000303434 KIF7Q2M1P5 1343 aa25.2■■□□□ 1.63
TRABD-201ENST00000303434 PTPRGP23470 1445 aa25.2■■□□□ 1.62
TRABD-201ENST00000303434 TSPY4P0CV99 314 aa25.19■■□□□ 1.62
TRABD-201ENST00000303434 TSPY10P0CW01 314 aa25.19■■□□□ 1.62
TRABD-201ENST00000303434 CCDC184Q52MB2 194 aa25.18■■□□□ 1.62
TRABD-201ENST00000303434 NUP155O75694 1391 aa25.17■■□□□ 1.62
TRABD-201ENST00000303434 PKNOX2Q96KN3 472 aa25.17■■□□□ 1.62
TRABD-201ENST00000303434 WASHC2CQ9Y4E1 1318 aa25.16■■□□□ 1.62
TRABD-201ENST00000303434 HNRNPMP52272 730 aaKnown RBP eCLIP25.15■■□□□ 1.625e-6■■■□□ 17.5
TRABD-201ENST00000303434 USP35Q9P2H5 1018 aa25.15■■□□□ 1.62
TRABD-201ENST00000303434 B4GALNT3Q6L9W6 998 aa25.14■■□□□ 1.61
TRABD-201ENST00000303434 EIF5BO60841 1220 aaKnown RBP25.13■■□□□ 1.61
TRABD-201ENST00000303434 ARHGEF5Q12774 1597 aa25.12■■□□□ 1.61
TRABD-201ENST00000303434 ZNF326Q5BKZ1 582 aaKnown RBP25.12■■□□□ 1.61
TRABD-201ENST00000303434 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
TRABD-201ENST00000303434 KDM5DQ9BY66 1539 aa25.1■■□□□ 1.61
TRABD-201ENST00000303434 USP47Q96K76 1375 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms